Protein–RNA interactions for Protein: Q4ACU6

Shank3, SH3 and multiple ankyrin repeat domains protein 3, mousemouse

Predictions only

Length 1,730 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shank3Q4ACU6 Tmem38a-201ENSMUST00000034244 2124 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Shank3Q4ACU6 Katnbl1-201ENSMUST00000028552 2886 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Shank3Q4ACU6 Macrod2-206ENSMUST00000110064 4883 ntAPPRIS P2 TSL 1 (best) BASIC19.1■□□□□ 0.65
Shank3Q4ACU6 Armc9-205ENSMUST00000131412 2160 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Shank3Q4ACU6 Gm29667-201ENSMUST00000190817 490 ntBASIC19.1■□□□□ 0.65
Shank3Q4ACU6 AC125350.2-201ENSMUST00000224737 727 ntBASIC19.1■□□□□ 0.65
Shank3Q4ACU6 CT010506.4-201ENSMUST00000225457 351 ntBASIC19.1■□□□□ 0.65
Shank3Q4ACU6 Procr-201ENSMUST00000029140 1597 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Shank3Q4ACU6 Pabpn1l-201ENSMUST00000093059 1148 ntAPPRIS P2 TSL 1 (best) BASIC19.1■□□□□ 0.65
Shank3Q4ACU6 Klhl34-201ENSMUST00000087157 1935 ntAPPRIS P1 BASIC19.1■□□□□ 0.65
Shank3Q4ACU6 Gm13327-201ENSMUST00000133391 2741 ntTSL 5 BASIC19.1■□□□□ 0.65
Shank3Q4ACU6 Mdm1-208ENSMUST00000219087 1318 ntTSL 2 BASIC19.1■□□□□ 0.65
Shank3Q4ACU6 Tead3-201ENSMUST00000114799 2448 ntAPPRIS P2 TSL 1 (best) BASIC19.1■□□□□ 0.65
Shank3Q4ACU6 Gm19439-201ENSMUST00000198195 2273 ntBASIC19.1■□□□□ 0.65
Shank3Q4ACU6 Xrcc6-202ENSMUST00000100399 3296 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Shank3Q4ACU6 Tbc1d13-201ENSMUST00000044556 3595 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Shank3Q4ACU6 Scrt1-202ENSMUST00000164703 3478 ntAPPRIS P1 TSL 2 BASIC19.09■□□□□ 0.65
Shank3Q4ACU6 Pla2g2e-202ENSMUST00000105803 381 ntTSL 5 BASIC19.09■□□□□ 0.65
Shank3Q4ACU6 Gm15222-201ENSMUST00000127359 344 ntTSL 3 BASIC19.09■□□□□ 0.65
Shank3Q4ACU6 Gm7556-201ENSMUST00000201178 1084 ntBASIC19.09■□□□□ 0.65
Shank3Q4ACU6 Gm6218-201ENSMUST00000219812 628 ntBASIC19.09■□□□□ 0.65
Shank3Q4ACU6 Kat2b-201ENSMUST00000000724 4653 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Shank3Q4ACU6 B4galt2-203ENSMUST00000106421 1801 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Shank3Q4ACU6 4930429H19Rik-201ENSMUST00000205260 1818 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Shank3Q4ACU6 Tmprss12-201ENSMUST00000096200 1349 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Shank3Q4ACU6 5730480H06Rik-205ENSMUST00000196950 3300 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Shank3Q4ACU6 Galnt3-201ENSMUST00000028378 3885 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Shank3Q4ACU6 U2af2-209ENSMUST00000209099 2088 ntAPPRIS P3 TSL 1 (best) BASIC19.09■□□□□ 0.65
Shank3Q4ACU6 Hcn2-202ENSMUST00000099513 3195 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Shank3Q4ACU6 Hsd3b7-202ENSMUST00000106271 1713 ntTSL 5 BASIC19.09■□□□□ 0.65
Shank3Q4ACU6 Diaph2-201ENSMUST00000037854 3742 ntAPPRIS P2 TSL 1 (best) BASIC19.09■□□□□ 0.65
Shank3Q4ACU6 Nfib-206ENSMUST00000107248 3294 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Shank3Q4ACU6 Vldlr-202ENSMUST00000047645 3260 ntTSL 5 BASIC19.09■□□□□ 0.65
Shank3Q4ACU6 Atp9a-203ENSMUST00000109176 3691 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Shank3Q4ACU6 Sync-201ENSMUST00000102599 2042 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Shank3Q4ACU6 Gm24543-201ENSMUST00000103867 82 ntBASIC19.08■□□□□ 0.65
Shank3Q4ACU6 Fis1-203ENSMUST00000111097 601 ntTSL 2 BASIC19.08■□□□□ 0.65
Shank3Q4ACU6 Rab11fip4os2-201ENSMUST00000123067 689 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
Shank3Q4ACU6 Fis1-201ENSMUST00000019198 786 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Shank3Q4ACU6 B9d2-202ENSMUST00000205325 593 ntTSL 2 BASIC19.08■□□□□ 0.65
Shank3Q4ACU6 Tspan3-203ENSMUST00000215906 842 ntTSL 3 BASIC19.08■□□□□ 0.65
Shank3Q4ACU6 Olfr750-201ENSMUST00000048478 1132 ntAPPRIS P1 BASIC19.08■□□□□ 0.65
Shank3Q4ACU6 Kmt5b-202ENSMUST00000052699 3290 ntAPPRIS ALT2 TSL 5 BASIC19.08■□□□□ 0.65
Shank3Q4ACU6 Mbl1-202ENSMUST00000225792 1563 ntAPPRIS P1 BASIC19.08■□□□□ 0.65
Shank3Q4ACU6 Rbpms2-202ENSMUST00000169003 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.64
Shank3Q4ACU6 Asic1-205ENSMUST00000228185 1818 ntBASIC19.08■□□□□ 0.64
Shank3Q4ACU6 Gjb3-202ENSMUST00000106091 1623 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Shank3Q4ACU6 Hap1-201ENSMUST00000103124 2120 ntAPPRIS P3 TSL 1 (best) BASIC19.08■□□□□ 0.64
Shank3Q4ACU6 Gm16867-201ENSMUST00000179116 3084 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Shank3Q4ACU6 Kcnq2-204ENSMUST00000103047 2899 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
Shank3Q4ACU6 Gm16194-204ENSMUST00000141797 475 ntTSL 3 BASIC19.08■□□□□ 0.64
Shank3Q4ACU6 Ramp3-201ENSMUST00000045374 1233 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Shank3Q4ACU6 Myl3-201ENSMUST00000079784 937 ntAPPRIS P2 TSL 1 (best) BASIC19.08■□□□□ 0.64
Shank3Q4ACU6 Ppp2r5d-201ENSMUST00000002839 2926 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Shank3Q4ACU6 Dlk2-203ENSMUST00000166617 1528 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Shank3Q4ACU6 Elovl1-207ENSMUST00000167636 1340 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Shank3Q4ACU6 Spryd4-201ENSMUST00000061995 1583 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Shank3Q4ACU6 Gm26891-201ENSMUST00000181644 2599 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Shank3Q4ACU6 Glrx2-210ENSMUST00000185362 3337 ntAPPRIS P4 TSL 1 (best) BASIC19.07■□□□□ 0.64
Shank3Q4ACU6 Tcea1-202ENSMUST00000165720 2854 ntTSL 5 BASIC19.07■□□□□ 0.64
Shank3Q4ACU6 Kl-201ENSMUST00000078856 5118 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Shank3Q4ACU6 Ift27-201ENSMUST00000016781 1012 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Shank3Q4ACU6 Aif1-201ENSMUST00000025257 847 ntAPPRIS P1 TSL 2 BASIC19.07■□□□□ 0.64
Shank3Q4ACU6 Cyp2t4-201ENSMUST00000108385 1599 ntAPPRIS ALT2 TSL 5 BASIC19.07■□□□□ 0.64
Shank3Q4ACU6 Fhl1-203ENSMUST00000114769 2770 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Shank3Q4ACU6 Kcnb1-201ENSMUST00000059826 4015 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Shank3Q4ACU6 Aurkc-204ENSMUST00000208049 1401 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
Shank3Q4ACU6 Sos2-201ENSMUST00000035773 5607 ntAPPRIS P2 TSL 5 BASIC19.07■□□□□ 0.64
Shank3Q4ACU6 Ehmt2-201ENSMUST00000013931 4026 ntAPPRIS P4 TSL 1 (best) BASIC19.07■□□□□ 0.64
Shank3Q4ACU6 A4galt-202ENSMUST00000164614 2128 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Shank3Q4ACU6 Nap1l1-208ENSMUST00000219961 1512 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Shank3Q4ACU6 Ldha-202ENSMUST00000048209 1588 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Shank3Q4ACU6 Rnd1-203ENSMUST00000120997 856 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Shank3Q4ACU6 Dupd1-202ENSMUST00000224735 548 ntBASIC19.06■□□□□ 0.64
Shank3Q4ACU6 AC132467.2-202ENSMUST00000227726 559 ntBASIC19.06■□□□□ 0.64
Shank3Q4ACU6 Cd302-201ENSMUST00000028356 1257 ntAPPRIS P3 TSL 1 (best) BASIC19.06■□□□□ 0.64
Shank3Q4ACU6 Selenov-201ENSMUST00000056589 1267 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Shank3Q4ACU6 Clec4g-202ENSMUST00000062037 1242 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Shank3Q4ACU6 Nt5c3b-201ENSMUST00000092688 1399 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Shank3Q4ACU6 Gm3045-201ENSMUST00000212844 1825 ntAPPRIS P1 TSL 5 BASIC19.06■□□□□ 0.64
Shank3Q4ACU6 Tmem8-201ENSMUST00000025010 3464 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Shank3Q4ACU6 Cnih3-201ENSMUST00000027795 2668 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Shank3Q4ACU6 Slc7a15-204ENSMUST00000165657 1467 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Shank3Q4ACU6 Slc7a15-202ENSMUST00000095863 1467 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Shank3Q4ACU6 Slc25a19-201ENSMUST00000021089 2307 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Shank3Q4ACU6 Nkx2-1-201ENSMUST00000001536 2809 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Shank3Q4ACU6 Zfand5-201ENSMUST00000025659 2834 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Shank3Q4ACU6 Ankrd23-201ENSMUST00000054665 1964 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Shank3Q4ACU6 Sgpp1-201ENSMUST00000021450 3323 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Shank3Q4ACU6 Igsf11-201ENSMUST00000023478 3443 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Shank3Q4ACU6 Phtf1-201ENSMUST00000055425 3060 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Shank3Q4ACU6 Ctnnbip1-202ENSMUST00000105692 634 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Shank3Q4ACU6 Gm12859-201ENSMUST00000117834 427 ntBASIC19.05■□□□□ 0.64
Shank3Q4ACU6 Gm4875-201ENSMUST00000118257 786 ntBASIC19.05■□□□□ 0.64
Shank3Q4ACU6 Gm12454-201ENSMUST00000139119 978 ntTSL 2 BASIC19.05■□□□□ 0.64
Shank3Q4ACU6 Mtmr2-209ENSMUST00000156801 617 ntTSL 5 BASIC19.05■□□□□ 0.64
Shank3Q4ACU6 Smim22-206ENSMUST00000184256 381 ntTSL 3 BASIC19.05■□□□□ 0.64
Shank3Q4ACU6 Ifi27-202ENSMUST00000076702 828 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
Shank3Q4ACU6 Foxi1-201ENSMUST00000060271 2357 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Shank3Q4ACU6 Gm42466-201ENSMUST00000202099 1301 ntBASIC19.05■□□□□ 0.64
Retrieved 100 of 76,532 protein–RNA pairs in 35.1 ms