Protein–RNA interactions for Protein: Q5H8C4

Vps13a, Vacuolar protein sorting-associated protein 13A, mousemouse

Predictions only

Length 3,166 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps13aQ5H8C4 Sqstm1-201ENSMUST00000015981 2673 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Vps13aQ5H8C4 AC131104.1-201ENSMUST00000222118 1739 ntTSL 5 BASIC15.24■□□□□ 0.03
Vps13aQ5H8C4 Srrm1-208ENSMUST00000136342 3152 ntAPPRIS P3 TSL 5 BASIC15.24■□□□□ 0.03
Vps13aQ5H8C4 Wipf1-202ENSMUST00000102679 2039 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Vps13aQ5H8C4 Gm18737-201ENSMUST00000173594 937 ntBASIC15.24■□□□□ 0.03
Vps13aQ5H8C4 Gm2272-201ENSMUST00000194903 582 ntBASIC15.24■□□□□ 0.03
Vps13aQ5H8C4 Sctr-202ENSMUST00000189037 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Vps13aQ5H8C4 Map2k5-201ENSMUST00000034920 2310 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Vps13aQ5H8C4 Egfl7-202ENSMUST00000102907 1372 ntAPPRIS P4 TSL 1 (best) BASIC15.24■□□□□ 0.03
Vps13aQ5H8C4 Hook2-201ENSMUST00000064495 2580 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Vps13aQ5H8C4 Pspc1-202ENSMUST00000163924 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Vps13aQ5H8C4 2310011J03Rik-201ENSMUST00000020341 1649 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Vps13aQ5H8C4 Unc50-202ENSMUST00000114925 1094 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Vps13aQ5H8C4 Gm11918-201ENSMUST00000121660 179 ntBASIC15.24■□□□□ 0.03
Vps13aQ5H8C4 Gm18049-201ENSMUST00000208909 581 ntBASIC15.24■□□□□ 0.03
Vps13aQ5H8C4 Pdlim7-202ENSMUST00000069929 899 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Vps13aQ5H8C4 G0s2-201ENSMUST00000009777 871 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Vps13aQ5H8C4 Nploc4-202ENSMUST00000103017 4025 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Vps13aQ5H8C4 4933415F23Rik-201ENSMUST00000073179 1781 ntAPPRIS P1 BASIC15.24■□□□□ 0.03
Vps13aQ5H8C4 Jakmip1-202ENSMUST00000121010 2496 ntTSL 5 BASIC15.24■□□□□ 0.03
Vps13aQ5H8C4 Gid8-201ENSMUST00000029090 1655 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Vps13aQ5H8C4 Mfsd4b1-201ENSMUST00000163705 2677 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Vps13aQ5H8C4 Ifngr1-201ENSMUST00000020188 2112 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Vps13aQ5H8C4 Trim63-201ENSMUST00000030638 1855 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
Vps13aQ5H8C4 Gm10406-202ENSMUST00000170738 1955 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
Vps13aQ5H8C4 Nsd3-207ENSMUST00000143445 2416 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Vps13aQ5H8C4 Irak1-201ENSMUST00000033769 2890 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Vps13aQ5H8C4 Nadk2-203ENSMUST00000100790 3665 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
Vps13aQ5H8C4 Ece2-202ENSMUST00000122306 2495 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Vps13aQ5H8C4 Deaf1-209ENSMUST00000211537 2882 ntTSL 2 BASIC15.23■□□□□ 0.03
Vps13aQ5H8C4 Efhd1-201ENSMUST00000027472 1854 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Vps13aQ5H8C4 Bola2-202ENSMUST00000106369 642 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Vps13aQ5H8C4 Rps13-ps4-201ENSMUST00000117927 456 ntBASIC15.23■□□□□ 0.03
Vps13aQ5H8C4 Rps13-ps5-201ENSMUST00000117939 456 ntBASIC15.23■□□□□ 0.03
Vps13aQ5H8C4 Gm15483-201ENSMUST00000120338 456 ntBASIC15.23■□□□□ 0.03
Vps13aQ5H8C4 Gm3893-201ENSMUST00000178882 909 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
Vps13aQ5H8C4 Gm26871-201ENSMUST00000180593 700 ntTSL 3 BASIC15.23■□□□□ 0.03
Vps13aQ5H8C4 Tmem170-201ENSMUST00000034431 3878 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Vps13aQ5H8C4 Eif4h-201ENSMUST00000036125 2367 ntAPPRIS ALT1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Vps13aQ5H8C4 Id2-202ENSMUST00000221761 1969 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
Vps13aQ5H8C4 Gm16000-201ENSMUST00000146657 447 ntTSL 2 BASIC15.23■□□□□ 0.03
Vps13aQ5H8C4 4833428L15Rik-201ENSMUST00000181230 1259 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Vps13aQ5H8C4 4933437G19Rik-201ENSMUST00000197910 1178 ntBASIC15.23■□□□□ 0.03
Vps13aQ5H8C4 2610008E11Rik-204ENSMUST00000220220 799 ntTSL 2 BASIC15.23■□□□□ 0.03
Vps13aQ5H8C4 Guca2b-201ENSMUST00000044426 605 ntAPPRIS P2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Vps13aQ5H8C4 Lce3a-201ENSMUST00000067318 549 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Vps13aQ5H8C4 Pdlim7-203ENSMUST00000069968 1006 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Vps13aQ5H8C4 Wdr12-202ENSMUST00000117438 3251 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Vps13aQ5H8C4 Pou5f1-201ENSMUST00000025271 1362 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Vps13aQ5H8C4 Shc1-202ENSMUST00000094378 2617 ntAPPRIS ALT1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Vps13aQ5H8C4 Map6-207ENSMUST00000208924 2906 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Vps13aQ5H8C4 Abhd11-202ENSMUST00000111216 972 ntTSL 3 BASIC15.22■□□□□ 0.03
Vps13aQ5H8C4 Gm13344-201ENSMUST00000137714 1557 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Vps13aQ5H8C4 Pantr2-201ENSMUST00000180589 463 ntTSL 3 BASIC15.22■□□□□ 0.03
Vps13aQ5H8C4 9430007M09Rik-201ENSMUST00000201947 804 ntBASIC15.22■□□□□ 0.03
Vps13aQ5H8C4 Fbxl21-201ENSMUST00000045428 1965 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Vps13aQ5H8C4 Cdadc1-201ENSMUST00000022555 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Vps13aQ5H8C4 5730559C18Rik-201ENSMUST00000120339 2988 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Vps13aQ5H8C4 Npas3-203ENSMUST00000223057 2724 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
Vps13aQ5H8C4 Atg5-201ENSMUST00000039286 2352 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Vps13aQ5H8C4 Gprc5c-208ENSMUST00000177952 1809 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
Vps13aQ5H8C4 Gm4204-201ENSMUST00000110798 1231 ntBASIC15.22■□□□□ 0.03
Vps13aQ5H8C4 Gm7030-203ENSMUST00000173322 913 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Vps13aQ5H8C4 1700072B07Rik-201ENSMUST00000191141 445 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Vps13aQ5H8C4 2900022M07Rik-201ENSMUST00000193912 1017 ntBASIC15.22■□□□□ 0.03
Vps13aQ5H8C4 Gm7030-201ENSMUST00000046131 913 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
Vps13aQ5H8C4 Gm15408-201ENSMUST00000124198 1379 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Vps13aQ5H8C4 Gm19684-201ENSMUST00000173128 1611 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Vps13aQ5H8C4 Lman1-202ENSMUST00000120461 2208 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Vps13aQ5H8C4 Irx4-202ENSMUST00000176684 2384 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
Vps13aQ5H8C4 1700049J03Rik-201ENSMUST00000011196 421 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Vps13aQ5H8C4 3110009E18Rik-203ENSMUST00000112644 488 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Vps13aQ5H8C4 Rasgrp2-205ENSMUST00000113471 535 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Vps13aQ5H8C4 Fbxw4-204ENSMUST00000160018 931 ntTSL 3 BASIC15.22■□□□□ 0.03
Vps13aQ5H8C4 Gm29542-201ENSMUST00000186876 704 ntTSL 3 BASIC15.22■□□□□ 0.03
Vps13aQ5H8C4 Gm18018-201ENSMUST00000198273 408 ntBASIC15.22■□□□□ 0.03
Vps13aQ5H8C4 Scgb3a2-201ENSMUST00000043803 842 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Vps13aQ5H8C4 Tigd3-201ENSMUST00000055911 2114 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Vps13aQ5H8C4 Gal3st4-202ENSMUST00000161279 2059 ntAPPRIS P3 TSL 3 BASIC15.21■□□□□ 0.03
Vps13aQ5H8C4 Slc35e4-202ENSMUST00000109995 3063 ntAPPRIS ALT1 TSL 5 BASIC15.21■□□□□ 0.03
Vps13aQ5H8C4 Slc35e4-201ENSMUST00000051207 3059 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Vps13aQ5H8C4 Hmga1b-201ENSMUST00000105046 1626 ntAPPRIS P1 BASIC15.21■□□□□ 0.03
Vps13aQ5H8C4 Gm6598-201ENSMUST00000202719 2615 ntBASIC15.21■□□□□ 0.03
Vps13aQ5H8C4 Rgs9-202ENSMUST00000103062 1743 ntTSL 5 BASIC15.21■□□□□ 0.03
Vps13aQ5H8C4 Olfr1214-201ENSMUST00000099804 936 ntAPPRIS P1 BASIC15.21■□□□□ 0.03
Vps13aQ5H8C4 Prdm12-201ENSMUST00000113470 2471 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
Vps13aQ5H8C4 Nfe2l1-202ENSMUST00000107657 3869 ntAPPRIS P3 TSL 5 BASIC15.21■□□□□ 0.03
Vps13aQ5H8C4 Rcc1-201ENSMUST00000030726 2278 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Vps13aQ5H8C4 Ckap4-201ENSMUST00000053871 3089 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Vps13aQ5H8C4 Cpne6-207ENSMUST00000171643 2016 ntAPPRIS P3 TSL 5 BASIC15.21■□□□□ 0.03
Vps13aQ5H8C4 Ddx50-201ENSMUST00000020270 2535 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Vps13aQ5H8C4 Gm16026-204ENSMUST00000162652 683 ntBASIC15.21■□□□□ 0.03
Vps13aQ5H8C4 1700123K08Rik-201ENSMUST00000031501 1047 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Vps13aQ5H8C4 Ddx39-202ENSMUST00000109810 1794 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
Vps13aQ5H8C4 Ebf1-203ENSMUST00000109268 2864 ntAPPRIS ALT1 TSL 5 BASIC15.21■□□□□ 0.02
Vps13aQ5H8C4 Tbc1d20-201ENSMUST00000028963 3386 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Vps13aQ5H8C4 Tle2-205ENSMUST00000135211 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.02
Vps13aQ5H8C4 Gm29208-203ENSMUST00000213687 2219 ntTSL 5 BASIC15.21■□□□□ 0.02
Vps13aQ5H8C4 Fbxo15-204ENSMUST00000224467 1908 ntAPPRIS ALT2 BASIC15.21■□□□□ 0.02
Vps13aQ5H8C4 Nfib-204ENSMUST00000107246 3075 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
Retrieved 100 of 76,532 protein–RNA pairs in 31.4 ms