Protein–RNA interactions for Protein: Q61371

Ift88, Intraflagellar transport protein 88 homolog, mousemouse

Predictions only

Length 824 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ift88Q61371 Mafg-204ENSMUST00000106182 1104 ntAPPRIS P1 TSL 2 BASIC17.2■□□□□ 0.34
Ift88Q61371 Gm11950-201ENSMUST00000121615 838 ntBASIC17.2■□□□□ 0.34
Ift88Q61371 Gm12973-201ENSMUST00000143967 607 ntTSL 5 BASIC17.2■□□□□ 0.34
Ift88Q61371 Gm25406-201ENSMUST00000157599 105 ntBASIC17.2■□□□□ 0.34
Ift88Q61371 4932443I19Rik-204ENSMUST00000214337 1212 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
Ift88Q61371 AC122465.1-201ENSMUST00000220813 1209 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Ift88Q61371 Tle2-205ENSMUST00000135211 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Ift88Q61371 Exoc6-201ENSMUST00000066439 2729 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Ift88Q61371 Cblb-201ENSMUST00000114471 6648 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Ift88Q61371 Chd3-201ENSMUST00000092971 6066 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
Ift88Q61371 D630044L22Rik-201ENSMUST00000181174 2964 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Ift88Q61371 Ovol2-202ENSMUST00000103171 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Ift88Q61371 Bahd1-201ENSMUST00000036578 4594 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Ift88Q61371 App-202ENSMUST00000226232 3120 ntAPPRIS ALT2 BASIC17.2■□□□□ 0.34
Ift88Q61371 Ppil1-201ENSMUST00000024802 1434 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Ift88Q61371 Snrpd2-201ENSMUST00000049294 1420 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Ift88Q61371 Plch2-212ENSMUST00000186598 2119 ntTSL 5 BASIC17.2■□□□□ 0.34
Ift88Q61371 Kif12-201ENSMUST00000030042 2250 ntAPPRIS P2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Ift88Q61371 Sgta-202ENSMUST00000218208 1964 ntAPPRIS ALT1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Ift88Q61371 Wfikkn1-201ENSMUST00000095487 1981 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Ift88Q61371 Ccbe1-202ENSMUST00000130300 1631 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Ift88Q61371 Gm43598-201ENSMUST00000202482 2479 ntBASIC17.19■□□□□ 0.34
Ift88Q61371 Baz1b-201ENSMUST00000002825 6492 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Ift88Q61371 Eml5-210ENSMUST00000223282 7595 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
Ift88Q61371 Gm20878-202ENSMUST00000108028 339 ntAPPRIS ALT2 TSL 5 BASIC17.19■□□□□ 0.34
Ift88Q61371 Tlcd2-202ENSMUST00000108435 1112 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Ift88Q61371 Trmt112-202ENSMUST00000116551 985 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Ift88Q61371 Gas5-203ENSMUST00000159119 665 ntTSL 5 BASIC17.19■□□□□ 0.34
Ift88Q61371 Gm8349-201ENSMUST00000182720 1003 ntBASIC17.19■□□□□ 0.34
Ift88Q61371 Gm10830-201ENSMUST00000186379 636 ntTSL 5 BASIC17.19■□□□□ 0.34
Ift88Q61371 Mrpl36-202ENSMUST00000221730 717 ntAPPRIS P1 TSL 3 BASIC17.19■□□□□ 0.34
Ift88Q61371 Tpbg-201ENSMUST00000006559 3603 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Ift88Q61371 Unc93b1-203ENSMUST00000162708 2266 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
Ift88Q61371 Vps37c-201ENSMUST00000087951 2415 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Ift88Q61371 Adcy1-201ENSMUST00000020706 12259 ntAPPRIS P1 TSL 2 BASIC17.19■□□□□ 0.34
Ift88Q61371 Rbfox3-205ENSMUST00000117731 3084 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Ift88Q61371 Efemp2-204ENSMUST00000165485 1557 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Ift88Q61371 Dcakd-201ENSMUST00000021313 1744 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Ift88Q61371 Gm13285-201ENSMUST00000179725 1462 ntAPPRIS P1 BASIC17.18■□□□□ 0.34
Ift88Q61371 Ldb3-208ENSMUST00000228044 1883 ntAPPRIS ALT2 BASIC17.18■□□□□ 0.34
Ift88Q61371 Mrc2-202ENSMUST00000100335 5795 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Ift88Q61371 Gm16759-201ENSMUST00000126238 1393 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Ift88Q61371 Gtpbp3-201ENSMUST00000007754 2800 ntAPPRIS P2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Ift88Q61371 Cr1l-208ENSMUST00000194111 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Ift88Q61371 Gng2-202ENSMUST00000159028 458 ntAPPRIS P1 TSL 2 BASIC17.18■□□□□ 0.34
Ift88Q61371 Gm29246-201ENSMUST00000189221 349 ntTSL 3 BASIC17.18■□□□□ 0.34
Ift88Q61371 Gm45328-201ENSMUST00000210942 917 ntBASIC17.18■□□□□ 0.34
Ift88Q61371 Fgfr1op2-203ENSMUST00000067404 2766 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Ift88Q61371 Rbm26-203ENSMUST00000163499 4212 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Ift88Q61371 Pacs2-201ENSMUST00000084891 5480 ntAPPRIS P2 TSL 5 BASIC17.18■□□□□ 0.34
Ift88Q61371 Sik1-201ENSMUST00000024839 4511 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Ift88Q61371 Denr-201ENSMUST00000023869 2339 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Ift88Q61371 Sppl2b-201ENSMUST00000035597 2869 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Ift88Q61371 Hnrnpul1-205ENSMUST00000206832 3784 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Ift88Q61371 Hmgn2-204ENSMUST00000105893 973 ntTSL 3 BASIC17.17■□□□□ 0.34
Ift88Q61371 Arrdc4-202ENSMUST00000118110 1129 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Ift88Q61371 Slc25a51-203ENSMUST00000132815 1005 ntAPPRIS P1 TSL 2 BASIC17.17■□□□□ 0.34
Ift88Q61371 Icam4-202ENSMUST00000215077 1028 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Ift88Q61371 Mgarp-201ENSMUST00000038154 1232 ntAPPRIS P2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Ift88Q61371 Lrrc56-201ENSMUST00000047093 2197 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
Ift88Q61371 Gm8258-201ENSMUST00000055593 1449 ntBASIC17.17■□□□□ 0.34
Ift88Q61371 Snapc3-202ENSMUST00000071544 942 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Ift88Q61371 Taar2-201ENSMUST00000079134 1020 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Ift88Q61371 Romo1-201ENSMUST00000088610 569 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Ift88Q61371 Prrt2-201ENSMUST00000159916 2501 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
Ift88Q61371 Arhgap44-201ENSMUST00000047463 4074 ntAPPRIS P2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Ift88Q61371 Tpm1-215ENSMUST00000113705 1759 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Ift88Q61371 Camsap1-201ENSMUST00000091268 7978 ntAPPRIS ALT2 TSL 5 BASIC17.17■□□□□ 0.34
Ift88Q61371 Ckb-201ENSMUST00000001304 1472 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Ift88Q61371 Tmem108-204ENSMUST00000189588 2850 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Ift88Q61371 Cyp2ab1-201ENSMUST00000023513 2720 ntTSL 5 BASIC17.17■□□□□ 0.34
Ift88Q61371 Notch3-201ENSMUST00000087723 8044 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Ift88Q61371 Igfbp2-201ENSMUST00000047328 1307 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Ift88Q61371 Cab39-202ENSMUST00000113360 3805 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Ift88Q61371 Gdf3-201ENSMUST00000032211 2125 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Ift88Q61371 Spdef-201ENSMUST00000025054 1824 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Ift88Q61371 Ints10-203ENSMUST00000110241 2322 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Ift88Q61371 Dmkn-202ENSMUST00000054427 2034 ntAPPRIS ALT2 TSL 5 BASIC17.16■□□□□ 0.34
Ift88Q61371 Gm13034-201ENSMUST00000121342 3177 ntBASIC17.16■□□□□ 0.34
Ift88Q61371 Galnt18-202ENSMUST00000106663 2530 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Ift88Q61371 Hnf4a-201ENSMUST00000018094 4356 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Ift88Q61371 Bbs10-201ENSMUST00000040454 2744 ntAPPRIS P1 TSL 2 BASIC17.16■□□□□ 0.34
Ift88Q61371 Jdp2-202ENSMUST00000171754 1559 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Ift88Q61371 Ric8b-201ENSMUST00000038523 3069 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Ift88Q61371 Dnajc2-203ENSMUST00000115193 2416 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Ift88Q61371 Flywch1-202ENSMUST00000086325 2443 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Ift88Q61371 Gm14261-201ENSMUST00000145105 1429 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Ift88Q61371 Tmem60-201ENSMUST00000115259 1147 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Ift88Q61371 Gm13312-201ENSMUST00000119631 718 ntBASIC17.16■□□□□ 0.34
Ift88Q61371 Gm13830-201ENSMUST00000124378 417 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Ift88Q61371 Bola2-203ENSMUST00000130498 1266 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Ift88Q61371 Pantr2-201ENSMUST00000180589 463 ntTSL 3 BASIC17.16■□□□□ 0.34
Ift88Q61371 Snrpf-201ENSMUST00000020203 861 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Ift88Q61371 4732471J01Rik-202ENSMUST00000205787 991 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Ift88Q61371 Hint2-201ENSMUST00000030192 610 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Ift88Q61371 Cdhr5-201ENSMUST00000080654 2133 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
Ift88Q61371 Acss3-201ENSMUST00000044668 2494 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Ift88Q61371 Gnb2-203ENSMUST00000111023 1471 ntTSL 5 BASIC17.16■□□□□ 0.34
Ift88Q61371 Bnipl-202ENSMUST00000107195 1810 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Ift88Q61371 Pptc7-202ENSMUST00000119015 2233 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Retrieved 100 of 76,532 protein–RNA pairs in 77.9 ms