Protein–RNA interactions for Protein: Q5R1H8

Trav8d-1, T cell receptor alpha variable 8D-1 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav8d-1Q5R1H8 Ccdc137-201ENSMUST00000058370 2778 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Trav8d-1Q5R1H8 Nacc2-201ENSMUST00000028300 6378 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Trav8d-1Q5R1H8 Chst10-205ENSMUST00000193441 4999 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Trav8d-1Q5R1H8 Wnt5b-201ENSMUST00000117171 2174 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Trav8d-1Q5R1H8 Acvr1c-204ENSMUST00000112608 1497 ntAPPRIS ALT2 TSL 5 BASIC12.77□□□□□ -0.37
Trav8d-1Q5R1H8 Mis12-201ENSMUST00000048807 3003 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Trav8d-1Q5R1H8 Arhgef1-218ENSMUST00000206508 3195 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Trav8d-1Q5R1H8 Gm10710-201ENSMUST00000047876 3971 ntBASIC12.77□□□□□ -0.37
Trav8d-1Q5R1H8 Gm16861-201ENSMUST00000181498 1647 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Trav8d-1Q5R1H8 Josd1-201ENSMUST00000023061 3394 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Trav8d-1Q5R1H8 Syt6-201ENSMUST00000090697 4416 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
Trav8d-1Q5R1H8 Il7-203ENSMUST00000192202 2057 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Trav8d-1Q5R1H8 Syvn1-203ENSMUST00000134667 3159 ntAPPRIS P2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trav8d-1Q5R1H8 Csrnp1-203ENSMUST00000214058 2241 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trav8d-1Q5R1H8 Ppip5k2-201ENSMUST00000042509 5882 ntAPPRIS P2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trav8d-1Q5R1H8 Jakmip1-202ENSMUST00000121010 2496 ntTSL 5 BASIC12.76□□□□□ -0.37
Trav8d-1Q5R1H8 Smim1-205ENSMUST00000131325 842 ntTSL 5 BASIC12.76□□□□□ -0.37
Trav8d-1Q5R1H8 4930526A20Rik-201ENSMUST00000134228 941 ntBASIC12.76□□□□□ -0.37
Trav8d-1Q5R1H8 Pcyox1-206ENSMUST00000204116 546 ntTSL 5 BASIC12.76□□□□□ -0.37
Trav8d-1Q5R1H8 4732471J01Rik-202ENSMUST00000205787 991 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Trav8d-1Q5R1H8 Cenps-201ENSMUST00000030813 1110 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trav8d-1Q5R1H8 Gzme-201ENSMUST00000089549 916 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trav8d-1Q5R1H8 Lifr-201ENSMUST00000067190 4143 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trav8d-1Q5R1H8 Mtg2-202ENSMUST00000108901 1444 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
Trav8d-1Q5R1H8 Snapc3-201ENSMUST00000030206 1405 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trav8d-1Q5R1H8 Dnajc27-202ENSMUST00000049584 2934 ntAPPRIS P1 TSL 2 BASIC12.76□□□□□ -0.37
Trav8d-1Q5R1H8 Gm26781-201ENSMUST00000181385 1477 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Trav8d-1Q5R1H8 Mycbp-202ENSMUST00000106202 1536 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Trav8d-1Q5R1H8 Ndufv3-201ENSMUST00000046288 1537 ntAPPRIS P4 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trav8d-1Q5R1H8 Edem3-204ENSMUST00000191070 3127 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Trav8d-1Q5R1H8 Slc38a7-201ENSMUST00000040481 3333 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trav8d-1Q5R1H8 Dnaja1-210ENSMUST00000164233 5622 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
Trav8d-1Q5R1H8 Ap5m1-205ENSMUST00000227431 3757 ntBASIC12.76□□□□□ -0.37
Trav8d-1Q5R1H8 Vldlr-208ENSMUST00000172302 3855 ntAPPRIS ALT1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trav8d-1Q5R1H8 Irf3-201ENSMUST00000003284 2031 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trav8d-1Q5R1H8 Gopc-201ENSMUST00000020008 4216 ntAPPRIS P2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trav8d-1Q5R1H8 Ggn-205ENSMUST00000209019 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trav8d-1Q5R1H8 Fam149b-216ENSMUST00000225942 2151 ntAPPRIS ALT2 BASIC12.76□□□□□ -0.37
Trav8d-1Q5R1H8 Tom1l2-201ENSMUST00000064019 2151 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Trav8d-1Q5R1H8 Cdk2-201ENSMUST00000026415 2240 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trav8d-1Q5R1H8 Rhoj-202ENSMUST00000118602 2396 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Trav8d-1Q5R1H8 Ids-201ENSMUST00000101509 4972 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trav8d-1Q5R1H8 Agbl5-202ENSMUST00000114700 3296 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trav8d-1Q5R1H8 Ralgds-203ENSMUST00000113893 3683 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trav8d-1Q5R1H8 Myrf-201ENSMUST00000088013 5674 ntAPPRIS ALT2 TSL 5 BASIC12.75□□□□□ -0.37
Trav8d-1Q5R1H8 Adamts20-201ENSMUST00000035342 6027 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trav8d-1Q5R1H8 Kmt5c-202ENSMUST00000108582 2774 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trav8d-1Q5R1H8 Skp1a-203ENSMUST00000109072 1754 ntAPPRIS P1 TSL 5 BASIC12.75□□□□□ -0.37
Trav8d-1Q5R1H8 Gmcl1-202ENSMUST00000113679 960 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Trav8d-1Q5R1H8 Nagk-203ENSMUST00000113851 1323 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Trav8d-1Q5R1H8 Zbtb20-202ENSMUST00000114690 2759 ntAPPRIS ALT1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trav8d-1Q5R1H8 Fam178b-201ENSMUST00000114981 1659 ntAPPRIS P3 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trav8d-1Q5R1H8 Pptc7-202ENSMUST00000119015 2233 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trav8d-1Q5R1H8 Ccnj-202ENSMUST00000119316 3763 ntAPPRIS P1 TSL 5 BASIC12.75□□□□□ -0.37
Trav8d-1Q5R1H8 2610027K06Rik-203ENSMUST00000140673 2076 ntTSL 5 BASIC12.75□□□□□ -0.37
Trav8d-1Q5R1H8 Sema6b-202ENSMUST00000167545 3847 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trav8d-1Q5R1H8 B230217O12Rik-201ENSMUST00000181921 1642 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Trav8d-1Q5R1H8 Gm7854-202ENSMUST00000187409 1433 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Trav8d-1Q5R1H8 Gm43791-201ENSMUST00000202914 468 ntTSL 5 BASIC12.75□□□□□ -0.37
Trav8d-1Q5R1H8 Gm18032-201ENSMUST00000222541 538 ntBASIC12.75□□□□□ -0.37
Trav8d-1Q5R1H8 Ocel1-201ENSMUST00000002469 1611 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trav8d-1Q5R1H8 Scyl1-201ENSMUST00000025890 2637 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trav8d-1Q5R1H8 Lrrc42-201ENSMUST00000030360 1755 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trav8d-1Q5R1H8 Mrps33-201ENSMUST00000031978 1107 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trav8d-1Q5R1H8 Apoa4-201ENSMUST00000034585 1815 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trav8d-1Q5R1H8 Thrsp-201ENSMUST00000043077 1277 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trav8d-1Q5R1H8 T-201ENSMUST00000074667 2046 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trav8d-1Q5R1H8 Mrpl43-201ENSMUST00000097715 1213 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trav8d-1Q5R1H8 4833422C13Rik-201ENSMUST00000099331 2083 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Trav8d-1Q5R1H8 Ppp1r15b-201ENSMUST00000052529 5594 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trav8d-1Q5R1H8 Eif4g1-203ENSMUST00000115457 5440 ntAPPRIS ALT2 TSL 5 BASIC12.75□□□□□ -0.37
Trav8d-1Q5R1H8 Abr-203ENSMUST00000094012 5236 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Trav8d-1Q5R1H8 Nck1-202ENSMUST00000116522 4476 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trav8d-1Q5R1H8 Zfp395-201ENSMUST00000066994 4229 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trav8d-1Q5R1H8 Ccny-201ENSMUST00000053917 4017 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trav8d-1Q5R1H8 Khdrbs1-201ENSMUST00000066257 3738 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trav8d-1Q5R1H8 Gm10605-202ENSMUST00000183019 3198 ntBASIC12.75□□□□□ -0.37
Trav8d-1Q5R1H8 Slc44a3-201ENSMUST00000039197 2620 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trav8d-1Q5R1H8 Zkscan3-201ENSMUST00000070785 2561 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trav8d-1Q5R1H8 Fgf5-201ENSMUST00000031280 2501 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trav8d-1Q5R1H8 Tdrd6-203ENSMUST00000168073 7062 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trav8d-1Q5R1H8 Tdrd6-201ENSMUST00000045717 7055 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trav8d-1Q5R1H8 Arhgef25-201ENSMUST00000019611 2218 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trav8d-1Q5R1H8 Gm15939-201ENSMUST00000160756 2147 ntTSL 5 BASIC12.74□□□□□ -0.37
Trav8d-1Q5R1H8 Pik3c2b-201ENSMUST00000077730 7928 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
Trav8d-1Q5R1H8 Tor1aip1-201ENSMUST00000027738 1952 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trav8d-1Q5R1H8 Stam2-202ENSMUST00000127316 1928 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Trav8d-1Q5R1H8 Cd82-205ENSMUST00000116457 1683 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trav8d-1Q5R1H8 Cbfa2t3-201ENSMUST00000006525 3161 ntAPPRIS ALT2 TSL 2 BASIC12.74□□□□□ -0.37
Trav8d-1Q5R1H8 Gm20460-201ENSMUST00000168709 1572 ntTSL 5 BASIC12.74□□□□□ -0.37
Trav8d-1Q5R1H8 AC154855.1-201ENSMUST00000227353 1458 ntBASIC12.74□□□□□ -0.37
Trav8d-1Q5R1H8 Ghr-201ENSMUST00000069451 4175 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trav8d-1Q5R1H8 Derl3-201ENSMUST00000009236 1321 ntAPPRIS P2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trav8d-1Q5R1H8 Mocs1-201ENSMUST00000024797 2646 ntTSL 5 BASIC12.74□□□□□ -0.37
Trav8d-1Q5R1H8 1700024G13Rik-201ENSMUST00000100723 850 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trav8d-1Q5R1H8 Gm14464-201ENSMUST00000119658 1254 ntBASIC12.74□□□□□ -0.37
Trav8d-1Q5R1H8 Cldn18-203ENSMUST00000131922 860 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Trav8d-1Q5R1H8 Cdpf1-204ENSMUST00000144067 761 ntAPPRIS P1 TSL 2 BASIC12.74□□□□□ -0.37
Trav8d-1Q5R1H8 Muc2-203ENSMUST00000179227 399 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Trav8d-1Q5R1H8 Cnn1-203ENSMUST00000214601 1225 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 65 ms