Protein–RNA interactions for Protein: Q5U4C3

Scaf1, Splicing factor, arginine/serine-rich 19, mousemouse

Known RBP Predictions only

Length 1,256 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scaf1Q5U4C3 Mprip-201ENSMUST00000066330 7765 ntAPPRIS ALT2 TSL 5 BASIC20.17■□□□□ 0.82
Scaf1Q5U4C3 Hist1h3e-201ENSMUST00000105107 836 ntAPPRIS P1 BASIC20.17■□□□□ 0.82
Scaf1Q5U4C3 Tspan5-203ENSMUST00000121826 1114 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Scaf1Q5U4C3 1700021F05Rik-202ENSMUST00000147196 860 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Scaf1Q5U4C3 Gm25948-201ENSMUST00000175334 112 ntBASIC20.17■□□□□ 0.82
Scaf1Q5U4C3 H2-Bl-209ENSMUST00000194244 862 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Scaf1Q5U4C3 Gm8239-201ENSMUST00000204094 444 ntTSL 2 BASIC20.17■□□□□ 0.82
Scaf1Q5U4C3 Rgs10-201ENSMUST00000033133 880 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Scaf1Q5U4C3 Slc15a3-201ENSMUST00000025646 2345 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Scaf1Q5U4C3 Tex13a-201ENSMUST00000096314 1317 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Scaf1Q5U4C3 Sept11-205ENSMUST00000201700 3478 ntAPPRIS ALT1 TSL 2 BASIC20.17■□□□□ 0.82
Scaf1Q5U4C3 Gm16976-201ENSMUST00000099718 1894 ntTSL 5 BASIC20.17■□□□□ 0.82
Scaf1Q5U4C3 Gm34419-201ENSMUST00000211383 1387 ntTSL 5 BASIC20.17■□□□□ 0.82
Scaf1Q5U4C3 Gstm7-201ENSMUST00000004137 1377 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Scaf1Q5U4C3 Slc22a1-201ENSMUST00000024596 1994 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Scaf1Q5U4C3 Golga7b-201ENSMUST00000087123 2823 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Scaf1Q5U4C3 Ddx39-202ENSMUST00000109810 1794 ntAPPRIS P1 TSL 5 BASIC20.16■□□□□ 0.82
Scaf1Q5U4C3 Chuk-202ENSMUST00000119591 3481 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Scaf1Q5U4C3 Washc1-202ENSMUST00000116556 2887 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Scaf1Q5U4C3 Phf7-201ENSMUST00000022459 2084 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Scaf1Q5U4C3 Gm14057-201ENSMUST00000120631 482 ntBASIC20.16■□□□□ 0.82
Scaf1Q5U4C3 Rps10-ps2-201ENSMUST00000127484 496 ntBASIC20.16■□□□□ 0.82
Scaf1Q5U4C3 Ucn-202ENSMUST00000201184 499 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Scaf1Q5U4C3 Tmem38a-203ENSMUST00000212763 882 ntTSL 3 BASIC20.16■□□□□ 0.82
Scaf1Q5U4C3 Amfr-201ENSMUST00000053766 3880 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Scaf1Q5U4C3 2810408A11Rik-202ENSMUST00000100969 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
Scaf1Q5U4C3 Hspa8-201ENSMUST00000015800 2394 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Scaf1Q5U4C3 Mcl1-201ENSMUST00000037947 3418 ntAPPRIS P2 TSL 1 (best) BASIC20.16■□□□□ 0.82
Scaf1Q5U4C3 Stap2-201ENSMUST00000043785 1491 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Scaf1Q5U4C3 Ifnar1-202ENSMUST00000117748 2771 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Scaf1Q5U4C3 Dusp13-201ENSMUST00000075040 1745 ntAPPRIS P2 TSL 1 (best) BASIC20.16■□□□□ 0.82
Scaf1Q5U4C3 Spcs2-201ENSMUST00000036274 2909 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Scaf1Q5U4C3 Pde1c-203ENSMUST00000164037 3068 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Scaf1Q5U4C3 Smad1-202ENSMUST00000066091 3099 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Scaf1Q5U4C3 A530084C06Rik-201ENSMUST00000170573 3200 ntAPPRIS P1 BASIC20.15■□□□□ 0.82
Scaf1Q5U4C3 Hap1-201ENSMUST00000103124 2120 ntAPPRIS P3 TSL 1 (best) BASIC20.15■□□□□ 0.82
Scaf1Q5U4C3 Zfp786-201ENSMUST00000058844 3191 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Scaf1Q5U4C3 Tex22-202ENSMUST00000109729 735 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Scaf1Q5U4C3 E130218I03Rik-203ENSMUST00000125921 666 ntAPPRIS P1 TSL 2 BASIC20.15■□□□□ 0.82
Scaf1Q5U4C3 E130218I03Rik-206ENSMUST00000135228 544 ntAPPRIS P1 TSL 3 BASIC20.15■□□□□ 0.82
Scaf1Q5U4C3 Hpca-207ENSMUST00000139450 812 ntAPPRIS P1 TSL 3 BASIC20.15■□□□□ 0.82
Scaf1Q5U4C3 Gm16191-201ENSMUST00000141445 520 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Scaf1Q5U4C3 E130218I03Rik-207ENSMUST00000143448 591 ntAPPRIS P1 TSL 3 BASIC20.15■□□□□ 0.82
Scaf1Q5U4C3 Tgfb1i1-203ENSMUST00000163609 1053 ntTSL 5 BASIC20.15■□□□□ 0.82
Scaf1Q5U4C3 1700017L05Rik-201ENSMUST00000201654 558 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Scaf1Q5U4C3 Mrpl4-201ENSMUST00000003386 1288 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Scaf1Q5U4C3 Gm42934-201ENSMUST00000196920 1345 ntBASIC20.15■□□□□ 0.82
Scaf1Q5U4C3 Rab3a-202ENSMUST00000110090 1375 ntAPPRIS P1 TSL 3 BASIC20.15■□□□□ 0.82
Scaf1Q5U4C3 Akirin2-201ENSMUST00000084299 1397 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Scaf1Q5U4C3 Gpc5-202ENSMUST00000175665 2187 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Scaf1Q5U4C3 Abi1-215ENSMUST00000178908 2239 ntAPPRIS ALT1 TSL 5 BASIC20.15■□□□□ 0.82
Scaf1Q5U4C3 Tmem50b-201ENSMUST00000023686 2347 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Scaf1Q5U4C3 Pola2-202ENSMUST00000165143 2397 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Scaf1Q5U4C3 Sox4-201ENSMUST00000067230 4795 ntAPPRIS P1 BASIC20.14■□□□□ 0.82
Scaf1Q5U4C3 Jakmip1-202ENSMUST00000121010 2496 ntTSL 5 BASIC20.14■□□□□ 0.82
Scaf1Q5U4C3 Agpat1-202ENSMUST00000114140 1941 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Scaf1Q5U4C3 Agpat1-208ENSMUST00000174595 1911 ntAPPRIS P1 TSL 5 BASIC20.14■□□□□ 0.81
Scaf1Q5U4C3 Gm42918-201ENSMUST00000199249 1580 ntBASIC20.14■□□□□ 0.81
Scaf1Q5U4C3 Dcaf13-201ENSMUST00000022909 1551 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Scaf1Q5U4C3 Dlk2-203ENSMUST00000166617 1528 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Scaf1Q5U4C3 Arfgap1-214ENSMUST00000185115 1393 ntAPPRIS ALT2 TSL 5 BASIC20.14■□□□□ 0.81
Scaf1Q5U4C3 Gm15593-201ENSMUST00000122085 1008 ntBASIC20.14■□□□□ 0.81
Scaf1Q5U4C3 Arhgap27os1-201ENSMUST00000130556 923 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
Scaf1Q5U4C3 Gm22175-201ENSMUST00000175007 78 ntBASIC20.14■□□□□ 0.81
Scaf1Q5U4C3 Panct2-202ENSMUST00000188631 625 ntTSL 3 BASIC20.14■□□□□ 0.81
Scaf1Q5U4C3 Cyb561d2-205ENSMUST00000195235 1162 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Scaf1Q5U4C3 Itsn2-201ENSMUST00000062580 5987 ntAPPRIS P2 TSL 5 BASIC20.14■□□□□ 0.81
Scaf1Q5U4C3 Scrib-201ENSMUST00000002603 5599 ntAPPRIS P3 TSL 1 (best) BASIC20.14■□□□□ 0.81
Scaf1Q5U4C3 Ankrd63-201ENSMUST00000104937 4861 ntAPPRIS P1 BASIC20.14■□□□□ 0.81
Scaf1Q5U4C3 Anks6-202ENSMUST00000107747 3980 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
Scaf1Q5U4C3 Slc39a10-201ENSMUST00000027131 5498 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Scaf1Q5U4C3 Pqlc1-203ENSMUST00000123750 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.81
Scaf1Q5U4C3 Wfikkn1-201ENSMUST00000095487 1981 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Scaf1Q5U4C3 Rnf170-209ENSMUST00000209300 1881 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Scaf1Q5U4C3 Bcs1l-201ENSMUST00000027358 1890 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Scaf1Q5U4C3 Sema6d-203ENSMUST00000077847 6444 ntTSL 5 BASIC20.13■□□□□ 0.81
Scaf1Q5U4C3 Oser1-202ENSMUST00000104954 1702 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Scaf1Q5U4C3 Wnk2-201ENSMUST00000035538 6630 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
Scaf1Q5U4C3 Ccnb2-201ENSMUST00000034742 1531 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Scaf1Q5U4C3 Myog-201ENSMUST00000027730 1495 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Scaf1Q5U4C3 Fmnl2-202ENSMUST00000050719 3380 ntTSL 5 BASIC20.13■□□□□ 0.81
Scaf1Q5U4C3 Gm42473-201ENSMUST00000201056 2291 ntBASIC20.13■□□□□ 0.81
Scaf1Q5U4C3 Foxp4-203ENSMUST00000113263 3156 ntAPPRIS ALT2 TSL 5 BASIC20.13■□□□□ 0.81
Scaf1Q5U4C3 Gm6018-201ENSMUST00000216090 1306 ntBASIC20.13■□□□□ 0.81
Scaf1Q5U4C3 Sh3bgr-201ENSMUST00000048770 1321 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Scaf1Q5U4C3 Tpm3-203ENSMUST00000119158 1090 ntTSL 3 BASIC20.13■□□□□ 0.81
Scaf1Q5U4C3 Gpx4-207ENSMUST00000183037 735 ntTSL 2 BASIC20.13■□□□□ 0.81
Scaf1Q5U4C3 Gm7774-201ENSMUST00000200064 533 ntBASIC20.13■□□□□ 0.81
Scaf1Q5U4C3 Cd3g-201ENSMUST00000002101 1023 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Scaf1Q5U4C3 AC166341.4-201ENSMUST00000220625 123 ntBASIC20.13■□□□□ 0.81
Scaf1Q5U4C3 Lce1g-201ENSMUST00000029527 925 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Scaf1Q5U4C3 Matr3-214ENSMUST00000190029 2845 ntAPPRIS P1 TSL 5 BASIC20.13■□□□□ 0.81
Scaf1Q5U4C3 Xylt1-201ENSMUST00000032892 9020 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Scaf1Q5U4C3 Hhatl-201ENSMUST00000035110 1870 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Scaf1Q5U4C3 Fbxo8-202ENSMUST00000110322 1709 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Scaf1Q5U4C3 Rev1-201ENSMUST00000027251 4262 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Scaf1Q5U4C3 Vopp1-201ENSMUST00000114297 2919 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Scaf1Q5U4C3 Prpf40b-212ENSMUST00000145482 3308 ntAPPRIS P2 TSL 1 (best) BASIC20.12■□□□□ 0.81
Scaf1Q5U4C3 Poli-203ENSMUST00000159389 2662 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Scaf1Q5U4C3 Camta1-204ENSMUST00000105670 4961 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Retrieved 100 of 76,532 protein–RNA pairs in 41.7 ms