Protein–RNA interactions for Protein: Q3U962

Col5a2, Collagen alpha-2(V) chain, mousemouse

Predictions only

Length 1,497 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col5a2Q3U962 Gm28265-201ENSMUST00000188201 2319 ntBASIC18.26■□□□□ 0.51
Col5a2Q3U962 Afg1l-201ENSMUST00000041024 2513 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Col5a2Q3U962 Plekhg3-207ENSMUST00000219063 4535 ntAPPRIS ALT2 TSL 5 BASIC18.26■□□□□ 0.51
Col5a2Q3U962 Ptp4a2-201ENSMUST00000030578 3646 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
Col5a2Q3U962 Col9a3-203ENSMUST00000132527 3046 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
Col5a2Q3U962 Ighv5-17-201ENSMUST00000103459 405 ntAPPRIS P1 BASIC18.26■□□□□ 0.51
Col5a2Q3U962 Etfrf1-206ENSMUST00000111725 872 ntAPPRIS P1 TSL 2 BASIC18.26■□□□□ 0.51
Col5a2Q3U962 Rpl39-201ENSMUST00000115231 612 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Col5a2Q3U962 Cystm1-205ENSMUST00000152804 445 ntAPPRIS P2 TSL 3 BASIC18.26■□□□□ 0.51
Col5a2Q3U962 Hspa8-201ENSMUST00000015800 2394 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Col5a2Q3U962 Ttc9-202ENSMUST00000218362 4754 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Col5a2Q3U962 Dhodh-201ENSMUST00000123605 2039 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Col5a2Q3U962 Zfp622-201ENSMUST00000061875 2802 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Col5a2Q3U962 Gm16845-201ENSMUST00000180419 1415 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Col5a2Q3U962 Dnase1l2-201ENSMUST00000088506 1921 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Col5a2Q3U962 Taf5l-201ENSMUST00000093039 2912 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Col5a2Q3U962 Cul1-201ENSMUST00000031697 3161 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Col5a2Q3U962 Zmynd19-201ENSMUST00000028350 3903 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Col5a2Q3U962 Sirt6-201ENSMUST00000042923 1891 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
Col5a2Q3U962 Glrx2-210ENSMUST00000185362 3337 ntAPPRIS P4 TSL 1 (best) BASIC18.25■□□□□ 0.51
Col5a2Q3U962 Asb2-204ENSMUST00000149431 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Col5a2Q3U962 Hps6-201ENSMUST00000099393 2696 ntAPPRIS P1 BASIC18.25■□□□□ 0.51
Col5a2Q3U962 Gm11555-202ENSMUST00000104929 638 ntAPPRIS P1 BASIC18.25■□□□□ 0.51
Col5a2Q3U962 Gm15222-201ENSMUST00000127359 344 ntTSL 3 BASIC18.25■□□□□ 0.51
Col5a2Q3U962 Gm26839-201ENSMUST00000180686 842 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Col5a2Q3U962 Asb1-205ENSMUST00000188081 1272 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Col5a2Q3U962 Asb1-206ENSMUST00000188879 1299 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Col5a2Q3U962 AC154239.3-201ENSMUST00000226933 674 ntBASIC18.25■□□□□ 0.51
Col5a2Q3U962 Nup37-201ENSMUST00000052355 1267 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Col5a2Q3U962 Clec4g-202ENSMUST00000062037 1242 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Col5a2Q3U962 Zswim7-201ENSMUST00000072916 732 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Col5a2Q3U962 Map7-201ENSMUST00000020173 4252 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
Col5a2Q3U962 Krt74-201ENSMUST00000088018 1648 ntAPPRIS P1 TSL 2 BASIC18.24■□□□□ 0.51
Col5a2Q3U962 Cspg5-202ENSMUST00000196060 3790 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Col5a2Q3U962 Gm16867-201ENSMUST00000179116 3084 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Col5a2Q3U962 Arfgap1-214ENSMUST00000185115 1393 ntAPPRIS ALT2 TSL 5 BASIC18.24■□□□□ 0.51
Col5a2Q3U962 Fam241b-204ENSMUST00000125704 1769 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Col5a2Q3U962 Rd3-203ENSMUST00000181512 1760 ntTSL 5 BASIC18.24■□□□□ 0.51
Col5a2Q3U962 Gm15163-201ENSMUST00000120749 1302 ntBASIC18.24■□□□□ 0.51
Col5a2Q3U962 Elovl1-207ENSMUST00000167636 1340 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Col5a2Q3U962 Lmcd1-201ENSMUST00000032376 1730 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Col5a2Q3U962 Cldn14-204ENSMUST00000169391 1456 ntAPPRIS P1 TSL 2 BASIC18.24■□□□□ 0.51
Col5a2Q3U962 Plppr2-202ENSMUST00000188468 1480 ntAPPRIS ALT2 TSL 5 BASIC18.24■□□□□ 0.51
Col5a2Q3U962 Ctnnbip1-202ENSMUST00000105692 634 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Col5a2Q3U962 Rnd1-202ENSMUST00000109149 1034 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Col5a2Q3U962 Akirin1-ps-201ENSMUST00000119676 458 ntBASIC18.24■□□□□ 0.51
Col5a2Q3U962 Mettl26-204ENSMUST00000169085 324 ntTSL 5 BASIC18.24■□□□□ 0.51
Col5a2Q3U962 Gm27920-201ENSMUST00000183953 96 ntBASIC18.24■□□□□ 0.51
Col5a2Q3U962 Phgr1-201ENSMUST00000061360 538 ntAPPRIS ALT2 TSL 5 BASIC18.24■□□□□ 0.51
Col5a2Q3U962 Gab1-202ENSMUST00000210676 4985 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Col5a2Q3U962 Bean1-204ENSMUST00000171018 3386 ntAPPRIS P4 TSL 1 (best) BASIC18.24■□□□□ 0.51
Col5a2Q3U962 Tsnax-201ENSMUST00000075896 2391 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Col5a2Q3U962 Sept11-205ENSMUST00000201700 3478 ntAPPRIS ALT1 TSL 2 BASIC18.24■□□□□ 0.51
Col5a2Q3U962 Abhd16b-201ENSMUST00000069649 1775 ntAPPRIS P1 BASIC18.24■□□□□ 0.51
Col5a2Q3U962 Rab6a-201ENSMUST00000032946 3214 ntAPPRIS P3 TSL 1 (best) BASIC18.24■□□□□ 0.51
Col5a2Q3U962 Bicdl1-201ENSMUST00000055408 3026 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Col5a2Q3U962 Otub1-201ENSMUST00000025679 1713 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Col5a2Q3U962 A230103J11Rik-202ENSMUST00000156084 2086 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Col5a2Q3U962 Gm8334-201ENSMUST00000112755 1662 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
Col5a2Q3U962 Rnf25-201ENSMUST00000027357 1479 ntAPPRIS P3 TSL 1 (best) BASIC18.23■□□□□ 0.51
Col5a2Q3U962 Map2k5-201ENSMUST00000034920 2310 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Col5a2Q3U962 Crem-234ENSMUST00000154470 1996 ntTSL 5 BASIC18.23■□□□□ 0.51
Col5a2Q3U962 Gm7669-201ENSMUST00000210184 1603 ntBASIC18.23■□□□□ 0.51
Col5a2Q3U962 Pde4d-208ENSMUST00000120671 2455 ntTSL 5 BASIC18.23■□□□□ 0.51
Col5a2Q3U962 Ccdc69-202ENSMUST00000108880 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Col5a2Q3U962 Gm12859-201ENSMUST00000117834 427 ntBASIC18.23■□□□□ 0.51
Col5a2Q3U962 Gm16194-204ENSMUST00000141797 475 ntTSL 3 BASIC18.23■□□□□ 0.51
Col5a2Q3U962 Pim2-204ENSMUST00000223553 1113 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Col5a2Q3U962 Rps6ka1-202ENSMUST00000105894 3135 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Col5a2Q3U962 Rmnd5b-201ENSMUST00000001081 1946 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Col5a2Q3U962 Ate1-203ENSMUST00000094017 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Col5a2Q3U962 Gm13337-201ENSMUST00000119183 1594 ntBASIC18.23■□□□□ 0.51
Col5a2Q3U962 Gm8096-201ENSMUST00000209921 1591 ntBASIC18.23■□□□□ 0.51
Col5a2Q3U962 Rint1-205ENSMUST00000120869 1886 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Col5a2Q3U962 Rala-201ENSMUST00000009003 2688 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Col5a2Q3U962 Nt5c3b-201ENSMUST00000092688 1399 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Col5a2Q3U962 Asap2-203ENSMUST00000090834 5097 ntTSL 5 BASIC18.23■□□□□ 0.51
Col5a2Q3U962 Adam22-201ENSMUST00000046838 2773 ntAPPRIS P3 TSL 1 (best) BASIC18.23■□□□□ 0.51
Col5a2Q3U962 Smad1-202ENSMUST00000066091 3099 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Col5a2Q3U962 Trim39-203ENSMUST00000113706 3204 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Col5a2Q3U962 Gtdc1-202ENSMUST00000100127 2422 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Col5a2Q3U962 Tead3-206ENSMUST00000156862 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Col5a2Q3U962 Gm38327-201ENSMUST00000195852 1755 ntBASIC18.22■□□□□ 0.51
Col5a2Q3U962 Lrrc42-201ENSMUST00000030360 1755 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Col5a2Q3U962 Magi2-202ENSMUST00000101558 6530 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Col5a2Q3U962 Gm14928-201ENSMUST00000120198 477 ntBASIC18.22■□□□□ 0.51
Col5a2Q3U962 E130218I03Rik-203ENSMUST00000125921 666 ntAPPRIS P1 TSL 2 BASIC18.22■□□□□ 0.51
Col5a2Q3U962 Mcfd2-202ENSMUST00000129616 813 ntAPPRIS P1 TSL 3 BASIC18.22■□□□□ 0.51
Col5a2Q3U962 E130218I03Rik-206ENSMUST00000135228 544 ntAPPRIS P1 TSL 3 BASIC18.22■□□□□ 0.51
Col5a2Q3U962 E130218I03Rik-207ENSMUST00000143448 591 ntAPPRIS P1 TSL 3 BASIC18.22■□□□□ 0.51
Col5a2Q3U962 Gstt4-202ENSMUST00000160211 964 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Col5a2Q3U962 Gm28631-201ENSMUST00000190740 334 ntBASIC18.22■□□□□ 0.51
Col5a2Q3U962 Capn10-201ENSMUST00000027488 2902 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Col5a2Q3U962 Gpbar1-201ENSMUST00000077985 1075 ntAPPRIS P1 BASIC18.22■□□□□ 0.51
Col5a2Q3U962 Scrt1-202ENSMUST00000164703 3478 ntAPPRIS P1 TSL 2 BASIC18.22■□□□□ 0.51
Col5a2Q3U962 Kcnq2-204ENSMUST00000103047 2899 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Col5a2Q3U962 Actr8-201ENSMUST00000016115 2119 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Col5a2Q3U962 Nfe2l1-202ENSMUST00000107657 3869 ntAPPRIS P3 TSL 5 BASIC18.22■□□□□ 0.51
Col5a2Q3U962 Stra8-201ENSMUST00000031876 1803 ntAPPRIS P2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Col5a2Q3U962 Mycs-201ENSMUST00000058404 2368 ntAPPRIS P1 BASIC18.22■□□□□ 0.51
Retrieved 100 of 76,532 protein–RNA pairs in 53.3 ms