Protein–RNA interactions for Protein: Q61189

Clns1a, Methylosome subunit pICln, mousemouse

Predictions only

Length 236 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clns1aQ61189 Ndufa12-201ENSMUST00000020209 1110 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Clns1aQ61189 AC175538.1-201ENSMUST00000225343 1269 ntBASIC13.32□□□□□ -0.28
Clns1aQ61189 Arsi-201ENSMUST00000040359 2975 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Clns1aQ61189 Nlrx1-203ENSMUST00000169651 3621 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Clns1aQ61189 Ttc22-201ENSMUST00000047922 2554 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Clns1aQ61189 Cep19-202ENSMUST00000115168 1718 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Clns1aQ61189 Zmym4-201ENSMUST00000106108 7102 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Clns1aQ61189 Fxyd3-205ENSMUST00000167369 2894 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Clns1aQ61189 Ankrd13b-202ENSMUST00000092892 3336 ntAPPRIS P2 TSL 5 BASIC13.32□□□□□ -0.28
Clns1aQ61189 Cnksr2-202ENSMUST00000112513 4471 ntTSL 5 BASIC13.32□□□□□ -0.28
Clns1aQ61189 Irf3-201ENSMUST00000003284 2031 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Clns1aQ61189 Ctnnd2-203ENSMUST00000226119 4111 ntAPPRIS ALT2 BASIC13.32□□□□□ -0.28
Clns1aQ61189 Ttyh1-203ENSMUST00000119661 2512 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Clns1aQ61189 Lipo3-202ENSMUST00000112508 2839 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Clns1aQ61189 Slc41a3-202ENSMUST00000044019 2412 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Clns1aQ61189 Sdsl-201ENSMUST00000031594 1476 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Clns1aQ61189 Kif21b-201ENSMUST00000075164 9115 ntAPPRIS P1 TSL 2 BASIC13.31□□□□□ -0.28
Clns1aQ61189 Actg1-202ENSMUST00000071555 1952 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Clns1aQ61189 Jam2-201ENSMUST00000098407 1998 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Clns1aQ61189 Chd1l-201ENSMUST00000029730 3008 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Clns1aQ61189 Ndufaf8-201ENSMUST00000106223 781 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Clns1aQ61189 Gm15908-201ENSMUST00000154345 1091 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Clns1aQ61189 Ascl5-201ENSMUST00000180436 567 ntAPPRIS P1 BASIC13.31□□□□□ -0.28
Clns1aQ61189 Rgcc-201ENSMUST00000022595 918 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Clns1aQ61189 AC156016.1-201ENSMUST00000227190 1035 ntBASIC13.31□□□□□ -0.28
Clns1aQ61189 Irak1bp1-201ENSMUST00000034783 1159 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Clns1aQ61189 Sohlh1-201ENSMUST00000076989 1289 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Clns1aQ61189 Rad51d-203ENSMUST00000092844 1228 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Clns1aQ61189 Sorbs1-225ENSMUST00000226047 2582 ntAPPRIS ALT2 BASIC13.31□□□□□ -0.28
Clns1aQ61189 Slc43a3-201ENSMUST00000090726 2583 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Clns1aQ61189 Ttll5-203ENSMUST00000095536 4150 ntAPPRIS ALT2 TSL 2 BASIC13.31□□□□□ -0.28
Clns1aQ61189 Slc16a9-201ENSMUST00000046807 3756 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Clns1aQ61189 Vldlr-202ENSMUST00000047645 3260 ntTSL 5 BASIC13.31□□□□□ -0.28
Clns1aQ61189 Sptb-201ENSMUST00000021458 10394 ntAPPRIS P2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Clns1aQ61189 Phka1-204ENSMUST00000119229 6025 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
Clns1aQ61189 Smtnl2-202ENSMUST00000108500 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Clns1aQ61189 Pex16-201ENSMUST00000028650 1392 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Clns1aQ61189 Adam22-207ENSMUST00000115388 9161 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
Clns1aQ61189 Gm29676-201ENSMUST00000222396 1689 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Clns1aQ61189 Kdm5c-202ENSMUST00000112584 5900 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
Clns1aQ61189 Gm2788-204ENSMUST00000209288 1966 ntTSL 5 BASIC13.31□□□□□ -0.28
Clns1aQ61189 Fbln1-202ENSMUST00000109432 2273 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Clns1aQ61189 Ddc-210ENSMUST00000178704 2018 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Clns1aQ61189 Fbxo41-203ENSMUST00000161546 6357 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Clns1aQ61189 Mcidas-201ENSMUST00000092089 2377 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Clns1aQ61189 Slc25a41-202ENSMUST00000169012 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Clns1aQ61189 Aspm-205ENSMUST00000200083 6072 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Clns1aQ61189 Pdlim7-206ENSMUST00000131306 1915 ntTSL 2 BASIC13.3□□□□□ -0.28
Clns1aQ61189 Lsr-202ENSMUST00000098553 1930 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Clns1aQ61189 Gm26892-201ENSMUST00000181695 1636 ntTSL 5 BASIC13.3□□□□□ -0.28
Clns1aQ61189 Gm37728-201ENSMUST00000195025 2292 ntBASIC13.3□□□□□ -0.28
Clns1aQ61189 Rbmxl1-202ENSMUST00000211719 1622 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Clns1aQ61189 Ubp1-206ENSMUST00000216558 1623 ntAPPRIS P4 TSL 1 (best) BASIC13.3□□□□□ -0.28
Clns1aQ61189 Ddx20-201ENSMUST00000090680 2905 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Clns1aQ61189 Gnat1-201ENSMUST00000010205 2328 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Clns1aQ61189 Rcor1-202ENSMUST00000116388 2720 ntAPPRIS P2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Clns1aQ61189 Klhl26-202ENSMUST00000166976 2734 ntTSL 2 BASIC13.3□□□□□ -0.28
Clns1aQ61189 Kcnf1-201ENSMUST00000170580 4789 ntAPPRIS P1 BASIC13.3□□□□□ -0.28
Clns1aQ61189 Bpifb3-202ENSMUST00000109760 1741 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
Clns1aQ61189 Spdef-202ENSMUST00000114870 2070 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
Clns1aQ61189 Fgfr1op2-203ENSMUST00000067404 2766 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Clns1aQ61189 Coil-202ENSMUST00000107898 3120 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
Clns1aQ61189 Bbx-204ENSMUST00000114477 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Clns1aQ61189 Stard5-201ENSMUST00000075418 2483 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Clns1aQ61189 Agbl4-205ENSMUST00000106591 1406 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Clns1aQ61189 Agfg1-201ENSMUST00000063380 2896 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Clns1aQ61189 Tbx3-201ENSMUST00000018748 4856 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Clns1aQ61189 Krt2-201ENSMUST00000023712 2613 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Clns1aQ61189 Lmbr1-204ENSMUST00000198105 2274 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Clns1aQ61189 Tmem176a-201ENSMUST00000101426 1540 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Clns1aQ61189 Trim24-203ENSMUST00000120428 3940 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Clns1aQ61189 Prlhr-201ENSMUST00000051277 1572 ntAPPRIS P1 BASIC13.29□□□□□ -0.28
Clns1aQ61189 Tor1aip1-201ENSMUST00000027738 1952 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
Clns1aQ61189 Sra1-205ENSMUST00000173875 2360 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Clns1aQ61189 Zbtb20-202ENSMUST00000114690 2759 ntAPPRIS ALT1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Clns1aQ61189 Ccny-201ENSMUST00000053917 4017 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Clns1aQ61189 Acss1-201ENSMUST00000028944 3618 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Clns1aQ61189 Klhl12-202ENSMUST00000112232 3220 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Clns1aQ61189 Zfp36-202ENSMUST00000209061 2465 ntAPPRIS ALT2 BASIC13.29□□□□□ -0.28
Clns1aQ61189 9230020A06Rik-203ENSMUST00000214621 1682 ntTSL 5 BASIC13.29□□□□□ -0.28
Clns1aQ61189 Sarnp-201ENSMUST00000105230 918 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Clns1aQ61189 Zfp467-208ENSMUST00000114564 626 ntTSL 2 BASIC13.29□□□□□ -0.28
Clns1aQ61189 Mir1199-201ENSMUST00000117015 119 ntBASIC13.29□□□□□ -0.28
Clns1aQ61189 Gm11336-201ENSMUST00000118168 334 ntBASIC13.29□□□□□ -0.28
Clns1aQ61189 Ptf1aos-201ENSMUST00000122978 916 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Clns1aQ61189 Gm14114-201ENSMUST00000139345 287 ntTSL 3 BASIC13.29□□□□□ -0.28
Clns1aQ61189 Acaa1a-203ENSMUST00000175743 1219 ntTSL 5 BASIC13.29□□□□□ -0.28
Clns1aQ61189 Acaa1a-207ENSMUST00000176397 996 ntTSL 5 BASIC13.29□□□□□ -0.28
Clns1aQ61189 Park7-201ENSMUST00000030805 908 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Clns1aQ61189 Hpn-201ENSMUST00000039435 1743 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Clns1aQ61189 Ski-202ENSMUST00000084103 5309 ntTSL 5 BASIC13.29□□□□□ -0.28
Clns1aQ61189 Rbm26-201ENSMUST00000022715 3633 ntTSL 5 BASIC13.29□□□□□ -0.28
Clns1aQ61189 Metrn-202ENSMUST00000165838 1363 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Clns1aQ61189 Gm7008-201ENSMUST00000038121 1366 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Clns1aQ61189 Efcab14-204ENSMUST00000106525 2792 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Clns1aQ61189 Spock1-203ENSMUST00000185905 2794 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Clns1aQ61189 Nsd3-204ENSMUST00000139966 5261 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
Clns1aQ61189 Gm26627-201ENSMUST00000181540 1487 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Clns1aQ61189 Col1a1-201ENSMUST00000001547 5930 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Clns1aQ61189 Eif2b1-201ENSMUST00000031334 2013 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 28.6 ms