Protein–RNA interactions for Protein: Q3TR08

Fndc4, Fibronectin type III domain-containing protein 4, mousemouse

Predictions only

Length 231 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Fndc4Q3TR08 Slc25a22-201ENSMUST00000019226 2811 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Fndc4Q3TR08 Baz1b-201ENSMUST00000002825 6492 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Fndc4Q3TR08 Wdtc1-202ENSMUST00000105906 4057 ntTSL 5 BASIC13.29□□□□□ -0.28
Fndc4Q3TR08 Sik1-201ENSMUST00000024839 4511 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Fndc4Q3TR08 Gm13524-201ENSMUST00000125869 662 ntTSL 3 BASIC13.29□□□□□ -0.28
Fndc4Q3TR08 Gfod2-203ENSMUST00000155038 951 ntTSL 2 BASIC13.29□□□□□ -0.28
Fndc4Q3TR08 Fbxo9-203ENSMUST00000159099 1201 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Fndc4Q3TR08 Gm6659-201ENSMUST00000174752 547 ntBASIC13.29□□□□□ -0.28
Fndc4Q3TR08 4930505N22Rik-201ENSMUST00000181820 945 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Fndc4Q3TR08 Ankrd39-202ENSMUST00000194894 664 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Fndc4Q3TR08 Nudt21-204ENSMUST00000212981 1184 ntTSL 3 BASIC13.29□□□□□ -0.28
Fndc4Q3TR08 Mrpl36-203ENSMUST00000222030 680 ntAPPRIS P1 TSL 3 BASIC13.29□□□□□ -0.28
Fndc4Q3TR08 Abcc5-203ENSMUST00000096199 1136 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Fndc4Q3TR08 Rnf208-202ENSMUST00000114355 1333 ntAPPRIS P1 BASIC13.29□□□□□ -0.28
Fndc4Q3TR08 Tarsl2-201ENSMUST00000032728 3192 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Fndc4Q3TR08 Gm26793-201ENSMUST00000180930 2732 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Fndc4Q3TR08 Sctr-202ENSMUST00000189037 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Fndc4Q3TR08 Fgfr3-201ENSMUST00000067150 4218 ntAPPRIS P4 TSL 1 (best) BASIC13.29□□□□□ -0.28
Fndc4Q3TR08 Lmo4-202ENSMUST00000121112 1447 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Fndc4Q3TR08 Slc39a1-201ENSMUST00000015467 2364 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Fndc4Q3TR08 Pnma1-201ENSMUST00000061425 2359 ntAPPRIS P1 BASIC13.29□□□□□ -0.28
Fndc4Q3TR08 Hnf4a-201ENSMUST00000018094 4356 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Fndc4Q3TR08 Klhdc8b-207ENSMUST00000193286 2956 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Fndc4Q3TR08 Tbc1d8-201ENSMUST00000054462 4451 ntAPPRIS P2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Fndc4Q3TR08 Rusc2-207ENSMUST00000131668 5093 ntTSL 5 BASIC13.29□□□□□ -0.28
Fndc4Q3TR08 Cyp4f37-201ENSMUST00000077639 2642 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Fndc4Q3TR08 Eif4g1-206ENSMUST00000115463 5378 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Fndc4Q3TR08 Klhl26-202ENSMUST00000166976 2734 ntTSL 2 BASIC13.28□□□□□ -0.28
Fndc4Q3TR08 Gm14634-201ENSMUST00000139163 1662 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Fndc4Q3TR08 Dnm1-204ENSMUST00000113352 4605 ntAPPRIS ALT1 TSL 2 BASIC13.28□□□□□ -0.28
Fndc4Q3TR08 BC005537-201ENSMUST00000019276 5849 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Fndc4Q3TR08 Tmpo-202ENSMUST00000072239 3533 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Fndc4Q3TR08 E330011M16Rik-201ENSMUST00000193614 1794 ntBASIC13.28□□□□□ -0.28
Fndc4Q3TR08 Nat8f3-201ENSMUST00000050780 1821 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Fndc4Q3TR08 Gm16425-201ENSMUST00000118143 3130 ntBASIC13.28□□□□□ -0.28
Fndc4Q3TR08 N6amt1-201ENSMUST00000054442 1884 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Fndc4Q3TR08 Clcn2-201ENSMUST00000007207 3128 ntAPPRIS P2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Fndc4Q3TR08 Arhgef1-218ENSMUST00000206508 3195 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Fndc4Q3TR08 Gm38282-201ENSMUST00000192751 695 ntTSL 5 BASIC13.28□□□□□ -0.28
Fndc4Q3TR08 Ankrd40-201ENSMUST00000021227 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Fndc4Q3TR08 Hist1h2aj-201ENSMUST00000091710 352 ntBASIC13.28□□□□□ -0.28
Fndc4Q3TR08 Upf1-202ENSMUST00000215817 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Fndc4Q3TR08 Arhgef9-219ENSMUST00000199920 1976 ntAPPRIS ALT2 TSL 5 BASIC13.28□□□□□ -0.28
Fndc4Q3TR08 Igfbp2-201ENSMUST00000047328 1307 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Fndc4Q3TR08 Derl3-201ENSMUST00000009236 1321 ntAPPRIS P2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Fndc4Q3TR08 Cpne6-207ENSMUST00000171643 2016 ntAPPRIS P3 TSL 5 BASIC13.28□□□□□ -0.28
Fndc4Q3TR08 Mif4gd-201ENSMUST00000021087 1372 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Fndc4Q3TR08 Gpr88-201ENSMUST00000090473 3469 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Fndc4Q3TR08 Slk-202ENSMUST00000051691 4239 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
Fndc4Q3TR08 Crhr2-203ENSMUST00000114374 1440 ntAPPRIS ALT1 TSL 5 BASIC13.28□□□□□ -0.28
Fndc4Q3TR08 Prss54-201ENSMUST00000052690 1438 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Fndc4Q3TR08 Sec14l1-201ENSMUST00000021177 2866 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
Fndc4Q3TR08 Runx2-202ENSMUST00000113571 5898 ntAPPRIS P3 TSL 5 BASIC13.28□□□□□ -0.28
Fndc4Q3TR08 Klf15-204ENSMUST00000203607 2240 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Fndc4Q3TR08 Ccnj-202ENSMUST00000119316 3763 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
Fndc4Q3TR08 Nyap1-204ENSMUST00000212152 2499 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Fndc4Q3TR08 Sirt6-202ENSMUST00000119324 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Fndc4Q3TR08 Txnrd1-206ENSMUST00000219442 3531 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.28
Fndc4Q3TR08 Mcc-202ENSMUST00000164666 3606 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
Fndc4Q3TR08 Cdh11-201ENSMUST00000075190 5647 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Fndc4Q3TR08 Plpp7-201ENSMUST00000057423 1947 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Fndc4Q3TR08 Tfap2b-202ENSMUST00000064976 1946 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
Fndc4Q3TR08 Mus81-202ENSMUST00000124334 2067 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Fndc4Q3TR08 Kit-204ENSMUST00000144270 5241 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.28
Fndc4Q3TR08 Slc4a1ap-206ENSMUST00000201858 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.28
Fndc4Q3TR08 Smox-204ENSMUST00000110181 2299 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
Fndc4Q3TR08 Gm45546-201ENSMUST00000211053 2394 ntBASIC13.27□□□□□ -0.29
Fndc4Q3TR08 Thap12-201ENSMUST00000033009 3723 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Fndc4Q3TR08 Slc48a1-201ENSMUST00000117892 2536 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Fndc4Q3TR08 Spint2-202ENSMUST00000108236 1211 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Fndc4Q3TR08 Hnrnph3-203ENSMUST00000119814 682 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Fndc4Q3TR08 Smim1-205ENSMUST00000131325 842 ntTSL 5 BASIC13.27□□□□□ -0.29
Fndc4Q3TR08 Zfp629-206ENSMUST00000132524 215 ntTSL 5 BASIC13.27□□□□□ -0.29
Fndc4Q3TR08 Gm12359-202ENSMUST00000141696 713 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Fndc4Q3TR08 Gm12359-203ENSMUST00000153181 680 ntTSL 3 BASIC13.27□□□□□ -0.29
Fndc4Q3TR08 Gm19345-201ENSMUST00000172815 993 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Fndc4Q3TR08 Gm23634-201ENSMUST00000175071 91 ntBASIC13.27□□□□□ -0.29
Fndc4Q3TR08 Gm20033-201ENSMUST00000180470 572 ntTSL 3 BASIC13.27□□□□□ -0.29
Fndc4Q3TR08 Gm5587-201ENSMUST00000206270 674 ntBASIC13.27□□□□□ -0.29
Fndc4Q3TR08 Rpl18-204ENSMUST00000209693 535 ntTSL 5 BASIC13.27□□□□□ -0.29
Fndc4Q3TR08 Kiss1r-202ENSMUST00000219745 979 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Fndc4Q3TR08 Hint2-201ENSMUST00000030192 610 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Fndc4Q3TR08 Esr1-203ENSMUST00000105589 2612 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Fndc4Q3TR08 Pim1-201ENSMUST00000024811 2638 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Fndc4Q3TR08 Zpbp2-202ENSMUST00000081033 1300 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Fndc4Q3TR08 Tango6-202ENSMUST00000211979 2722 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Fndc4Q3TR08 Rpp25-201ENSMUST00000080514 1423 ntAPPRIS P1 BASIC13.27□□□□□ -0.29
Fndc4Q3TR08 Bnip2-203ENSMUST00000117450 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Fndc4Q3TR08 Cryl1-201ENSMUST00000022517 1497 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Fndc4Q3TR08 Tmem176a-201ENSMUST00000101426 1540 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Fndc4Q3TR08 Gm26752-201ENSMUST00000181086 1537 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Fndc4Q3TR08 Magi1-208ENSMUST00000204347 7929 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Fndc4Q3TR08 Kptn-201ENSMUST00000006178 1630 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Fndc4Q3TR08 Cacnb4-201ENSMUST00000078324 8225 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Fndc4Q3TR08 Cidec-202ENSMUST00000113089 1720 ntAPPRIS P2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Fndc4Q3TR08 Adamts14-201ENSMUST00000092486 5188 ntAPPRIS P2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Fndc4Q3TR08 Tpbg-202ENSMUST00000098500 3481 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Fndc4Q3TR08 Spns1-203ENSMUST00000119846 2017 ntTSL 5 BASIC13.27□□□□□ -0.29
Fndc4Q3TR08 Mrps2-201ENSMUST00000038600 2080 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Fndc4Q3TR08 Gm26702-201ENSMUST00000181730 4570 ntTSL 5 BASIC13.27□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 36.9 ms