Protein–RNA interactions for Protein: Q3TCH7

Cul4a, Cullin-4A, mousemouse

Predictions only

Length 759 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cul4aQ3TCH7 Cnot11-203ENSMUST00000161515 3482 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Cul4aQ3TCH7 Pprc1-203ENSMUST00000111899 5246 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Cul4aQ3TCH7 Cadps2-204ENSMUST00000115356 3533 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Cul4aQ3TCH7 Pam-210ENSMUST00000161567 3630 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.2
Cul4aQ3TCH7 Sox13-205ENSMUST00000153799 3693 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Cul4aQ3TCH7 Rxrg-203ENSMUST00000111384 1967 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
Cul4aQ3TCH7 Ccdc71l-201ENSMUST00000172332 4240 ntAPPRIS P1 BASIC16.33■□□□□ 0.2
Cul4aQ3TCH7 Ttyh1-203ENSMUST00000119661 2512 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Cul4aQ3TCH7 Adamts17-202ENSMUST00000107478 6416 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
Cul4aQ3TCH7 Tmed9-201ENSMUST00000109905 1420 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Cul4aQ3TCH7 Tm6sf2-202ENSMUST00000110160 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Cul4aQ3TCH7 Arid4b-204ENSMUST00000110536 5783 ntTSL 5 BASIC16.32■□□□□ 0.2
Cul4aQ3TCH7 Cul4a-202ENSMUST00000121426 1044 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Cul4aQ3TCH7 Por-202ENSMUST00000122113 2606 ntTSL 2 BASIC16.32■□□□□ 0.2
Cul4aQ3TCH7 Olfr129-201ENSMUST00000122318 993 ntBASIC16.32■□□□□ 0.2
Cul4aQ3TCH7 Srrm1-208ENSMUST00000136342 3152 ntAPPRIS P3 TSL 5 BASIC16.32■□□□□ 0.2
Cul4aQ3TCH7 Rprl3-201ENSMUST00000157400 290 ntBASIC16.32■□□□□ 0.2
Cul4aQ3TCH7 Loxl4-203ENSMUST00000164786 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Cul4aQ3TCH7 Map2k3-201ENSMUST00000019076 2198 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Cul4aQ3TCH7 6030419C18Rik-202ENSMUST00000216294 1601 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Cul4aQ3TCH7 Sirt5-203ENSMUST00000220576 1579 ntTSL 5 BASIC16.32■□□□□ 0.2
Cul4aQ3TCH7 Vti1a-206ENSMUST00000225529 1244 ntBASIC16.32■□□□□ 0.2
Cul4aQ3TCH7 Pacs1-201ENSMUST00000025786 4339 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Cul4aQ3TCH7 Card9-201ENSMUST00000028294 1880 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
Cul4aQ3TCH7 Plk1-201ENSMUST00000033154 2199 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Cul4aQ3TCH7 Map3k7-201ENSMUST00000037607 5773 ntAPPRIS ALT1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Cul4aQ3TCH7 Poli-201ENSMUST00000043286 2591 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Cul4aQ3TCH7 Fam131c-201ENSMUST00000006380 1433 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Cul4aQ3TCH7 Rplp2-201ENSMUST00000084434 964 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Cul4aQ3TCH7 Nipal3-201ENSMUST00000102549 5153 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
Cul4aQ3TCH7 Snrk-201ENSMUST00000118886 4811 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Cul4aQ3TCH7 Kcnq4-201ENSMUST00000030376 3919 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
Cul4aQ3TCH7 Gm37728-201ENSMUST00000195025 2292 ntBASIC16.31■□□□□ 0.2
Cul4aQ3TCH7 Zmynd11-207ENSMUST00000110638 4003 ntTSL 5 BASIC16.31■□□□□ 0.2
Cul4aQ3TCH7 Card9-202ENSMUST00000100303 1947 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Cul4aQ3TCH7 Nat8f7-201ENSMUST00000160534 1822 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
Cul4aQ3TCH7 Oas1b-203ENSMUST00000183291 1837 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Cul4aQ3TCH7 Zswim4-201ENSMUST00000039480 4625 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Cul4aQ3TCH7 Gm43352-201ENSMUST00000196419 3065 ntBASIC16.31■□□□□ 0.2
Cul4aQ3TCH7 Sppl2b-201ENSMUST00000035597 2869 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Cul4aQ3TCH7 Zfp90-201ENSMUST00000034382 2632 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Cul4aQ3TCH7 Gm44454-201ENSMUST00000198541 138 ntBASIC16.31■□□□□ 0.2
Cul4aQ3TCH7 Pthlh-202ENSMUST00000204197 1281 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
Cul4aQ3TCH7 Hint1-201ENSMUST00000020504 636 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Cul4aQ3TCH7 Ube2d3-210ENSMUST00000197539 2515 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Cul4aQ3TCH7 Rtn1-202ENSMUST00000078505 3629 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Cul4aQ3TCH7 Ppef2-201ENSMUST00000031359 2274 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Cul4aQ3TCH7 Cdon-202ENSMUST00000119129 7503 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
Cul4aQ3TCH7 Sybu-207ENSMUST00000227305 3124 ntAPPRIS ALT2 BASIC16.31■□□□□ 0.2
Cul4aQ3TCH7 D630044L22Rik-201ENSMUST00000181174 2964 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Cul4aQ3TCH7 Lpgat1-201ENSMUST00000110855 7233 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Cul4aQ3TCH7 Zfp800-202ENSMUST00000115320 4311 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Cul4aQ3TCH7 Rapsn-201ENSMUST00000050323 1606 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Cul4aQ3TCH7 Clcn2-201ENSMUST00000007207 3128 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Cul4aQ3TCH7 Hdhd2-203ENSMUST00000097522 2318 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Cul4aQ3TCH7 Rtn1-201ENSMUST00000021497 1544 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Cul4aQ3TCH7 Megf11-210ENSMUST00000164113 6018 ntTSL 5 BASIC16.3■□□□□ 0.2
Cul4aQ3TCH7 Ubb-201ENSMUST00000019649 1499 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Cul4aQ3TCH7 Pcbp3-201ENSMUST00000001148 2013 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
Cul4aQ3TCH7 Commd7-202ENSMUST00000109782 1343 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Cul4aQ3TCH7 Kif7-201ENSMUST00000059836 4521 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
Cul4aQ3TCH7 Fam107b-203ENSMUST00000115053 688 ntAPPRIS P1 TSL 3 BASIC16.3■□□□□ 0.2
Cul4aQ3TCH7 Gm23634-201ENSMUST00000175071 91 ntBASIC16.3■□□□□ 0.2
Cul4aQ3TCH7 4930428E07Rik-201ENSMUST00000222132 920 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Cul4aQ3TCH7 AC159093.1-201ENSMUST00000227779 380 ntBASIC16.3■□□□□ 0.2
Cul4aQ3TCH7 Gfod1-201ENSMUST00000055341 6928 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Cul4aQ3TCH7 Gm16425-201ENSMUST00000118143 3130 ntBASIC16.3■□□□□ 0.2
Cul4aQ3TCH7 Gm10564-201ENSMUST00000097750 3113 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Cul4aQ3TCH7 Shmt2-201ENSMUST00000026470 2289 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Cul4aQ3TCH7 Eftud2-202ENSMUST00000107060 3339 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Cul4aQ3TCH7 Zfr2-201ENSMUST00000117798 3349 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
Cul4aQ3TCH7 Acbd5-203ENSMUST00000114526 3725 ntAPPRIS P4 TSL 1 (best) BASIC16.3■□□□□ 0.2
Cul4aQ3TCH7 Zfp13-201ENSMUST00000057029 2139 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Cul4aQ3TCH7 Agap1-202ENSMUST00000074945 10069 ntTSL 5 BASIC16.3■□□□□ 0.2
Cul4aQ3TCH7 Zfp703-202ENSMUST00000154256 3152 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Cul4aQ3TCH7 Tstd3-201ENSMUST00000029915 1588 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Cul4aQ3TCH7 Ren1-201ENSMUST00000094556 1592 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Cul4aQ3TCH7 Prr15-201ENSMUST00000059138 1511 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Cul4aQ3TCH7 Prnd-202ENSMUST00000110170 1969 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Cul4aQ3TCH7 Gm5357-201ENSMUST00000212720 1924 ntBASIC16.29■□□□□ 0.2
Cul4aQ3TCH7 Ttc16-202ENSMUST00000091059 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Cul4aQ3TCH7 Sh2b3-204ENSMUST00000122426 2777 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
Cul4aQ3TCH7 Arpc1b-211ENSMUST00000196111 1394 ntAPPRIS ALT1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Cul4aQ3TCH7 Slmap-203ENSMUST00000102956 5476 ntAPPRIS P3 TSL 5 BASIC16.29■□□□□ 0.2
Cul4aQ3TCH7 Dbndd2-201ENSMUST00000017878 1338 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
Cul4aQ3TCH7 Gm16181-201ENSMUST00000118793 567 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Cul4aQ3TCH7 Oaz2-204ENSMUST00000136166 700 ntTSL 5 BASIC16.29■□□□□ 0.2
Cul4aQ3TCH7 AC160980.1-201ENSMUST00000224136 970 ntBASIC16.29■□□□□ 0.2
Cul4aQ3TCH7 Il17a-201ENSMUST00000027061 1171 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Cul4aQ3TCH7 Gm9991-201ENSMUST00000070048 1207 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Cul4aQ3TCH7 Appbp2-201ENSMUST00000018625 6463 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Cul4aQ3TCH7 Tyro3-201ENSMUST00000028763 3989 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
Cul4aQ3TCH7 Rspo4-201ENSMUST00000042217 2371 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Cul4aQ3TCH7 9630013D21Rik-204ENSMUST00000156790 3096 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Cul4aQ3TCH7 Klc1-203ENSMUST00000120544 2261 ntAPPRIS ALT1 TSL 5 BASIC16.29■□□□□ 0.2
Cul4aQ3TCH7 Tead2-203ENSMUST00000107801 3396 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
Cul4aQ3TCH7 Tmem56-203ENSMUST00000128909 6696 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Cul4aQ3TCH7 Snx11-201ENSMUST00000021246 2551 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Cul4aQ3TCH7 Lhx3-202ENSMUST00000054099 2184 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Cul4aQ3TCH7 Anks1b-202ENSMUST00000099366 2549 ntTSL 5 BASIC16.28■□□□□ 0.2
Retrieved 100 of 76,532 protein–RNA pairs in 32.8 ms