Protein–RNA interactions for Protein: Q60641

Nr1h4, Bile acid receptor, mousemouse

Predictions only

Length 488 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nr1h4Q60641 Pxk-205ENSMUST00000225653 2765 ntAPPRIS P2 BASIC14.81□□□□□ -0.04
Nr1h4Q60641 Ube2d1-201ENSMUST00000020085 1431 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Nr1h4Q60641 BC037039-201ENSMUST00000192003 2205 ntBASIC14.81□□□□□ -0.04
Nr1h4Q60641 Rgs6-208ENSMUST00000186458 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Nr1h4Q60641 Atp11b-201ENSMUST00000029257 4868 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Nr1h4Q60641 Fam178b-201ENSMUST00000114981 1659 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
Nr1h4Q60641 Gm45277-201ENSMUST00000210549 1695 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Nr1h4Q60641 Mycbp-201ENSMUST00000030400 1685 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Nr1h4Q60641 Fyn-202ENSMUST00000099967 3528 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Nr1h4Q60641 Adamts7-201ENSMUST00000113059 5379 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
Nr1h4Q60641 Apol8-201ENSMUST00000070911 1838 ntAPPRIS P2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Nr1h4Q60641 Eif4g1-204ENSMUST00000115460 5638 ntAPPRIS P3 TSL 5 BASIC14.8□□□□□ -0.04
Nr1h4Q60641 Hnrnpul1-205ENSMUST00000206832 3784 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Nr1h4Q60641 Gm128-201ENSMUST00000090815 1959 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Nr1h4Q60641 Rbfox3-205ENSMUST00000117731 3084 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Nr1h4Q60641 Arhgef40-220ENSMUST00000182909 5108 ntAPPRIS P4 TSL 5 BASIC14.8□□□□□ -0.04
Nr1h4Q60641 Rps5-202ENSMUST00000108539 794 ntAPPRIS P1 TSL 2 BASIC14.8□□□□□ -0.04
Nr1h4Q60641 Gm1673-203ENSMUST00000114383 511 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Nr1h4Q60641 Rab3d-202ENSMUST00000119055 694 ntTSL 3 BASIC14.8□□□□□ -0.04
Nr1h4Q60641 Gm18101-201ENSMUST00000215769 548 ntBASIC14.8□□□□□ -0.04
Nr1h4Q60641 Prm2-201ENSMUST00000037996 621 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Nr1h4Q60641 Mfap2-201ENSMUST00000071977 1073 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Nr1h4Q60641 Olfr601-201ENSMUST00000080474 990 ntAPPRIS P1 BASIC14.8□□□□□ -0.04
Nr1h4Q60641 Mrpl43-201ENSMUST00000097715 1213 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Nr1h4Q60641 Dse-201ENSMUST00000048010 4389 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Nr1h4Q60641 Rtn4-201ENSMUST00000060992 1773 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Nr1h4Q60641 Rmi2-201ENSMUST00000037913 3742 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Nr1h4Q60641 Col1a1-201ENSMUST00000001547 5930 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Nr1h4Q60641 Nacad-201ENSMUST00000045713 4892 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Nr1h4Q60641 Fam169b-201ENSMUST00000098378 2776 ntTSL 5 BASIC14.79□□□□□ -0.04
Nr1h4Q60641 Thop1-201ENSMUST00000005057 2832 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Nr1h4Q60641 Rabggta-205ENSMUST00000227061 2882 ntAPPRIS P1 BASIC14.79□□□□□ -0.04
Nr1h4Q60641 Raf1-201ENSMUST00000000451 3070 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Nr1h4Q60641 Clec16a-211ENSMUST00000155633 6213 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Nr1h4Q60641 Atf4-201ENSMUST00000109605 1724 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Nr1h4Q60641 Selenok-201ENSMUST00000112268 1678 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Nr1h4Q60641 Cnbp-203ENSMUST00000113619 1661 ntAPPRIS P2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Nr1h4Q60641 Gm12979-201ENSMUST00000145488 405 ntTSL 2 BASIC14.79□□□□□ -0.04
Nr1h4Q60641 Ubl7-201ENSMUST00000163329 1364 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
Nr1h4Q60641 Gm22697-201ENSMUST00000175194 63 ntBASIC14.79□□□□□ -0.04
Nr1h4Q60641 Has3-202ENSMUST00000175987 1154 ntTSL 5 BASIC14.79□□□□□ -0.04
Nr1h4Q60641 Gm10814-201ENSMUST00000180505 1933 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Nr1h4Q60641 Fuz-209ENSMUST00000208179 1164 ntTSL 5 BASIC14.79□□□□□ -0.04
Nr1h4Q60641 A330040F15Rik-202ENSMUST00000224046 1918 ntBASIC14.79□□□□□ -0.04
Nr1h4Q60641 Lmnb1-201ENSMUST00000025486 2843 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Nr1h4Q60641 Eif2b1-201ENSMUST00000031334 2013 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Nr1h4Q60641 Nudt1-201ENSMUST00000050205 954 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Nr1h4Q60641 Lce1h-201ENSMUST00000051521 706 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Nr1h4Q60641 Nudt1-202ENSMUST00000071881 952 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Nr1h4Q60641 D430041D05Rik-201ENSMUST00000089726 10124 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
Nr1h4Q60641 Sox13-205ENSMUST00000153799 3693 ntAPPRIS P2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Nr1h4Q60641 Rrp8-201ENSMUST00000033179 3053 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
Nr1h4Q60641 Zfp553-201ENSMUST00000056232 3043 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Nr1h4Q60641 Slc5a5-201ENSMUST00000000809 2928 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Nr1h4Q60641 Etv6-202ENSMUST00000111963 5707 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Nr1h4Q60641 Hhat-201ENSMUST00000044190 2839 ntAPPRIS P2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Nr1h4Q60641 Anks1b-202ENSMUST00000099366 2549 ntTSL 5 BASIC14.79□□□□□ -0.04
Nr1h4Q60641 Fbxw7-204ENSMUST00000107679 4473 ntAPPRIS ALT1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Nr1h4Q60641 Hps5-201ENSMUST00000014562 4953 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
Nr1h4Q60641 Cd151-201ENSMUST00000058746 1619 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Nr1h4Q60641 Rgs3-201ENSMUST00000065870 4698 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Nr1h4Q60641 Stard7-201ENSMUST00000110374 1530 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Nr1h4Q60641 Rab34-201ENSMUST00000002128 1368 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Nr1h4Q60641 Gm1673-202ENSMUST00000114382 451 ntAPPRIS ALT2 TSL 2 BASIC14.78□□□□□ -0.04
Nr1h4Q60641 Rbmx-206ENSMUST00000143310 1296 ntTSL 5 BASIC14.78□□□□□ -0.04
Nr1h4Q60641 E2f7-205ENSMUST00000173634 827 ntTSL 2 BASIC14.78□□□□□ -0.04
Nr1h4Q60641 Ascl5-201ENSMUST00000180436 567 ntAPPRIS P1 BASIC14.78□□□□□ -0.04
Nr1h4Q60641 Gm43799-201ENSMUST00000201845 579 ntBASIC14.78□□□□□ -0.04
Nr1h4Q60641 Chmp2a-203ENSMUST00000210587 930 ntAPPRIS P1 TSL 3 BASIC14.78□□□□□ -0.04
Nr1h4Q60641 Efcab11-207ENSMUST00000223114 1122 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
Nr1h4Q60641 Rtl8a-201ENSMUST00000088779 1195 ntAPPRIS P1 BASIC14.78□□□□□ -0.04
Nr1h4Q60641 Gadd45gip1-201ENSMUST00000036734 2494 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Nr1h4Q60641 Sik2-201ENSMUST00000041375 3552 ntAPPRIS P2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Nr1h4Q60641 Fam69c-201ENSMUST00000052501 2153 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Nr1h4Q60641 Cacna1g-203ENSMUST00000103166 8104 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
Nr1h4Q60641 Des-201ENSMUST00000027409 3028 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Nr1h4Q60641 Phc2-201ENSMUST00000030588 3949 ntAPPRIS P3 TSL 5 BASIC14.78□□□□□ -0.04
Nr1h4Q60641 Pla2g16-203ENSMUST00000136756 1901 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Nr1h4Q60641 Nrip2-201ENSMUST00000001561 1893 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Nr1h4Q60641 Apaf1-201ENSMUST00000020157 6577 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.04
Nr1h4Q60641 Zkscan4-202ENSMUST00000225845 1506 ntBASIC14.77□□□□□ -0.04
Nr1h4Q60641 Acbd5-203ENSMUST00000114526 3725 ntAPPRIS P4 TSL 1 (best) BASIC14.77□□□□□ -0.04
Nr1h4Q60641 Zfp36l1-201ENSMUST00000021552 2990 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Nr1h4Q60641 Dagla-201ENSMUST00000039327 5634 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.04
Nr1h4Q60641 Spns1-203ENSMUST00000119846 2017 ntTSL 5 BASIC14.77□□□□□ -0.04
Nr1h4Q60641 Mrap2-203ENSMUST00000179313 2039 ntAPPRIS P1 TSL 2 BASIC14.77□□□□□ -0.04
Nr1h4Q60641 Ttc14-202ENSMUST00000108210 2684 ntAPPRIS ALT2 TSL 5 BASIC14.77□□□□□ -0.04
Nr1h4Q60641 Gm11860-201ENSMUST00000122346 1010 ntBASIC14.77□□□□□ -0.05
Nr1h4Q60641 Arl5b-206ENSMUST00000193836 481 ntTSL 2 BASIC14.77□□□□□ -0.05
Nr1h4Q60641 Gm35240-201ENSMUST00000218335 661 ntTSL 2 BASIC14.77□□□□□ -0.05
Nr1h4Q60641 Krtap1-5-201ENSMUST00000054532 1041 ntAPPRIS P1 BASIC14.77□□□□□ -0.05
Nr1h4Q60641 Tmem128-201ENSMUST00000087511 1291 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Nr1h4Q60641 Ppp3cb-201ENSMUST00000022355 3074 ntAPPRIS ALT1 TSL 5 BASIC14.77□□□□□ -0.05
Nr1h4Q60641 Smox-204ENSMUST00000110181 2299 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
Nr1h4Q60641 Gmppa-202ENSMUST00000113584 1692 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.05
Nr1h4Q60641 Tpm2-201ENSMUST00000030184 2175 ntTSL 5 BASIC14.77□□□□□ -0.05
Nr1h4Q60641 4833422C13Rik-201ENSMUST00000099331 2083 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
Nr1h4Q60641 St6galnac2-201ENSMUST00000079545 3643 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Nr1h4Q60641 Bclaf3-201ENSMUST00000057180 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Nr1h4Q60641 BC037032-201ENSMUST00000140003 3974 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Retrieved 100 of 76,532 protein–RNA pairs in 29.7 ms