Protein–RNA interactions for Protein: Q3TCX3

Khdc4, KH homology domain-containing protein 4, mousemouse

Predictions only

Length 612 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Khdc4Q3TCX3 Letm2-208ENSMUST00000210616 2974 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Khdc4Q3TCX3 Rnf139-201ENSMUST00000036904 4348 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Khdc4Q3TCX3 Txnrd2-215ENSMUST00000206151 2874 ntAPPRIS P2 TSL 5 BASIC14.78□□□□□ -0.04
Khdc4Q3TCX3 4933436I20Rik-201ENSMUST00000189405 1434 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Khdc4Q3TCX3 Gm37500-201ENSMUST00000192059 1443 ntBASIC14.78□□□□□ -0.04
Khdc4Q3TCX3 Malsu1-203ENSMUST00000128616 2819 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Khdc4Q3TCX3 Syk-203ENSMUST00000120135 5363 ntAPPRIS P2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Khdc4Q3TCX3 Aatk-202ENSMUST00000103019 5177 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
Khdc4Q3TCX3 Psmb1-201ENSMUST00000014913 1036 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Khdc4Q3TCX3 Gm8349-201ENSMUST00000182720 1003 ntBASIC14.78□□□□□ -0.04
Khdc4Q3TCX3 Calcb-203ENSMUST00000182816 706 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
Khdc4Q3TCX3 Gm6550-201ENSMUST00000187574 993 ntBASIC14.78□□□□□ -0.04
Khdc4Q3TCX3 Sox2ot-202ENSMUST00000196058 753 ntTSL 3 BASIC14.78□□□□□ -0.04
Khdc4Q3TCX3 D530014G21Rik-201ENSMUST00000208416 587 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Khdc4Q3TCX3 3830406C13Rik-207ENSMUST00000223927 1010 ntBASIC14.78□□□□□ -0.04
Khdc4Q3TCX3 Nek4-204ENSMUST00000226833 1252 ntAPPRIS ALT2 BASIC14.78□□□□□ -0.04
Khdc4Q3TCX3 Fam26f-201ENSMUST00000062784 1094 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Khdc4Q3TCX3 Acyp2-201ENSMUST00000074613 863 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Khdc4Q3TCX3 Sumo1-201ENSMUST00000091374 1215 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Khdc4Q3TCX3 Rgl3-201ENSMUST00000045726 2543 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Khdc4Q3TCX3 Tmem229b-206ENSMUST00000174697 3697 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
Khdc4Q3TCX3 Tbc1d1-203ENSMUST00000119756 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Khdc4Q3TCX3 Fam178b-202ENSMUST00000170295 2286 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
Khdc4Q3TCX3 Nkx1-2-201ENSMUST00000054562 3264 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Khdc4Q3TCX3 Nagpa-201ENSMUST00000023911 2143 ntAPPRIS P2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Khdc4Q3TCX3 Dnaja1-210ENSMUST00000164233 5622 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
Khdc4Q3TCX3 Irf7-202ENSMUST00000097952 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Khdc4Q3TCX3 Cyp11b2-201ENSMUST00000167634 1625 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Khdc4Q3TCX3 Gnb2-212ENSMUST00000150063 1569 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Khdc4Q3TCX3 Cd40-202ENSMUST00000073707 1596 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.04
Khdc4Q3TCX3 Ttc13-202ENSMUST00000117624 3096 ntTSL 5 BASIC14.77□□□□□ -0.04
Khdc4Q3TCX3 Nmur1-203ENSMUST00000212541 1534 ntTSL 5 BASIC14.77□□□□□ -0.04
Khdc4Q3TCX3 Smox-204ENSMUST00000110181 2299 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
Khdc4Q3TCX3 Fam81a-201ENSMUST00000034749 3703 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Khdc4Q3TCX3 Zpr1-206ENSMUST00000156440 2984 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Khdc4Q3TCX3 A230072C01Rik-202ENSMUST00000136447 1412 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
Khdc4Q3TCX3 Pcyt1a-202ENSMUST00000104893 4951 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.04
Khdc4Q3TCX3 Gm26718-201ENSMUST00000181048 1378 ntTSL 5 BASIC14.77□□□□□ -0.04
Khdc4Q3TCX3 Knop1-205ENSMUST00000116280 5382 ntAPPRIS P3 TSL 5 BASIC14.77□□□□□ -0.04
Khdc4Q3TCX3 Otp-201ENSMUST00000022195 2656 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Khdc4Q3TCX3 Cope-201ENSMUST00000066469 1300 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Khdc4Q3TCX3 Vstm5-201ENSMUST00000034413 1991 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Khdc4Q3TCX3 Atl1-201ENSMUST00000021466 5150 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Khdc4Q3TCX3 Tfap2b-202ENSMUST00000064976 1946 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
Khdc4Q3TCX3 Gm15467-201ENSMUST00000120582 445 ntBASIC14.77□□□□□ -0.05
Khdc4Q3TCX3 Ccnd3-208ENSMUST00000182539 931 ntTSL 2 BASIC14.77□□□□□ -0.05
Khdc4Q3TCX3 Pih1d1-206ENSMUST00000210139 1077 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Khdc4Q3TCX3 Gm9172-201ENSMUST00000212092 954 ntBASIC14.77□□□□□ -0.05
Khdc4Q3TCX3 AV026068-213ENSMUST00000223675 1171 ntBASIC14.77□□□□□ -0.05
Khdc4Q3TCX3 AC154222.1-201ENSMUST00000223882 475 ntBASIC14.77□□□□□ -0.05
Khdc4Q3TCX3 Rbpms-202ENSMUST00000033995 1039 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Khdc4Q3TCX3 BC031181-201ENSMUST00000040284 1047 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Khdc4Q3TCX3 Hist1h2ab-201ENSMUST00000078369 473 ntAPPRIS P1 BASIC14.77□□□□□ -0.05
Khdc4Q3TCX3 Apeh-206ENSMUST00000193254 2518 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Khdc4Q3TCX3 Mapk14-204ENSMUST00000114754 3592 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
Khdc4Q3TCX3 Kif17-204ENSMUST00000105821 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.05
Khdc4Q3TCX3 Sucla2-203ENSMUST00000160507 2229 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Khdc4Q3TCX3 Mid1-206ENSMUST00000112107 3194 ntTSL 5 BASIC14.77□□□□□ -0.05
Khdc4Q3TCX3 Celf1-206ENSMUST00000111451 4678 ntAPPRIS ALT1 TSL 5 BASIC14.77□□□□□ -0.05
Khdc4Q3TCX3 Ggnbp2-203ENSMUST00000108081 3034 ntAPPRIS P2 TSL 5 BASIC14.76□□□□□ -0.05
Khdc4Q3TCX3 Tor1b-201ENSMUST00000028199 3039 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Khdc4Q3TCX3 Zfand6-208ENSMUST00000209117 2955 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Khdc4Q3TCX3 Gm36447-201ENSMUST00000201101 1978 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Khdc4Q3TCX3 E330009J07Rik-202ENSMUST00000101492 6742 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Khdc4Q3TCX3 Adgrl1-210ENSMUST00000152978 5734 ntTSL 5 BASIC14.76□□□□□ -0.05
Khdc4Q3TCX3 Mir124-2hg-202ENSMUST00000186746 1368 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Khdc4Q3TCX3 4930524O07Rik-203ENSMUST00000193135 2289 ntBASIC14.76□□□□□ -0.05
Khdc4Q3TCX3 Macrod2-201ENSMUST00000043836 3552 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Khdc4Q3TCX3 Anks6-201ENSMUST00000084616 3552 ntAPPRIS P1 TSL 5 BASIC14.76□□□□□ -0.05
Khdc4Q3TCX3 Nanos1-201ENSMUST00000088237 3927 ntAPPRIS P1 BASIC14.76□□□□□ -0.05
Khdc4Q3TCX3 Tom1l2-201ENSMUST00000064019 2151 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Khdc4Q3TCX3 Nt5c-202ENSMUST00000106530 836 ntTSL 3 BASIC14.76□□□□□ -0.05
Khdc4Q3TCX3 Ptpa-208ENSMUST00000131476 989 ntTSL 2 BASIC14.76□□□□□ -0.05
Khdc4Q3TCX3 Gm11780-201ENSMUST00000136880 516 ntBASIC14.76□□□□□ -0.05
Khdc4Q3TCX3 Egfl8-201ENSMUST00000015611 1150 ntAPPRIS P2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Khdc4Q3TCX3 Tmem176a-202ENSMUST00000168406 1086 ntAPPRIS P1 TSL 3 BASIC14.76□□□□□ -0.05
Khdc4Q3TCX3 Banf1-202ENSMUST00000170010 742 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Khdc4Q3TCX3 4930445N18Rik-202ENSMUST00000181345 1033 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Khdc4Q3TCX3 Kcnh1-201ENSMUST00000078470 7242 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
Khdc4Q3TCX3 Egfl8-202ENSMUST00000097345 1064 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Khdc4Q3TCX3 Dnajb11-204ENSMUST00000166487 2534 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Khdc4Q3TCX3 1700001O22Rik-201ENSMUST00000050003 1672 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Khdc4Q3TCX3 1700034J05Rik-202ENSMUST00000111622 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Khdc4Q3TCX3 Snx2-201ENSMUST00000037850 2013 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Khdc4Q3TCX3 Prlhr-201ENSMUST00000051277 1572 ntAPPRIS P1 BASIC14.76□□□□□ -0.05
Khdc4Q3TCX3 Nrxn1-209ENSMUST00000161402 4953 ntTSL 5 BASIC14.76□□□□□ -0.05
Khdc4Q3TCX3 March4-201ENSMUST00000047786 4553 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Khdc4Q3TCX3 Ambra1-205ENSMUST00000111317 4929 ntTSL 5 BASIC14.76□□□□□ -0.05
Khdc4Q3TCX3 Agap1-204ENSMUST00000190096 4078 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Khdc4Q3TCX3 Kcnn1-201ENSMUST00000110078 4047 ntAPPRIS P2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Khdc4Q3TCX3 Kcnn1-202ENSMUST00000110081 4045 ntAPPRIS ALT2 TSL 5 BASIC14.76□□□□□ -0.05
Khdc4Q3TCX3 Wdr12-202ENSMUST00000117438 3251 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Khdc4Q3TCX3 Susd6-201ENSMUST00000068519 4977 ntAPPRIS P2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Khdc4Q3TCX3 Gm28111-201ENSMUST00000187786 1393 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Khdc4Q3TCX3 Naa35-201ENSMUST00000022038 3793 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Khdc4Q3TCX3 Tacc1-202ENSMUST00000084512 6471 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Khdc4Q3TCX3 Pcdha4-202ENSMUST00000192512 5363 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Khdc4Q3TCX3 Gm11127-201ENSMUST00000113742 1344 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Khdc4Q3TCX3 Lrrfip2-201ENSMUST00000035078 3260 ntTSL 5 BASIC14.75□□□□□ -0.05
Khdc4Q3TCX3 Commd6-201ENSMUST00000100339 1090 ntAPPRIS P3 TSL 1 (best) BASIC14.75□□□□□ -0.05
Retrieved 100 of 76,532 protein–RNA pairs in 26.9 ms