Protein–RNA interactions for Protein: Q4FZF3

Ddx49, Probable ATP-dependent RNA helicase DDX49, mousemouse

Known RBP Predictions only

Length 480 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx49Q4FZF3 Xpo6-213ENSMUST00000168189 4552 ntAPPRIS ALT1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Ddx49Q4FZF3 Isoc2a-201ENSMUST00000125249 2244 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Ddx49Q4FZF3 Zkscan2-203ENSMUST00000128217 2218 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Ddx49Q4FZF3 Serinc2-203ENSMUST00000122374 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
Ddx49Q4FZF3 Cbl-204ENSMUST00000205968 2809 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Ddx49Q4FZF3 Fbxl12os-202ENSMUST00000136376 2349 ntTSL 2 BASIC18.03■□□□□ 0.48
Ddx49Q4FZF3 Shank3-202ENSMUST00000066545 4702 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Ddx49Q4FZF3 Rnf220-203ENSMUST00000102690 1842 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
Ddx49Q4FZF3 Ldha-210ENSMUST00000209984 1815 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
Ddx49Q4FZF3 Adamts17-202ENSMUST00000107478 6416 ntAPPRIS ALT2 TSL 5 BASIC18.02■□□□□ 0.48
Ddx49Q4FZF3 Gm11841-201ENSMUST00000117060 1963 ntBASIC18.02■□□□□ 0.48
Ddx49Q4FZF3 Pcdhb22-201ENSMUST00000097609 2266 ntTSL 2 BASIC18.02■□□□□ 0.48
Ddx49Q4FZF3 Polr3e-203ENSMUST00000207481 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
Ddx49Q4FZF3 Zic5-201ENSMUST00000039118 4767 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Ddx49Q4FZF3 Fhl1-203ENSMUST00000114769 2770 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
Ddx49Q4FZF3 Nnat-209ENSMUST00000173793 386 ntTSL 5 BASIC18.02■□□□□ 0.48
Ddx49Q4FZF3 Gm22175-201ENSMUST00000175007 78 ntBASIC18.02■□□□□ 0.48
Ddx49Q4FZF3 Large2-215ENSMUST00000176810 2477 ntAPPRIS ALT2 TSL 5 BASIC18.02■□□□□ 0.48
Ddx49Q4FZF3 Nkpd1-202ENSMUST00000207576 2916 ntAPPRIS P2 TSL 5 BASIC18.02■□□□□ 0.48
Ddx49Q4FZF3 Cd3g-201ENSMUST00000002101 1023 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Ddx49Q4FZF3 AC121788.1-202ENSMUST00000218801 871 ntTSL 5 BASIC18.02■□□□□ 0.48
Ddx49Q4FZF3 Syce1l-201ENSMUST00000034219 896 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
Ddx49Q4FZF3 Syce1l-202ENSMUST00000095173 791 ntAPPRIS P4 TSL 1 (best) BASIC18.02■□□□□ 0.48
Ddx49Q4FZF3 Sdk1-202ENSMUST00000085774 10352 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Ddx49Q4FZF3 Wnt10b-206ENSMUST00000228546 2709 ntBASIC18.02■□□□□ 0.48
Ddx49Q4FZF3 Ubp1-202ENSMUST00000084885 3850 ntAPPRIS P4 TSL 5 BASIC18.02■□□□□ 0.47
Ddx49Q4FZF3 Klf9-201ENSMUST00000036884 3263 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
Ddx49Q4FZF3 Kif5b-201ENSMUST00000025083 6032 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
Ddx49Q4FZF3 Brpf1-202ENSMUST00000113119 4826 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.47
Ddx49Q4FZF3 Grb7-201ENSMUST00000019456 2397 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
Ddx49Q4FZF3 Dlx1-201ENSMUST00000037119 4111 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Ddx49Q4FZF3 Psmb10-201ENSMUST00000034369 1311 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Ddx49Q4FZF3 Letmd1-201ENSMUST00000037001 2579 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Ddx49Q4FZF3 Wapl-201ENSMUST00000048263 6351 ntAPPRIS P3 TSL 1 (best) BASIC18.01■□□□□ 0.47
Ddx49Q4FZF3 Susd3-202ENSMUST00000058196 1418 ntAPPRIS P3 TSL 1 (best) BASIC18.01■□□□□ 0.47
Ddx49Q4FZF3 Lrrfip2-207ENSMUST00000197256 1819 ntTSL 5 BASIC18.01■□□□□ 0.47
Ddx49Q4FZF3 Gm6257-201ENSMUST00000163864 910 ntBASIC18.01■□□□□ 0.47
Ddx49Q4FZF3 Mpped1-210ENSMUST00000172115 795 ntTSL 3 BASIC18.01■□□□□ 0.47
Ddx49Q4FZF3 Mpped1-211ENSMUST00000172398 795 ntTSL 3 BASIC18.01■□□□□ 0.47
Ddx49Q4FZF3 Gm26854-201ENSMUST00000180418 705 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Ddx49Q4FZF3 Bpnt1-205ENSMUST00000210277 1226 ntTSL 5 BASIC18.01■□□□□ 0.47
Ddx49Q4FZF3 Ccdc182-201ENSMUST00000037268 1204 ntAPPRIS P1 BASIC18.01■□□□□ 0.47
Ddx49Q4FZF3 Gm9945-201ENSMUST00000067523 932 ntAPPRIS P1 BASIC18.01■□□□□ 0.47
Ddx49Q4FZF3 Rarg-202ENSMUST00000063339 2718 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
Ddx49Q4FZF3 Lhx3-202ENSMUST00000054099 2184 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Ddx49Q4FZF3 Kcnq2-201ENSMUST00000016491 3067 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Ddx49Q4FZF3 App-201ENSMUST00000005406 3176 ntAPPRIS P2 TSL 1 (best) BASIC18.01■□□□□ 0.47
Ddx49Q4FZF3 Anapc5-201ENSMUST00000086216 2760 ntAPPRIS P3 TSL 1 (best) BASIC18.01■□□□□ 0.47
Ddx49Q4FZF3 Zdhhc18-201ENSMUST00000084238 4580 ntAPPRIS P1 TSL 2 BASIC18.01■□□□□ 0.47
Ddx49Q4FZF3 Cgn-204ENSMUST00000155485 2361 ntTSL 2 BASIC18.01■□□□□ 0.47
Ddx49Q4FZF3 Rbpms-201ENSMUST00000033994 2375 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Ddx49Q4FZF3 Trmt2a-202ENSMUST00000100099 2235 ntAPPRIS P5 TSL 1 (best) BASIC18■□□□□ 0.47
Ddx49Q4FZF3 Pcmt1-202ENSMUST00000159917 2491 ntAPPRIS P3 TSL 1 (best) BASIC18■□□□□ 0.47
Ddx49Q4FZF3 Renbp-201ENSMUST00000114379 1318 ntTSL 1 (best) BASIC18■□□□□ 0.47
Ddx49Q4FZF3 Thap6-204ENSMUST00000193925 1337 ntTSL 1 (best) BASIC18■□□□□ 0.47
Ddx49Q4FZF3 Gm26728-202ENSMUST00000203423 1333 ntTSL 1 (best) BASIC18■□□□□ 0.47
Ddx49Q4FZF3 Coq10a-205ENSMUST00000220027 1307 ntAPPRIS ALT2 TSL 5 BASIC18■□□□□ 0.47
Ddx49Q4FZF3 Gnb3-201ENSMUST00000024206 1846 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Ddx49Q4FZF3 Rbfox2-204ENSMUST00000171751 3558 ntTSL 1 (best) BASIC18■□□□□ 0.47
Ddx49Q4FZF3 Fmnl3-203ENSMUST00000120633 4290 ntAPPRIS ALT2 TSL 5 BASIC18■□□□□ 0.47
Ddx49Q4FZF3 Btbd10-203ENSMUST00000119278 2394 ntTSL 5 BASIC18■□□□□ 0.47
Ddx49Q4FZF3 Rab6a-201ENSMUST00000032946 3214 ntAPPRIS P3 TSL 1 (best) BASIC18■□□□□ 0.47
Ddx49Q4FZF3 Rerg-203ENSMUST00000119610 890 ntTSL 3 BASIC18■□□□□ 0.47
Ddx49Q4FZF3 Mmab-203ENSMUST00000123256 1277 ntTSL 1 (best) BASIC18■□□□□ 0.47
Ddx49Q4FZF3 Gm14321-202ENSMUST00000139927 351 ntTSL 5 BASIC18■□□□□ 0.47
Ddx49Q4FZF3 Ube2i-208ENSMUST00000173084 1286 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Ddx49Q4FZF3 Plpp4-203ENSMUST00000205896 714 ntTSL 5 BASIC18■□□□□ 0.47
Ddx49Q4FZF3 4930448E22Rik-202ENSMUST00000215242 2102 ntTSL 5 BASIC18■□□□□ 0.47
Ddx49Q4FZF3 Gm18246-201ENSMUST00000221023 728 ntBASIC18■□□□□ 0.47
Ddx49Q4FZF3 Tssk3-201ENSMUST00000000421 1280 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Ddx49Q4FZF3 Gpr146-202ENSMUST00000053120 1040 ntBASIC18■□□□□ 0.47
Ddx49Q4FZF3 Rxfp4-201ENSMUST00000063119 1245 ntAPPRIS P1 BASIC18■□□□□ 0.47
Ddx49Q4FZF3 Zmym3-206ENSMUST00000120107 5882 ntAPPRIS ALT2 TSL 5 BASIC18■□□□□ 0.47
Ddx49Q4FZF3 Sigirr-206ENSMUST00000210167 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
Ddx49Q4FZF3 Fam76a-202ENSMUST00000097856 1863 ntTSL 1 (best) BASIC18■□□□□ 0.47
Ddx49Q4FZF3 Ripk1-201ENSMUST00000021844 3266 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Ddx49Q4FZF3 Gch1-201ENSMUST00000089959 2775 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Ddx49Q4FZF3 Traf2-202ENSMUST00000114234 2151 ntAPPRIS ALT2 TSL 5 BASIC18■□□□□ 0.47
Ddx49Q4FZF3 Vps37a-201ENSMUST00000098817 6379 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Ddx49Q4FZF3 Pnliprp2-201ENSMUST00000026081 1567 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Ddx49Q4FZF3 Snx16-201ENSMUST00000029047 2288 ntAPPRIS P3 TSL 1 (best) BASIC18■□□□□ 0.47
Ddx49Q4FZF3 Gm36858-201ENSMUST00000194501 2391 ntBASIC17.99■□□□□ 0.47
Ddx49Q4FZF3 E230025N22Rik-201ENSMUST00000115682 2016 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Ddx49Q4FZF3 Fam170b-201ENSMUST00000104926 1694 ntAPPRIS P1 TSL 2 BASIC17.99■□□□□ 0.47
Ddx49Q4FZF3 Gm5069-201ENSMUST00000050581 1328 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Ddx49Q4FZF3 Zyx-205ENSMUST00000203401 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
Ddx49Q4FZF3 Zic3-202ENSMUST00000088629 1951 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Ddx49Q4FZF3 Katnbl1-201ENSMUST00000028552 2886 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Ddx49Q4FZF3 Capzb-202ENSMUST00000042675 1604 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Ddx49Q4FZF3 Hmgn1-201ENSMUST00000050884 2174 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Ddx49Q4FZF3 Bpifb3-202ENSMUST00000109760 1741 ntAPPRIS P1 TSL 5 BASIC17.99■□□□□ 0.47
Ddx49Q4FZF3 Rexo1-201ENSMUST00000057910 5250 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Ddx49Q4FZF3 Rpl37rt-201ENSMUST00000100847 682 ntTSL 3 BASIC17.99■□□□□ 0.47
Ddx49Q4FZF3 Mir449b-201ENSMUST00000104833 80 ntBASIC17.99■□□□□ 0.47
Ddx49Q4FZF3 Gpx4-207ENSMUST00000183037 735 ntTSL 2 BASIC17.99■□□□□ 0.47
Ddx49Q4FZF3 AC124732.2-201ENSMUST00000221977 316 ntBASIC17.99■□□□□ 0.47
Ddx49Q4FZF3 Gm5626-201ENSMUST00000222151 1058 ntBASIC17.99■□□□□ 0.47
Ddx49Q4FZF3 AC158538.2-201ENSMUST00000225455 906 ntBASIC17.99■□□□□ 0.47
Ddx49Q4FZF3 Gm11937-201ENSMUST00000076478 396 ntAPPRIS P1 BASIC17.99■□□□□ 0.47
Ddx49Q4FZF3 2610318N02Rik-201ENSMUST00000093336 1265 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Retrieved 100 of 76,532 protein–RNA pairs in 37.8 ms