Protein–RNA interactions for Protein: Q3UHA3

Spg11, Spatacsin, mousemouse

Predictions only

Length 2,430 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Spg11Q3UHA3 Dleu2-208ENSMUST00000182768 1442 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Spg11Q3UHA3 Prdm6-201ENSMUST00000091900 2601 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Spg11Q3UHA3 Nedd8-201ENSMUST00000010520 824 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Spg11Q3UHA3 Mansc4-202ENSMUST00000123367 542 ntAPPRIS ALT2 TSL 2 BASIC14.2□□□□□ -0.14
Spg11Q3UHA3 Ndufaf2-201ENSMUST00000163558 678 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Spg11Q3UHA3 Rad51d-202ENSMUST00000021033 1201 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Spg11Q3UHA3 CT030657.3-201ENSMUST00000222707 1200 ntBASIC14.2□□□□□ -0.14
Spg11Q3UHA3 Rrp36-201ENSMUST00000024766 1195 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Spg11Q3UHA3 Il17rb-202ENSMUST00000122205 2094 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
Spg11Q3UHA3 Zfp647-201ENSMUST00000048854 1608 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Spg11Q3UHA3 Zyx-205ENSMUST00000203401 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Spg11Q3UHA3 Eepd1-201ENSMUST00000040677 2723 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Spg11Q3UHA3 Mmd-201ENSMUST00000004050 2677 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Spg11Q3UHA3 Pgs1-203ENSMUST00000132676 2863 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Spg11Q3UHA3 Igsf11-201ENSMUST00000023478 3443 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Spg11Q3UHA3 Sync-201ENSMUST00000102599 2042 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Spg11Q3UHA3 Nfix-204ENSMUST00000109764 5476 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Spg11Q3UHA3 Gm12714-201ENSMUST00000143391 669 ntTSL 3 BASIC14.19□□□□□ -0.14
Spg11Q3UHA3 Sf3a2-204ENSMUST00000151928 781 ntTSL 5 BASIC14.19□□□□□ -0.14
Spg11Q3UHA3 Gm27731-201ENSMUST00000185192 107 ntBASIC14.19□□□□□ -0.14
Spg11Q3UHA3 Gm39318-201ENSMUST00000214606 1118 ntTSL 3 BASIC14.19□□□□□ -0.14
Spg11Q3UHA3 C330018A13Rik-201ENSMUST00000127792 1599 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Spg11Q3UHA3 Twf2-201ENSMUST00000024047 1596 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Spg11Q3UHA3 Bean1-204ENSMUST00000171018 3386 ntAPPRIS P4 TSL 1 (best) BASIC14.19□□□□□ -0.14
Spg11Q3UHA3 Id2-202ENSMUST00000221761 1969 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
Spg11Q3UHA3 Elac2-201ENSMUST00000071891 2771 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Spg11Q3UHA3 Cyb561-201ENSMUST00000019734 2741 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Spg11Q3UHA3 Ablim2-203ENSMUST00000114203 1333 ntTSL 5 BASIC14.19□□□□□ -0.14
Spg11Q3UHA3 Agfg1-204ENSMUST00000186302 2352 ntAPPRIS ALT1 TSL 5 BASIC14.19□□□□□ -0.14
Spg11Q3UHA3 Gm8096-201ENSMUST00000209921 1591 ntBASIC14.19□□□□□ -0.14
Spg11Q3UHA3 Creb3l1-201ENSMUST00000028663 2603 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Spg11Q3UHA3 Dvl3-204ENSMUST00000171774 2319 ntTSL 5 BASIC14.19□□□□□ -0.14
Spg11Q3UHA3 Hus1b-201ENSMUST00000102943 1187 ntAPPRIS P1 BASIC14.19□□□□□ -0.14
Spg11Q3UHA3 Spaca3-202ENSMUST00000103223 947 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Spg11Q3UHA3 Gm14660-201ENSMUST00000119809 575 ntBASIC14.19□□□□□ -0.14
Spg11Q3UHA3 BC051226-201ENSMUST00000172526 837 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Spg11Q3UHA3 Gm29154-230ENSMUST00000215044 1165 ntTSL 5 BASIC14.19□□□□□ -0.14
Spg11Q3UHA3 Trpt1-201ENSMUST00000088223 1142 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Spg11Q3UHA3 Cbfb-203ENSMUST00000109394 2487 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Spg11Q3UHA3 Bpifb3-202ENSMUST00000109760 1741 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
Spg11Q3UHA3 Myrip-201ENSMUST00000048121 4906 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Spg11Q3UHA3 Gm13589-201ENSMUST00000146404 1675 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Spg11Q3UHA3 Galnt9-201ENSMUST00000040001 2883 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Spg11Q3UHA3 Hnrnpa2b1-210ENSMUST00000204188 1518 ntTSL 5 BASIC14.18□□□□□ -0.14
Spg11Q3UHA3 Sppl3-201ENSMUST00000031530 3204 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Spg11Q3UHA3 Slc36a3os-201ENSMUST00000155883 520 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Spg11Q3UHA3 Pax5-213ENSMUST00000173821 996 ntTSL 5 BASIC14.18□□□□□ -0.14
Spg11Q3UHA3 Hspb9-201ENSMUST00000017976 652 ntAPPRIS ALT2 BASIC14.18□□□□□ -0.14
Spg11Q3UHA3 Mir6392-201ENSMUST00000184924 108 ntBASIC14.18□□□□□ -0.14
Spg11Q3UHA3 Gm18934-201ENSMUST00000216671 1044 ntBASIC14.18□□□□□ -0.14
Spg11Q3UHA3 Il31-201ENSMUST00000031389 806 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Spg11Q3UHA3 Polr2e-201ENSMUST00000004786 1148 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Spg11Q3UHA3 Olfr1209-201ENSMUST00000099809 933 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
Spg11Q3UHA3 Chn1-209ENSMUST00000166199 3876 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Spg11Q3UHA3 AC131104.1-201ENSMUST00000222118 1739 ntTSL 5 BASIC14.18□□□□□ -0.14
Spg11Q3UHA3 Dio3-202ENSMUST00000173014 2030 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
Spg11Q3UHA3 T-201ENSMUST00000074667 2046 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Spg11Q3UHA3 Stk19-ps1-201ENSMUST00000174597 517 ntBASIC14.17□□□□□ -0.14
Spg11Q3UHA3 Slc35d2-202ENSMUST00000220792 917 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Spg11Q3UHA3 Gp9-201ENSMUST00000032133 881 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Spg11Q3UHA3 Pabpn1l-201ENSMUST00000093059 1148 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Spg11Q3UHA3 Gm6471-201ENSMUST00000097935 805 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Spg11Q3UHA3 Parp6-201ENSMUST00000026267 2709 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
Spg11Q3UHA3 Nfya-206ENSMUST00000160319 1407 ntTSL 5 BASIC14.17□□□□□ -0.14
Spg11Q3UHA3 1700022A21Rik-202ENSMUST00000182910 1448 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Spg11Q3UHA3 4933417O13Rik-202ENSMUST00000208893 1571 ntTSL 5 BASIC14.17□□□□□ -0.14
Spg11Q3UHA3 Irx3-202ENSMUST00000175795 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Spg11Q3UHA3 Spg7-209ENSMUST00000149248 2896 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Spg11Q3UHA3 Fam241b-204ENSMUST00000125704 1769 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Spg11Q3UHA3 4933415F23Rik-201ENSMUST00000073179 1781 ntAPPRIS P1 BASIC14.17□□□□□ -0.14
Spg11Q3UHA3 Flg-208ENSMUST00000180308 1076 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Spg11Q3UHA3 Fam110a-204ENSMUST00000109865 1853 ntAPPRIS P1 TSL 2 BASIC14.17□□□□□ -0.14
Spg11Q3UHA3 Tpm2-201ENSMUST00000030184 2175 ntTSL 5 BASIC14.17□□□□□ -0.14
Spg11Q3UHA3 Tm7sf2-203ENSMUST00000159084 1351 ntTSL 5 BASIC14.17□□□□□ -0.14
Spg11Q3UHA3 Pick1-206ENSMUST00000166155 1699 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Spg11Q3UHA3 Mfsd13a-201ENSMUST00000086969 2278 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Spg11Q3UHA3 Lonp2-201ENSMUST00000034141 2860 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Spg11Q3UHA3 Hnrnpd-211ENSMUST00000172361 6811 ntAPPRIS P4 TSL 1 (best) BASIC14.17□□□□□ -0.14
Spg11Q3UHA3 Rab1a-203ENSMUST00000109602 2626 ntTSL 5 BASIC14.17□□□□□ -0.14
Spg11Q3UHA3 Clasp2-204ENSMUST00000213663 2727 ntTSL 5 BASIC14.16□□□□□ -0.14
Spg11Q3UHA3 Opn1sw-203ENSMUST00000147483 1426 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Spg11Q3UHA3 Mipol1-201ENSMUST00000123498 2117 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
Spg11Q3UHA3 Pax5-206ENSMUST00000134968 969 ntTSL 5 BASIC14.16□□□□□ -0.14
Spg11Q3UHA3 Gm6257-201ENSMUST00000163864 910 ntBASIC14.16□□□□□ -0.14
Spg11Q3UHA3 Gm7067-201ENSMUST00000207698 1249 ntBASIC14.16□□□□□ -0.14
Spg11Q3UHA3 AC153845.2-201ENSMUST00000217535 673 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Spg11Q3UHA3 AC107711.5-202ENSMUST00000226429 702 ntBASIC14.16□□□□□ -0.14
Spg11Q3UHA3 Bst2-201ENSMUST00000051672 792 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Spg11Q3UHA3 Shank1-203ENSMUST00000107938 9826 ntAPPRIS P2 TSL 5 BASIC14.16□□□□□ -0.14
Spg11Q3UHA3 Rsph6a-201ENSMUST00000035521 2354 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Spg11Q3UHA3 Mettl7a3-201ENSMUST00000075420 1618 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Spg11Q3UHA3 Zfp42-202ENSMUST00000209356 1744 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Spg11Q3UHA3 Tmem176b-203ENSMUST00000166247 1414 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Spg11Q3UHA3 Coq8b-201ENSMUST00000003860 2181 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Spg11Q3UHA3 Slc2a9-207ENSMUST00000143758 1296 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Spg11Q3UHA3 Gm16026-204ENSMUST00000162652 683 ntBASIC14.16□□□□□ -0.14
Spg11Q3UHA3 Nudt17-202ENSMUST00000171249 1110 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Spg11Q3UHA3 Gm26618-201ENSMUST00000181123 497 ntTSL 2 BASIC14.16□□□□□ -0.14
Spg11Q3UHA3 Nkx2-2os-202ENSMUST00000184407 458 ntBASIC14.16□□□□□ -0.14
Spg11Q3UHA3 Prok2-204ENSMUST00000203738 695 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 26.8 ms