Protein–RNA interactions for Protein: Q61466

Smarcd1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 1, mousemouse

Known RBP Predictions only

Length 515 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcd1Q61466 Gm42802-201ENSMUST00000202475 456 ntTSL 2 BASIC16.15■□□□□ 0.18
Smarcd1Q61466 Stox2-208ENSMUST00000211737 4573 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Smarcd1Q61466 Timm9-205ENSMUST00000221178 529 ntTSL 3 BASIC16.15■□□□□ 0.18
Smarcd1Q61466 Pla2g10-201ENSMUST00000023364 1423 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Smarcd1Q61466 Ndufv2-201ENSMUST00000024909 927 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Smarcd1Q61466 Tamm41-201ENSMUST00000032461 1168 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Smarcd1Q61466 Nudt3-202ENSMUST00000062397 558 ntTSL 3 BASIC16.15■□□□□ 0.18
Smarcd1Q61466 Commd5-201ENSMUST00000068407 1037 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Smarcd1Q61466 Tex261-201ENSMUST00000014892 2984 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Smarcd1Q61466 Sphk1-201ENSMUST00000063396 2659 ntAPPRIS ALT2 TSL 2 BASIC16.15■□□□□ 0.18
Smarcd1Q61466 Mkrn3-201ENSMUST00000094340 2547 ntAPPRIS P1 BASIC16.15■□□□□ 0.18
Smarcd1Q61466 Sfxn4-203ENSMUST00000135808 1309 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Smarcd1Q61466 Mag-203ENSMUST00000187137 2434 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Smarcd1Q61466 Mbp-206ENSMUST00000102812 2108 ntAPPRIS ALT2 TSL 2 BASIC16.15■□□□□ 0.18
Smarcd1Q61466 Rnf220-203ENSMUST00000102690 1842 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Smarcd1Q61466 Chst3-203ENSMUST00000167915 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.18
Smarcd1Q61466 Pdhb-201ENSMUST00000022268 1513 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.18
Smarcd1Q61466 Pcsk6-201ENSMUST00000055576 4405 ntAPPRIS P3 TSL 5 BASIC16.14■□□□□ 0.17
Smarcd1Q61466 Lancl1-203ENSMUST00000119559 1385 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Smarcd1Q61466 Slc35a1-201ENSMUST00000029970 2039 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Smarcd1Q61466 Arf2-202ENSMUST00000063347 2660 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Smarcd1Q61466 Alpl-201ENSMUST00000030551 2522 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Smarcd1Q61466 A230060F14Rik-202ENSMUST00000190739 1889 ntBASIC16.14■□□□□ 0.17
Smarcd1Q61466 Pacs1-201ENSMUST00000025786 4339 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Smarcd1Q61466 Hbegf-201ENSMUST00000025363 2373 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Smarcd1Q61466 Tyro3-201ENSMUST00000028763 3989 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
Smarcd1Q61466 Gm11453-201ENSMUST00000117318 1007 ntBASIC16.14■□□□□ 0.17
Smarcd1Q61466 Rpl36-ps8-201ENSMUST00000121187 315 ntBASIC16.14■□□□□ 0.17
Smarcd1Q61466 Gm12260-201ENSMUST00000122447 411 ntBASIC16.14■□□□□ 0.17
Smarcd1Q61466 Pcp2-205ENSMUST00000142431 524 ntTSL 2 BASIC16.14■□□□□ 0.17
Smarcd1Q61466 Gm9727-201ENSMUST00000161387 555 ntBASIC16.14■□□□□ 0.17
Smarcd1Q61466 Gm30097-202ENSMUST00000194580 329 ntTSL 3 BASIC16.14■□□□□ 0.17
Smarcd1Q61466 Rpl31-205ENSMUST00000194746 703 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Smarcd1Q61466 Cdkn2d-201ENSMUST00000086374 1264 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Smarcd1Q61466 Nploc4-202ENSMUST00000103017 4025 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Smarcd1Q61466 Rcbtb2-226ENSMUST00000171767 2692 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Smarcd1Q61466 Gtf3c4-204ENSMUST00000171404 7127 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Smarcd1Q61466 1700034J05Rik-202ENSMUST00000111622 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Smarcd1Q61466 Alx1-204ENSMUST00000217946 1542 ntTSL 5 BASIC16.14■□□□□ 0.17
Smarcd1Q61466 Stx6-201ENSMUST00000027743 4589 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Smarcd1Q61466 Stxbp6-201ENSMUST00000053768 4553 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
Smarcd1Q61466 Clgn-202ENSMUST00000109831 2293 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Smarcd1Q61466 Ntng1-203ENSMUST00000106570 1386 ntTSL 5 BASIC16.13■□□□□ 0.17
Smarcd1Q61466 Majin-202ENSMUST00000113528 1562 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Smarcd1Q61466 H2-K1-201ENSMUST00000025181 1605 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
Smarcd1Q61466 Col11a2-201ENSMUST00000087497 6048 ntAPPRIS P2 TSL 2 BASIC16.13■□□□□ 0.17
Smarcd1Q61466 Letm2-208ENSMUST00000210616 2974 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Smarcd1Q61466 Gfm2-211ENSMUST00000161913 1829 ntTSL 2 BASIC16.13■□□□□ 0.17
Smarcd1Q61466 Prr23a3-201ENSMUST00000167951 1817 ntAPPRIS P1 BASIC16.13■□□□□ 0.17
Smarcd1Q61466 Thap7-201ENSMUST00000100125 1248 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Smarcd1Q61466 1110004F10Rik-203ENSMUST00000106608 927 ntTSL 3 BASIC16.13■□□□□ 0.17
Smarcd1Q61466 Higd1b-202ENSMUST00000107072 497 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
Smarcd1Q61466 Higd1b-203ENSMUST00000107073 530 ntAPPRIS P1 TSL 2 BASIC16.13■□□□□ 0.17
Smarcd1Q61466 Gm11906-201ENSMUST00000124792 680 ntTSL 5 BASIC16.13■□□□□ 0.17
Smarcd1Q61466 0610025J13Rik-201ENSMUST00000131324 652 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Smarcd1Q61466 Triqk-201ENSMUST00000143186 888 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Smarcd1Q61466 Gm27300-201ENSMUST00000184085 97 ntBASIC16.13■□□□□ 0.17
Smarcd1Q61466 Gm27335-201ENSMUST00000184758 97 ntBASIC16.13■□□□□ 0.17
Smarcd1Q61466 Gm8000-201ENSMUST00000188378 592 ntBASIC16.13■□□□□ 0.17
Smarcd1Q61466 Higd1b-201ENSMUST00000021302 735 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Smarcd1Q61466 AC157650.3-201ENSMUST00000225058 1476 ntBASIC16.13■□□□□ 0.17
Smarcd1Q61466 Gm45412-201ENSMUST00000210217 2275 ntBASIC16.13■□□□□ 0.17
Smarcd1Q61466 Ube2j2-201ENSMUST00000024056 3483 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Smarcd1Q61466 Tcf3-207ENSMUST00000105343 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Smarcd1Q61466 Cuedc2-202ENSMUST00000167861 1941 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
Smarcd1Q61466 Ror1-201ENSMUST00000039630 5762 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Smarcd1Q61466 Acbd5-206ENSMUST00000155602 1714 ntAPPRIS ALT2 TSL 2 BASIC16.13■□□□□ 0.17
Smarcd1Q61466 Gm38318-201ENSMUST00000195769 1706 ntBASIC16.13■□□□□ 0.17
Smarcd1Q61466 Lmna-202ENSMUST00000036252 1536 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Smarcd1Q61466 Mis18a-201ENSMUST00000099554 1333 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Smarcd1Q61466 Gbx1-201ENSMUST00000088311 3475 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Smarcd1Q61466 Zranb2-203ENSMUST00000106058 2924 ntAPPRIS P2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Smarcd1Q61466 Lck-202ENSMUST00000102596 2111 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Smarcd1Q61466 Stambp-206ENSMUST00000206400 2144 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Smarcd1Q61466 Slc44a2-210ENSMUST00000217461 3478 ntAPPRIS ALT1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Smarcd1Q61466 App-207ENSMUST00000227737 2827 ntBASIC16.12■□□□□ 0.17
Smarcd1Q61466 Phtf1-202ENSMUST00000063717 3327 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Smarcd1Q61466 Ankrd13b-201ENSMUST00000037593 3105 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Smarcd1Q61466 Gm11779-201ENSMUST00000118541 368 ntBASIC16.12■□□□□ 0.17
Smarcd1Q61466 Uqcc2-203ENSMUST00000119227 452 ntTSL 3 BASIC16.12■□□□□ 0.17
Smarcd1Q61466 E530001F21Rik-201ENSMUST00000120991 730 ntBASIC16.12■□□□□ 0.17
Smarcd1Q61466 Rpl39l-202ENSMUST00000121292 550 ntAPPRIS P1 TSL 2 BASIC16.12■□□□□ 0.17
Smarcd1Q61466 A230065H16Rik-201ENSMUST00000150384 670 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Smarcd1Q61466 Mcub-204ENSMUST00000153506 1005 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Smarcd1Q61466 Caly-202ENSMUST00000166758 1220 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Smarcd1Q61466 1600014C10Rik-209ENSMUST00000179992 568 ntTSL 3 BASIC16.12■□□□□ 0.17
Smarcd1Q61466 Gm26756-201ENSMUST00000181689 1294 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Smarcd1Q61466 Rpsa-ps1-201ENSMUST00000191040 886 ntBASIC16.12■□□□□ 0.17
Smarcd1Q61466 Rnf7-202ENSMUST00000071301 334 ntTSL 2 BASIC16.12■□□□□ 0.17
Smarcd1Q61466 Cdpf1-201ENSMUST00000071876 997 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Smarcd1Q61466 Tmem184b-201ENSMUST00000074991 3361 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Smarcd1Q61466 Arntl2-204ENSMUST00000111639 2923 ntAPPRIS P3 TSL 5 BASIC16.12■□□□□ 0.17
Smarcd1Q61466 Shank1-201ENSMUST00000107934 6477 ntAPPRIS ALT2 TSL 5 BASIC16.12■□□□□ 0.17
Smarcd1Q61466 Gnal-201ENSMUST00000025402 5616 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Smarcd1Q61466 Il11ra1-202ENSMUST00000108040 1837 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
Smarcd1Q61466 Rps6ka1-201ENSMUST00000003741 3085 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Smarcd1Q61466 AC131586.3-201ENSMUST00000228355 1367 ntBASIC16.12■□□□□ 0.17
Smarcd1Q61466 Cldn11-201ENSMUST00000046174 1870 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Smarcd1Q61466 Msantd3-202ENSMUST00000064807 1378 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Smarcd1Q61466 Cyp2d10-201ENSMUST00000072776 1647 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Retrieved 100 of 76,532 protein–RNA pairs in 21.1 ms