Protein–RNA interactions for Protein: Q5R1I3

Trav7-2, T cell receptor alpha variable 7-2 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav7-2Q5R1I3 Unc5d-203ENSMUST00000210298 3060 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Trav7-2Q5R1I3 Unc5d-205ENSMUST00000211448 3087 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Trav7-2Q5R1I3 Gm6277-201ENSMUST00000180860 1839 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Trav7-2Q5R1I3 Repin1-207ENSMUST00000163452 2959 ntAPPRIS P3 TSL 1 (best) BASIC11.6□□□□□ -0.55
Trav7-2Q5R1I3 Bud23-202ENSMUST00000085984 1516 ntAPPRIS P2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Trav7-2Q5R1I3 H2-DMb1-201ENSMUST00000114232 1404 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Trav7-2Q5R1I3 Snrpd2-201ENSMUST00000049294 1420 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Trav7-2Q5R1I3 Vmn1r17-204ENSMUST00000228294 2084 ntAPPRIS ALT2 BASIC11.59□□□□□ -0.55
Trav7-2Q5R1I3 Miga1-205ENSMUST00000199397 2842 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Trav7-2Q5R1I3 Ccdc154-202ENSMUST00000182292 1989 ntAPPRIS ALT2 TSL 5 BASIC11.59□□□□□ -0.55
Trav7-2Q5R1I3 Akp-ps1-202ENSMUST00000212812 1959 ntTSL 5 BASIC11.59□□□□□ -0.55
Trav7-2Q5R1I3 Naprt-201ENSMUST00000023237 1890 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Trav7-2Q5R1I3 Ccdc174-201ENSMUST00000037783 1752 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Trav7-2Q5R1I3 Cd82-205ENSMUST00000116457 1683 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Trav7-2Q5R1I3 Slc4a5-203ENSMUST00000113900 3630 ntAPPRIS ALT2 TSL 5 BASIC11.59□□□□□ -0.55
Trav7-2Q5R1I3 Skor1-203ENSMUST00000119146 3610 ntAPPRIS ALT2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Trav7-2Q5R1I3 Rnd1-201ENSMUST00000003451 2203 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Trav7-2Q5R1I3 Shroom1-204ENSMUST00000109013 3312 ntAPPRIS P3 TSL 1 (best) BASIC11.59□□□□□ -0.55
Trav7-2Q5R1I3 Gpr155-202ENSMUST00000076463 5061 ntAPPRIS P3 TSL 1 (best) BASIC11.59□□□□□ -0.55
Trav7-2Q5R1I3 Ubtf-205ENSMUST00000107119 3013 ntAPPRIS ALT2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Trav7-2Q5R1I3 Atg9a-208ENSMUST00000189702 4110 ntAPPRIS P1 TSL 5 BASIC11.59□□□□□ -0.55
Trav7-2Q5R1I3 Casp8-204ENSMUST00000191201 1849 ntAPPRIS ALT2 TSL 5 BASIC11.59□□□□□ -0.55
Trav7-2Q5R1I3 Lcn12-202ENSMUST00000114245 619 ntAPPRIS ALT2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Trav7-2Q5R1I3 Gm15545-202ENSMUST00000141011 899 ntTSL 3 BASIC11.59□□□□□ -0.55
Trav7-2Q5R1I3 Tppp3-201ENSMUST00000014990 1127 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Trav7-2Q5R1I3 Snhg4-201ENSMUST00000181664 1190 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Trav7-2Q5R1I3 AC114585.2-202ENSMUST00000228094 426 ntBASIC11.59□□□□□ -0.55
Trav7-2Q5R1I3 Npcd-201ENSMUST00000023060 1162 ntAPPRIS ALT2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Trav7-2Q5R1I3 Ppp1r27-201ENSMUST00000026121 771 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Trav7-2Q5R1I3 Atp5l-201ENSMUST00000043675 544 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Trav7-2Q5R1I3 Hist1h2ab-201ENSMUST00000078369 473 ntAPPRIS P1 BASIC11.59□□□□□ -0.55
Trav7-2Q5R1I3 Rplp2-201ENSMUST00000084434 964 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Trav7-2Q5R1I3 Pde4dip-202ENSMUST00000090750 8376 ntAPPRIS ALT2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Trav7-2Q5R1I3 Tmpo-202ENSMUST00000072239 3533 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Trav7-2Q5R1I3 Synrg-201ENSMUST00000049714 3995 ntAPPRIS ALT2 TSL 5 BASIC11.59□□□□□ -0.55
Trav7-2Q5R1I3 Rasgef1b-206ENSMUST00000161516 2523 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Trav7-2Q5R1I3 Raxos1-201ENSMUST00000181100 2547 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Trav7-2Q5R1I3 Bmper-201ENSMUST00000071982 3791 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Trav7-2Q5R1I3 Gm40773-201ENSMUST00000218113 1502 ntTSL 5 BASIC11.59□□□□□ -0.55
Trav7-2Q5R1I3 Zkscan4-202ENSMUST00000225845 1506 ntBASIC11.59□□□□□ -0.55
Trav7-2Q5R1I3 Adam10-201ENSMUST00000067880 4593 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Trav7-2Q5R1I3 Rnf170-209ENSMUST00000209300 1881 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Trav7-2Q5R1I3 Rarb-201ENSMUST00000063750 3108 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Trav7-2Q5R1I3 Tm6sf2-202ENSMUST00000110160 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Trav7-2Q5R1I3 Mvd-201ENSMUST00000006692 1756 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Trav7-2Q5R1I3 Txnrd3-202ENSMUST00000101171 2494 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Trav7-2Q5R1I3 Itga8-201ENSMUST00000028106 5812 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Trav7-2Q5R1I3 Vwa8-202ENSMUST00000227255 3406 ntAPPRIS ALT2 BASIC11.58□□□□□ -0.55
Trav7-2Q5R1I3 9130017K11Rik-202ENSMUST00000135670 3338 ntTSL 1 (best) BASIC11.58□□□□□ -0.55
Trav7-2Q5R1I3 Rassf7-208ENSMUST00000209500 1560 ntAPPRIS ALT2 TSL 5 BASIC11.58□□□□□ -0.55
Trav7-2Q5R1I3 Eml3-202ENSMUST00000224272 2978 ntAPPRIS ALT2 BASIC11.58□□□□□ -0.55
Trav7-2Q5R1I3 Chaf1b-201ENSMUST00000023666 1922 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.55
Trav7-2Q5R1I3 Papd4-201ENSMUST00000048702 2990 ntAPPRIS P2 TSL 1 (best) BASIC11.58□□□□□ -0.55
Trav7-2Q5R1I3 Pitpnm1-202ENSMUST00000100022 4512 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Trav7-2Q5R1I3 Ankrd33b-204ENSMUST00000123325 7466 ntAPPRIS ALT2 TSL 1 (best) BASIC11.58□□□□□ -0.56
Trav7-2Q5R1I3 Sctr-202ENSMUST00000189037 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC11.58□□□□□ -0.56
Trav7-2Q5R1I3 Rbm26-201ENSMUST00000022715 3633 ntTSL 5 BASIC11.58□□□□□ -0.56
Trav7-2Q5R1I3 Smarca5-201ENSMUST00000043359 6113 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Trav7-2Q5R1I3 Gm13111-201ENSMUST00000136217 3542 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Trav7-2Q5R1I3 Pgc-201ENSMUST00000024782 1388 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Trav7-2Q5R1I3 Csnk2a2-201ENSMUST00000056919 3773 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Trav7-2Q5R1I3 Enah-204ENSMUST00000111030 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC11.58□□□□□ -0.56
Trav7-2Q5R1I3 Tmem185b-202ENSMUST00000183952 2824 ntAPPRIS P1 BASIC11.58□□□□□ -0.56
Trav7-2Q5R1I3 Tbc1d4-210ENSMUST00000162617 4762 ntAPPRIS ALT2 TSL 5 BASIC11.58□□□□□ -0.56
Trav7-2Q5R1I3 Hotairm1-202ENSMUST00000132559 713 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Trav7-2Q5R1I3 Gm15234-201ENSMUST00000141485 1058 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Trav7-2Q5R1I3 Tppp3-202ENSMUST00000176419 719 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Trav7-2Q5R1I3 AC130711.1-201ENSMUST00000224277 906 ntAPPRIS P1 BASIC11.58□□□□□ -0.56
Trav7-2Q5R1I3 AC130713.1-201ENSMUST00000228853 1096 ntBASIC11.58□□□□□ -0.56
Trav7-2Q5R1I3 Il17a-201ENSMUST00000027061 1171 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Trav7-2Q5R1I3 Tesc-201ENSMUST00000031304 1031 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Trav7-2Q5R1I3 Irf7-202ENSMUST00000097952 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC11.58□□□□□ -0.56
Trav7-2Q5R1I3 Cacnb1-201ENSMUST00000017552 3396 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Trav7-2Q5R1I3 Haghl-201ENSMUST00000077938 1405 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Trav7-2Q5R1I3 Ush1c-208ENSMUST00000177212 1696 ntAPPRIS ALT2 TSL 5 BASIC11.58□□□□□ -0.56
Trav7-2Q5R1I3 Tyk2-205ENSMUST00000214864 1662 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Trav7-2Q5R1I3 Pard3b-202ENSMUST00000075374 8392 ntAPPRIS P2 TSL 5 BASIC11.58□□□□□ -0.56
Trav7-2Q5R1I3 Phax-201ENSMUST00000008445 1942 ntAPPRIS P3 TSL 1 (best) BASIC11.58□□□□□ -0.56
Trav7-2Q5R1I3 Plod2-203ENSMUST00000160359 3663 ntAPPRIS ALT2 TSL 1 (best) BASIC11.58□□□□□ -0.56
Trav7-2Q5R1I3 Nfe2l1-201ENSMUST00000081775 4654 ntAPPRIS P3 TSL 1 (best) BASIC11.58□□□□□ -0.56
Trav7-2Q5R1I3 Fbxo28-201ENSMUST00000051431 4925 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Trav7-2Q5R1I3 Cdcp1-201ENSMUST00000039229 5310 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Trav7-2Q5R1I3 Rad23a-202ENSMUST00000109761 1842 ntAPPRIS ALT1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Trav7-2Q5R1I3 Phkg2-202ENSMUST00000121004 1840 ntAPPRIS P1 TSL 5 BASIC11.58□□□□□ -0.56
Trav7-2Q5R1I3 Tubb4b-201ENSMUST00000043584 1598 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Trav7-2Q5R1I3 Mief1-202ENSMUST00000166030 2712 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Trav7-2Q5R1I3 Gm26666-201ENSMUST00000180763 2461 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Trav7-2Q5R1I3 Smox-208ENSMUST00000110188 1991 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Trav7-2Q5R1I3 Gm13285-201ENSMUST00000179725 1462 ntAPPRIS P1 BASIC11.57□□□□□ -0.56
Trav7-2Q5R1I3 Mbp-206ENSMUST00000102812 2108 ntAPPRIS ALT2 TSL 2 BASIC11.57□□□□□ -0.56
Trav7-2Q5R1I3 Fdx1-202ENSMUST00000214013 2759 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Trav7-2Q5R1I3 Flt4-201ENSMUST00000020617 6255 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Trav7-2Q5R1I3 Gm42901-201ENSMUST00000197735 3171 ntBASIC11.57□□□□□ -0.56
Trav7-2Q5R1I3 Homer2-206ENSMUST00000207983 1634 ntAPPRIS P3 TSL 1 (best) BASIC11.57□□□□□ -0.56
Trav7-2Q5R1I3 Fbxo34-201ENSMUST00000043112 2937 ntAPPRIS P3 TSL 1 (best) BASIC11.57□□□□□ -0.56
Trav7-2Q5R1I3 Pcdhb22-201ENSMUST00000097609 2266 ntTSL 2 BASIC11.57□□□□□ -0.56
Trav7-2Q5R1I3 Pnkp-203ENSMUST00000107876 1770 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Trav7-2Q5R1I3 Arhgef5-201ENSMUST00000031750 5469 ntAPPRIS P1 TSL 5 BASIC11.57□□□□□ -0.56
Trav7-2Q5R1I3 Adora2a-201ENSMUST00000105420 2596 ntAPPRIS P1 TSL 3 BASIC11.57□□□□□ -0.56
Trav7-2Q5R1I3 Slc9a3r1-201ENSMUST00000021077 1925 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Retrieved 100 of 76,532 protein–RNA pairs in 28.2 ms