Protein–RNA interactions for Protein: Q61321

Six4, Homeobox protein SIX4, mousemouse

Predictions only

Length 775 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Six4Q61321 Atf3-201ENSMUST00000027941 1984 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Six4Q61321 Bnc1-201ENSMUST00000026096 4646 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Six4Q61321 Espnl-202ENSMUST00000176156 2886 ntTSL 5 BASIC15.65■□□□□ 0.1
Six4Q61321 Stk11-202ENSMUST00000105370 1474 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Six4Q61321 Nrip2-202ENSMUST00000120405 1468 ntTSL 2 BASIC15.65■□□□□ 0.1
Six4Q61321 Cyfip2-205ENSMUST00000165599 6659 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Six4Q61321 Mbd6-201ENSMUST00000026476 4165 ntAPPRIS P3 TSL 5 BASIC15.65■□□□□ 0.1
Six4Q61321 Gm45188-201ENSMUST00000207592 1369 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Six4Q61321 Gfm2-211ENSMUST00000161913 1829 ntTSL 2 BASIC15.64■□□□□ 0.09
Six4Q61321 Tnnt1-203ENSMUST00000108587 1059 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Six4Q61321 Majin-202ENSMUST00000113528 1562 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Six4Q61321 Myo5a-214ENSMUST00000155282 6372 ntAPPRIS P5 TSL 5 BASIC15.64■□□□□ 0.09
Six4Q61321 Gm42413-201ENSMUST00000196216 338 ntTSL 5 BASIC15.64■□□□□ 0.09
Six4Q61321 Gm9449-201ENSMUST00000207265 1011 ntBASIC15.64■□□□□ 0.09
Six4Q61321 2210406O10Rik-201ENSMUST00000044964 937 ntTSL 5 BASIC15.64■□□□□ 0.09
Six4Q61321 Timm8a2-201ENSMUST00000045976 913 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Six4Q61321 Sdhc-201ENSMUST00000081560 815 ntTSL 3 BASIC15.64■□□□□ 0.09
Six4Q61321 Gclc-201ENSMUST00000034905 3423 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Six4Q61321 Tcf3-210ENSMUST00000105346 2839 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Six4Q61321 Gpr3-202ENSMUST00000105911 2518 ntAPPRIS P1 BASIC15.64■□□□□ 0.09
Six4Q61321 Miip-206ENSMUST00000172710 1769 ntAPPRIS P2 TSL 5 BASIC15.64■□□□□ 0.09
Six4Q61321 4933433G15Rik-201ENSMUST00000180533 1481 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Six4Q61321 Plcxd1-201ENSMUST00000086687 1346 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Six4Q61321 Gtdc1-202ENSMUST00000100127 2422 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Six4Q61321 Rbck1-201ENSMUST00000028964 2252 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Six4Q61321 Nap1l5-201ENSMUST00000059539 1844 ntAPPRIS P1 BASIC15.64■□□□□ 0.09
Six4Q61321 Rpn2-201ENSMUST00000029171 2621 ntTSL 5 BASIC15.64■□□□□ 0.09
Six4Q61321 Arsi-201ENSMUST00000040359 2975 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Six4Q61321 Nat8l-201ENSMUST00000056355 6529 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Six4Q61321 Pus1-204ENSMUST00000112426 1389 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Six4Q61321 Galnt6os-201ENSMUST00000160960 1389 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Six4Q61321 P2rx6-203ENSMUST00000171002 1353 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Six4Q61321 Gstt2-201ENSMUST00000038257 1370 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Six4Q61321 Rcn2-201ENSMUST00000114276 2024 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Six4Q61321 Chpf-201ENSMUST00000079205 2892 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Six4Q61321 Smad3-201ENSMUST00000034973 5090 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Six4Q61321 Gm16279-201ENSMUST00000149452 2945 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Six4Q61321 Adam15-202ENSMUST00000074582 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
Six4Q61321 Il11ra2-201ENSMUST00000108006 1299 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Six4Q61321 Gm15939-201ENSMUST00000160756 2147 ntTSL 5 BASIC15.63■□□□□ 0.09
Six4Q61321 Tbc1d7-202ENSMUST00000179852 1246 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Six4Q61321 Dusp13-208ENSMUST00000183698 1019 ntTSL 5 BASIC15.63■□□□□ 0.09
Six4Q61321 Urah-204ENSMUST00000185612 716 ntAPPRIS P3 TSL 3 BASIC15.63■□□□□ 0.09
Six4Q61321 Gm37153-201ENSMUST00000193637 231 ntBASIC15.63■□□□□ 0.09
Six4Q61321 Gm10419-203ENSMUST00000197854 653 ntTSL 5 BASIC15.63■□□□□ 0.09
Six4Q61321 Gm45144-201ENSMUST00000207473 354 ntTSL 5 BASIC15.63■□□□□ 0.09
Six4Q61321 Gm18195-201ENSMUST00000207604 706 ntBASIC15.63■□□□□ 0.09
Six4Q61321 Urah-207ENSMUST00000211372 688 ntAPPRIS P3 TSL 2 BASIC15.63■□□□□ 0.09
Six4Q61321 AV026068-213ENSMUST00000223675 1171 ntBASIC15.63■□□□□ 0.09
Six4Q61321 AC147366.1-201ENSMUST00000227671 852 ntBASIC15.63■□□□□ 0.09
Six4Q61321 Urah-201ENSMUST00000026554 890 ntAPPRIS P3 TSL 1 (best) BASIC15.63■□□□□ 0.09
Six4Q61321 Izumo1r-201ENSMUST00000034409 1291 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Six4Q61321 Lce1l-201ENSMUST00000054426 670 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Six4Q61321 Ly6k-201ENSMUST00000060301 791 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Six4Q61321 Hps5-202ENSMUST00000107653 4702 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
Six4Q61321 Aldh1a3-203ENSMUST00000174209 1496 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Six4Q61321 Slc6a11-201ENSMUST00000032451 4132 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Six4Q61321 Slc22a7-201ENSMUST00000087012 2007 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Six4Q61321 Derl3-202ENSMUST00000217811 1316 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
Six4Q61321 Ssu2-201ENSMUST00000060847 1321 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Six4Q61321 Eml3-202ENSMUST00000224272 2978 ntAPPRIS ALT2 BASIC15.63■□□□□ 0.09
Six4Q61321 Nodal-201ENSMUST00000049339 2095 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Six4Q61321 Car10-205ENSMUST00000107861 2613 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Six4Q61321 Gm37711-201ENSMUST00000194907 1749 ntTSL 5 BASIC15.63■□□□□ 0.09
Six4Q61321 Cxxc5-201ENSMUST00000060722 2271 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Six4Q61321 Acvrl1-204ENSMUST00000120028 1932 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Six4Q61321 Ube2d3-208ENSMUST00000197134 2493 ntAPPRIS ALT1 TSL 5 BASIC15.62■□□□□ 0.09
Six4Q61321 Tex264-201ENSMUST00000046735 1391 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Six4Q61321 Sacs-204ENSMUST00000121091 4581 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
Six4Q61321 Ppfia3-207ENSMUST00000211067 4565 ntAPPRIS P1 TSL 5 BASIC15.62■□□□□ 0.09
Six4Q61321 Gm45351-201ENSMUST00000210683 2545 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Six4Q61321 Crem-234ENSMUST00000154470 1996 ntTSL 5 BASIC15.62■□□□□ 0.09
Six4Q61321 Xiap-203ENSMUST00000115094 6542 ntAPPRIS P1 TSL 5 BASIC15.62■□□□□ 0.09
Six4Q61321 Gm10564-201ENSMUST00000097750 3113 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Six4Q61321 Nploc4-201ENSMUST00000044271 4121 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Six4Q61321 Tead2-203ENSMUST00000107801 3396 ntAPPRIS P3 TSL 1 (best) BASIC15.62■□□□□ 0.09
Six4Q61321 Gm11467-201ENSMUST00000129407 674 ntTSL 3 BASIC15.62■□□□□ 0.09
Six4Q61321 Prr3-202ENSMUST00000165613 767 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Six4Q61321 H2-T-ps-201ENSMUST00000172538 1067 ntBASIC15.62■□□□□ 0.09
Six4Q61321 Gm8318-201ENSMUST00000182954 872 ntBASIC15.62■□□□□ 0.09
Six4Q61321 Gm2651-201ENSMUST00000203560 838 ntBASIC15.62■□□□□ 0.09
Six4Q61321 AC140264.2-201ENSMUST00000219668 289 ntTSL 2 BASIC15.62■□□□□ 0.09
Six4Q61321 Olfr30-201ENSMUST00000055204 1066 ntAPPRIS P1 BASIC15.62■□□□□ 0.09
Six4Q61321 Bhlha9-201ENSMUST00000056184 1207 ntAPPRIS P1 BASIC15.62■□□□□ 0.09
Six4Q61321 Gyg-203ENSMUST00000178328 1698 ntAPPRIS P2 TSL 1 (best) BASIC15.62■□□□□ 0.09
Six4Q61321 A230060F14Rik-202ENSMUST00000190739 1889 ntBASIC15.62■□□□□ 0.09
Six4Q61321 Dffb-201ENSMUST00000030893 2093 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Six4Q61321 Slc5a5-201ENSMUST00000000809 2928 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Six4Q61321 Hacd3-201ENSMUST00000036615 2709 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Six4Q61321 Unc13b-201ENSMUST00000079978 6354 ntAPPRIS P2 TSL 5 BASIC15.62■□□□□ 0.09
Six4Q61321 Irf7-201ENSMUST00000026571 1916 ntAPPRIS P3 TSL 1 (best) BASIC15.62■□□□□ 0.09
Six4Q61321 Gm26547-201ENSMUST00000181186 1508 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Six4Q61321 Itga5-201ENSMUST00000023128 4382 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Six4Q61321 A830018L16Rik-201ENSMUST00000048613 2779 ntAPPRIS P3 TSL 1 (best) BASIC15.62■□□□□ 0.09
Six4Q61321 Nlk-201ENSMUST00000142739 4444 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Six4Q61321 Ifitm10-201ENSMUST00000059223 3412 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Six4Q61321 Arhgef10l-201ENSMUST00000039204 4493 ntAPPRIS P4 TSL 1 (best) BASIC15.62■□□□□ 0.09
Six4Q61321 Tmx4-203ENSMUST00000110120 2602 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
Six4Q61321 Msl1-201ENSMUST00000037915 4593 ntAPPRIS P2 TSL 1 (best) BASIC15.61■□□□□ 0.09
Six4Q61321 Ankrd17-203ENSMUST00000168058 9311 ntAPPRIS ALT2 TSL 5 BASIC15.61■□□□□ 0.09
Retrieved 100 of 76,532 protein–RNA pairs in 19.2 ms