Protein–RNA interactions for Protein: Q4VBF2

R3hdm4, R3H domain-containing protein 4, mousemouse

Predictions only

Length 262 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
R3hdm4Q4VBF2 Nfkbid-202ENSMUST00000108175 2000 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
R3hdm4Q4VBF2 Tapt1-201ENSMUST00000055128 3513 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
R3hdm4Q4VBF2 Bclaf3-202ENSMUST00000112464 3366 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
R3hdm4Q4VBF2 Arl4a-201ENSMUST00000101472 1200 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
R3hdm4Q4VBF2 Gm6184-201ENSMUST00000120403 1261 ntBASIC16.72■□□□□ 0.27
R3hdm4Q4VBF2 Frs3os-201ENSMUST00000136531 978 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
R3hdm4Q4VBF2 Gm18733-201ENSMUST00000173950 856 ntBASIC16.72■□□□□ 0.27
R3hdm4Q4VBF2 4930519L02Rik-201ENSMUST00000197683 619 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
R3hdm4Q4VBF2 Tmem270-202ENSMUST00000201316 847 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
R3hdm4Q4VBF2 Gm2270-201ENSMUST00000222858 797 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
R3hdm4Q4VBF2 Wdyhv1-204ENSMUST00000226955 1094 ntBASIC16.72■□□□□ 0.27
R3hdm4Q4VBF2 Gjb6-201ENSMUST00000039380 2105 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
R3hdm4Q4VBF2 Eif4g3-202ENSMUST00000084214 6139 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
R3hdm4Q4VBF2 Fgfr4-201ENSMUST00000005452 3324 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
R3hdm4Q4VBF2 Plcxd1-201ENSMUST00000086687 1346 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
R3hdm4Q4VBF2 Med7-203ENSMUST00000109232 2547 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
R3hdm4Q4VBF2 Stat3-207ENSMUST00000138438 2506 ntTSL 5 BASIC16.71■□□□□ 0.27
R3hdm4Q4VBF2 Exoc6-201ENSMUST00000066439 2729 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
R3hdm4Q4VBF2 Gm26547-201ENSMUST00000181186 1508 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
R3hdm4Q4VBF2 Car7-201ENSMUST00000056051 1538 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
R3hdm4Q4VBF2 Otol1-201ENSMUST00000053013 2161 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
R3hdm4Q4VBF2 Nat8l-201ENSMUST00000056355 6529 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
R3hdm4Q4VBF2 Slc6a11-201ENSMUST00000032451 4132 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
R3hdm4Q4VBF2 Kdm5b-203ENSMUST00000112198 5413 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
R3hdm4Q4VBF2 Safb-207ENSMUST00000182533 3122 ntAPPRIS ALT2 TSL 5 BASIC16.71■□□□□ 0.27
R3hdm4Q4VBF2 Gm15998-201ENSMUST00000135144 1844 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
R3hdm4Q4VBF2 Rbmx-206ENSMUST00000143310 1296 ntTSL 5 BASIC16.71■□□□□ 0.27
R3hdm4Q4VBF2 Flg-204ENSMUST00000178752 756 ntAPPRIS ALT2 BASIC16.71■□□□□ 0.27
R3hdm4Q4VBF2 Gm27628-201ENSMUST00000184911 107 ntBASIC16.71■□□□□ 0.27
R3hdm4Q4VBF2 2810030D12Rik-203ENSMUST00000190461 1039 ntBASIC16.71■□□□□ 0.27
R3hdm4Q4VBF2 Pih1d1-206ENSMUST00000210139 1077 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
R3hdm4Q4VBF2 Cela3a-201ENSMUST00000024200 958 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
R3hdm4Q4VBF2 Tmem57-201ENSMUST00000030628 3826 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
R3hdm4Q4VBF2 Galnt6os-201ENSMUST00000160960 1389 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
R3hdm4Q4VBF2 Aldh1a3-203ENSMUST00000174209 1496 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
R3hdm4Q4VBF2 Alg3-201ENSMUST00000045918 1451 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
R3hdm4Q4VBF2 Gpr3-202ENSMUST00000105911 2518 ntAPPRIS P1 BASIC16.71■□□□□ 0.27
R3hdm4Q4VBF2 Majin-202ENSMUST00000113528 1562 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
R3hdm4Q4VBF2 Unc13b-201ENSMUST00000079978 6354 ntAPPRIS P2 TSL 5 BASIC16.71■□□□□ 0.27
R3hdm4Q4VBF2 Gm10564-201ENSMUST00000097750 3113 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
R3hdm4Q4VBF2 Gclc-201ENSMUST00000034905 3423 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
R3hdm4Q4VBF2 Tcea1-202ENSMUST00000165720 2854 ntTSL 5 BASIC16.71■□□□□ 0.26
R3hdm4Q4VBF2 Mbd6-201ENSMUST00000026476 4165 ntAPPRIS P3 TSL 5 BASIC16.7■□□□□ 0.26
R3hdm4Q4VBF2 Smad3-201ENSMUST00000034973 5090 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
R3hdm4Q4VBF2 Gfm2-211ENSMUST00000161913 1829 ntTSL 2 BASIC16.7■□□□□ 0.26
R3hdm4Q4VBF2 Gm27528-202ENSMUST00000222916 2012 ntBASIC16.7■□□□□ 0.26
R3hdm4Q4VBF2 Usp43-202ENSMUST00000108677 4447 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
R3hdm4Q4VBF2 Grm4-201ENSMUST00000118161 4537 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
R3hdm4Q4VBF2 Arsi-201ENSMUST00000040359 2975 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
R3hdm4Q4VBF2 Nodal-201ENSMUST00000049339 2095 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
R3hdm4Q4VBF2 AC154527.4-201ENSMUST00000224364 1667 ntBASIC16.7■□□□□ 0.26
R3hdm4Q4VBF2 Ptpn2-201ENSMUST00000025420 1568 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
R3hdm4Q4VBF2 Rab3a-201ENSMUST00000034301 1363 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
R3hdm4Q4VBF2 Olfr55-201ENSMUST00000112168 948 ntAPPRIS P1 BASIC16.7■□□□□ 0.26
R3hdm4Q4VBF2 Myo5a-214ENSMUST00000155282 6372 ntAPPRIS P5 TSL 5 BASIC16.7■□□□□ 0.26
R3hdm4Q4VBF2 Gm15598-201ENSMUST00000156965 763 ntTSL 5 BASIC16.7■□□□□ 0.26
R3hdm4Q4VBF2 4930442P19Rik-201ENSMUST00000193163 1240 ntBASIC16.7■□□□□ 0.26
R3hdm4Q4VBF2 Shisa5-218ENSMUST00000200515 1005 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
R3hdm4Q4VBF2 Gm45167-201ENSMUST00000208007 322 ntBASIC16.7■□□□□ 0.26
R3hdm4Q4VBF2 Gsdmcl1-201ENSMUST00000071847 1133 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
R3hdm4Q4VBF2 Mkrn3-201ENSMUST00000094340 2547 ntAPPRIS P1 BASIC16.7■□□□□ 0.26
R3hdm4Q4VBF2 Max-202ENSMUST00000110395 1942 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
R3hdm4Q4VBF2 Cuedc1-201ENSMUST00000018522 3180 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
R3hdm4Q4VBF2 Ttll11-202ENSMUST00000112976 3077 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
R3hdm4Q4VBF2 Rmdn1-201ENSMUST00000029888 1734 ntAPPRIS P2 TSL 1 (best) BASIC16.7■□□□□ 0.26
R3hdm4Q4VBF2 A230072C01Rik-202ENSMUST00000136447 1412 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
R3hdm4Q4VBF2 Dffb-201ENSMUST00000030893 2093 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
R3hdm4Q4VBF2 Pld2-202ENSMUST00000108556 3391 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
R3hdm4Q4VBF2 Zfp422-203ENSMUST00000112880 2523 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
R3hdm4Q4VBF2 Msl1-201ENSMUST00000037915 4593 ntAPPRIS P2 TSL 1 (best) BASIC16.69■□□□□ 0.26
R3hdm4Q4VBF2 Gtdc1-202ENSMUST00000100127 2422 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
R3hdm4Q4VBF2 Klc4-201ENSMUST00000003642 2322 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
R3hdm4Q4VBF2 Foxo3-201ENSMUST00000056974 2889 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
R3hdm4Q4VBF2 Bnc1-201ENSMUST00000026096 4646 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
R3hdm4Q4VBF2 Sec31a-201ENSMUST00000094578 4228 ntAPPRIS P2 TSL 5 BASIC16.69■□□□□ 0.26
R3hdm4Q4VBF2 Nap1l1-206ENSMUST00000219143 1365 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
R3hdm4Q4VBF2 Ppfia3-207ENSMUST00000211067 4565 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
R3hdm4Q4VBF2 Tead2-203ENSMUST00000107801 3396 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
R3hdm4Q4VBF2 Dnajc2-202ENSMUST00000115192 1132 ntTSL 2 BASIC16.69■□□□□ 0.26
R3hdm4Q4VBF2 9130204K15Rik-201ENSMUST00000131441 867 ntTSL 5 BASIC16.69■□□□□ 0.26
R3hdm4Q4VBF2 Gm11750-201ENSMUST00000146016 583 ntTSL 5 BASIC16.69■□□□□ 0.26
R3hdm4Q4VBF2 Egfl8-201ENSMUST00000015611 1150 ntAPPRIS P2 TSL 1 (best) BASIC16.69■□□□□ 0.26
R3hdm4Q4VBF2 Gm28577-201ENSMUST00000176106 741 ntTSL 5 BASIC16.69■□□□□ 0.26
R3hdm4Q4VBF2 Gm5253-201ENSMUST00000187104 1025 ntBASIC16.69■□□□□ 0.26
R3hdm4Q4VBF2 1810008I18Rik-202ENSMUST00000187848 819 ntTSL 3 BASIC16.69■□□□□ 0.26
R3hdm4Q4VBF2 Gm9682-201ENSMUST00000197505 556 ntBASIC16.69■□□□□ 0.26
R3hdm4Q4VBF2 4931406C07Rik-209ENSMUST00000217042 691 ntTSL 3 BASIC16.69■□□□□ 0.26
R3hdm4Q4VBF2 Gm20337-201ENSMUST00000219062 1118 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
R3hdm4Q4VBF2 Gm40849-201ENSMUST00000222330 603 ntTSL 3 BASIC16.69■□□□□ 0.26
R3hdm4Q4VBF2 6030408B16Rik-201ENSMUST00000071328 1155 ntAPPRIS ALT2 TSL 5 BASIC16.69■□□□□ 0.26
R3hdm4Q4VBF2 Egfl8-202ENSMUST00000097345 1064 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
R3hdm4Q4VBF2 Inpp5f-201ENSMUST00000043138 4734 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
R3hdm4Q4VBF2 Foxp4-201ENSMUST00000097311 3197 ntAPPRIS P4 TSL 1 (best) BASIC16.69■□□□□ 0.26
R3hdm4Q4VBF2 Snx8-201ENSMUST00000031539 2627 ntAPPRIS P2 TSL 1 (best) BASIC16.69■□□□□ 0.26
R3hdm4Q4VBF2 Pde4d-207ENSMUST00000120664 4207 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
R3hdm4Q4VBF2 Tubgcp4-202ENSMUST00000110657 1992 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
R3hdm4Q4VBF2 Crem-234ENSMUST00000154470 1996 ntTSL 5 BASIC16.69■□□□□ 0.26
R3hdm4Q4VBF2 4933426K07Rik-201ENSMUST00000143009 1548 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
R3hdm4Q4VBF2 Hps5-202ENSMUST00000107653 4702 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
R3hdm4Q4VBF2 Itsn1-203ENSMUST00000095909 6103 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Retrieved 100 of 76,532 protein–RNA pairs in 19.7 ms