Protein–RNA interactions for Protein: Q3UV31

Rnf223, RING finger protein 223, mousemouse

Predictions only

Length 285 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf223Q3UV31 Mras-202ENSMUST00000119472 1190 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Rnf223Q3UV31 Mir8117-201ENSMUST00000184773 107 ntBASIC15.04■□□□□ -0
Rnf223Q3UV31 Gm2213-201ENSMUST00000197485 688 ntBASIC15.04■□□□□ -0
Rnf223Q3UV31 Smim4-204ENSMUST00000203261 1219 ntTSL 1 (best) BASIC15.04■□□□□ -0
Rnf223Q3UV31 Plpp2-205ENSMUST00000218241 825 ntAPPRIS ALT2 TSL 3 BASIC15.04■□□□□ -0
Rnf223Q3UV31 Nek4-204ENSMUST00000226833 1252 ntAPPRIS ALT2 BASIC15.04■□□□□ -0
Rnf223Q3UV31 Rffl-202ENSMUST00000071152 3633 ntTSL 1 (best) BASIC15.04■□□□□ -0
Rnf223Q3UV31 Arntl2-204ENSMUST00000111639 2923 ntAPPRIS P3 TSL 5 BASIC15.04■□□□□ -0
Rnf223Q3UV31 Dzip3-202ENSMUST00000121869 5820 ntAPPRIS ALT2 TSL 5 BASIC15.04■□□□□ -0
Rnf223Q3UV31 Gtdc1-202ENSMUST00000100127 2422 ntTSL 1 (best) BASIC15.04■□□□□ -0
Rnf223Q3UV31 Rft1-201ENSMUST00000064230 2387 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Rnf223Q3UV31 Dbx1-201ENSMUST00000032717 2091 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Rnf223Q3UV31 Usp27x-201ENSMUST00000115744 3240 ntAPPRIS P1 BASIC15.04■□□□□ -0
Rnf223Q3UV31 Dhcr24-201ENSMUST00000047973 4028 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Rnf223Q3UV31 Mxd4-201ENSMUST00000042701 3872 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Rnf223Q3UV31 Sirt4-202ENSMUST00000112067 1645 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Rnf223Q3UV31 Snai1-201ENSMUST00000052631 1621 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Rnf223Q3UV31 Cyp2d10-201ENSMUST00000072776 1647 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Rnf223Q3UV31 Phf21b-203ENSMUST00000159939 3639 ntAPPRIS P2 TSL 1 (best) BASIC15.03■□□□□ -0
Rnf223Q3UV31 Lmna-202ENSMUST00000036252 1536 ntTSL 1 (best) BASIC15.03■□□□□ -0
Rnf223Q3UV31 Ddx50-201ENSMUST00000020270 2535 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Rnf223Q3UV31 Klrg1-201ENSMUST00000032207 1414 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Rnf223Q3UV31 Ntng1-203ENSMUST00000106570 1386 ntTSL 5 BASIC15.03■□□□□ -0
Rnf223Q3UV31 Gm13294-201ENSMUST00000121757 1330 ntBASIC15.03■□□□□ -0
Rnf223Q3UV31 AC119177.1-201ENSMUST00000227647 1332 ntBASIC15.03■□□□□ -0
Rnf223Q3UV31 Ank1-209ENSMUST00000121802 8218 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
Rnf223Q3UV31 Gemin7-204ENSMUST00000122055 609 ntAPPRIS P1 TSL 3 BASIC15.03■□□□□ -0
Rnf223Q3UV31 Gm25911-201ENSMUST00000157621 56 ntBASIC15.03■□□□□ -0
Rnf223Q3UV31 Gm26768-201ENSMUST00000181097 966 ntTSL 5 BASIC15.03■□□□□ -0
Rnf223Q3UV31 Ndufaf8-202ENSMUST00000185558 427 ntTSL 5 BASIC15.03■□□□□ -0
Rnf223Q3UV31 A430093F15Rik-205ENSMUST00000188480 509 ntTSL 3 BASIC15.03■□□□□ -0
Rnf223Q3UV31 Tspan18-201ENSMUST00000028646 1203 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Rnf223Q3UV31 1700034J05Rik-202ENSMUST00000111622 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
Rnf223Q3UV31 Mapk14-204ENSMUST00000114754 3592 ntTSL 1 (best) BASIC15.03■□□□□ -0
Rnf223Q3UV31 Synpo-201ENSMUST00000097566 5060 ntAPPRIS P3 TSL 1 (best) BASIC15.03■□□□□ -0
Rnf223Q3UV31 Dusp4-201ENSMUST00000033930 2740 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Rnf223Q3UV31 Foxq1-201ENSMUST00000042118 4843 ntAPPRIS P1 BASIC15.03■□□□□ -0
Rnf223Q3UV31 4933415F23Rik-201ENSMUST00000073179 1781 ntAPPRIS P1 BASIC15.03■□□□□ -0
Rnf223Q3UV31 Acbd5-206ENSMUST00000155602 1714 ntAPPRIS ALT2 TSL 2 BASIC15.03■□□□□ -0
Rnf223Q3UV31 Mael-202ENSMUST00000194057 1691 ntTSL 5 BASIC15.03■□□□□ -0
Rnf223Q3UV31 Gbe1-203ENSMUST00000163832 2984 ntAPPRIS P5 TSL 5 BASIC15.03■□□□□ -0
Rnf223Q3UV31 Fam69c-201ENSMUST00000052501 2153 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Rnf223Q3UV31 Jmy-201ENSMUST00000065537 8776 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Rnf223Q3UV31 Mtcl1-202ENSMUST00000097291 7274 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02■□□□□ -0
Rnf223Q3UV31 Lca5l-202ENSMUST00000113804 3162 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02■□□□□ -0
Rnf223Q3UV31 1600020E01Rik-207ENSMUST00000204738 1997 ntTSL 5 BASIC15.02■□□□□ -0
Rnf223Q3UV31 Ptprn-201ENSMUST00000027404 3554 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Rnf223Q3UV31 Gadd45gip1-201ENSMUST00000036734 2494 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Rnf223Q3UV31 Map1s-201ENSMUST00000019405 3314 ntAPPRIS P2 TSL 1 (best) BASIC15.02■□□□□ -0
Rnf223Q3UV31 Emp3-202ENSMUST00000164119 784 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Rnf223Q3UV31 Grtp1-201ENSMUST00000165605 1271 ntTSL 1 (best) BASIC15.02■□□□□ -0
Rnf223Q3UV31 Tma7-203ENSMUST00000192801 386 ntTSL 3 BASIC15.02■□□□□ -0
Rnf223Q3UV31 Ly6d-201ENSMUST00000040404 744 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Rnf223Q3UV31 Prss48-201ENSMUST00000061343 949 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Rnf223Q3UV31 Cnbd2-201ENSMUST00000037096 2277 ntAPPRIS P2 TSL 1 (best) BASIC15.02□□□□□ -0.01
Rnf223Q3UV31 Fads3-201ENSMUST00000115995 3269 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Rnf223Q3UV31 Mex3a-201ENSMUST00000172699 5778 ntAPPRIS P1 TSL 2 BASIC15.02□□□□□ -0.01
Rnf223Q3UV31 Itsn1-203ENSMUST00000095909 6103 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
Rnf223Q3UV31 Acap3-201ENSMUST00000079031 4301 ntTSL 5 BASIC15.02□□□□□ -0.01
Rnf223Q3UV31 Gjb1-203ENSMUST00000119190 1585 ntAPPRIS P1 TSL 2 BASIC15.02□□□□□ -0.01
Rnf223Q3UV31 Rab17-204ENSMUST00000131428 1557 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Rnf223Q3UV31 Eif2ak3-201ENSMUST00000034093 4513 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Rnf223Q3UV31 Gm11696-201ENSMUST00000070956 2765 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
Rnf223Q3UV31 Eif4g3-202ENSMUST00000084214 6139 ntAPPRIS P2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Rnf223Q3UV31 AC157650.3-201ENSMUST00000225058 1476 ntBASIC15.01□□□□□ -0.01
Rnf223Q3UV31 B230217C12Rik-203ENSMUST00000164364 1859 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Rnf223Q3UV31 Casp2-201ENSMUST00000031895 3529 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Rnf223Q3UV31 Mis12-206ENSMUST00000164220 1416 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Rnf223Q3UV31 B4galt2-203ENSMUST00000106421 1801 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Rnf223Q3UV31 Gfm2-211ENSMUST00000161913 1829 ntTSL 2 BASIC15.01□□□□□ -0.01
Rnf223Q3UV31 Ttc39b-202ENSMUST00000048274 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Rnf223Q3UV31 Osbpl1a-206ENSMUST00000121774 2931 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Rnf223Q3UV31 Gm17018-201ENSMUST00000047057 1345 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Rnf223Q3UV31 P3h1-201ENSMUST00000030393 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Rnf223Q3UV31 Zfp281-201ENSMUST00000047734 4933 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Rnf223Q3UV31 Rpl13-ps5-201ENSMUST00000117813 630 ntBASIC15.01□□□□□ -0.01
Rnf223Q3UV31 Gm13375-201ENSMUST00000126967 854 ntTSL 2 BASIC15.01□□□□□ -0.01
Rnf223Q3UV31 Pcp2-204ENSMUST00000136105 504 ntAPPRIS P4 TSL 1 (best) BASIC15.01□□□□□ -0.01
Rnf223Q3UV31 Dpf3-205ENSMUST00000177801 1092 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Rnf223Q3UV31 1500015A07Rik-203ENSMUST00000184678 890 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Rnf223Q3UV31 Gm17968-201ENSMUST00000194902 784 ntBASIC15.01□□□□□ -0.01
Rnf223Q3UV31 Gm18246-201ENSMUST00000221023 728 ntBASIC15.01□□□□□ -0.01
Rnf223Q3UV31 AC159295.1-201ENSMUST00000225326 940 ntBASIC15.01□□□□□ -0.01
Rnf223Q3UV31 AC225888.1-201ENSMUST00000227184 728 ntBASIC15.01□□□□□ -0.01
Rnf223Q3UV31 Cidea-201ENSMUST00000025404 1164 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Rnf223Q3UV31 Pecr-202ENSMUST00000097698 932 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Rnf223Q3UV31 H2-K1-201ENSMUST00000025181 1605 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
Rnf223Q3UV31 Crem-234ENSMUST00000154470 1996 ntTSL 5 BASIC15.01□□□□□ -0.01
Rnf223Q3UV31 Eif5-201ENSMUST00000050993 1969 ntAPPRIS P2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Rnf223Q3UV31 Sphk1-201ENSMUST00000063396 2659 ntAPPRIS ALT2 TSL 2 BASIC15.01□□□□□ -0.01
Rnf223Q3UV31 Trim3-201ENSMUST00000057525 3016 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Rnf223Q3UV31 Pde8b-201ENSMUST00000022192 2517 ntAPPRIS ALT2 TSL 5 BASIC15.01□□□□□ -0.01
Rnf223Q3UV31 Dars-201ENSMUST00000027602 2175 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Rnf223Q3UV31 Xpo4-209ENSMUST00000174545 8680 ntAPPRIS P2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Rnf223Q3UV31 Rmi2-201ENSMUST00000037913 3742 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Rnf223Q3UV31 Haus3-201ENSMUST00000060049 2073 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Rnf223Q3UV31 Irf3-202ENSMUST00000107834 1429 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Rnf223Q3UV31 Rbfox2-204ENSMUST00000171751 3558 ntTSL 1 (best) BASIC15□□□□□ -0.01
Rnf223Q3UV31 Zfp384-207ENSMUST00000112427 3072 ntAPPRIS P2 TSL 5 BASIC15□□□□□ -0.01
Rnf223Q3UV31 Eda-202ENSMUST00000113775 5088 ntTSL 1 (best) BASIC15□□□□□ -0.01
Retrieved 100 of 76,532 protein–RNA pairs in 37.4 ms