Protein–RNA interactions for Protein: Q2QI47

Ush2A, Usherin, mousemouse

Predictions only

Length 5,193 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ush2AQ2QI47 Ddit3-201ENSMUST00000026475 890 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
Ush2AQ2QI47 Lim2-201ENSMUST00000004732 884 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
Ush2AQ2QI47 Gm8973-201ENSMUST00000079818 315 ntAPPRIS P1 BASIC8.16□□□□□ -1.1
Ush2AQ2QI47 Relb-201ENSMUST00000049912 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC8.15□□□□□ -1.1
Ush2AQ2QI47 Rab34-203ENSMUST00000108322 1685 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.1
Ush2AQ2QI47 Dynlt1c-201ENSMUST00000092966 2589 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.1
Ush2AQ2QI47 H2-K1-201ENSMUST00000025181 1605 ntAPPRIS P3 TSL 1 (best) BASIC8.15□□□□□ -1.1
Ush2AQ2QI47 Gm8775-201ENSMUST00000170943 1327 ntBASIC8.15□□□□□ -1.1
Ush2AQ2QI47 Rnaseh2a-210ENSMUST00000147812 1532 ntAPPRIS P1 TSL 5 BASIC8.15□□□□□ -1.1
Ush2AQ2QI47 Ccnh-204ENSMUST00000164127 1718 ntTSL 1 (best) BASIC8.15□□□□□ -1.1
Ush2AQ2QI47 Psme2b-201ENSMUST00000104958 837 ntAPPRIS P1 BASIC8.15□□□□□ -1.1
Ush2AQ2QI47 Crip3-202ENSMUST00000113465 1035 ntTSL 1 (best) BASIC8.15□□□□□ -1.1
Ush2AQ2QI47 E130218I03Rik-207ENSMUST00000143448 591 ntAPPRIS P1 TSL 3 BASIC8.15□□□□□ -1.1
Ush2AQ2QI47 Crb3-204ENSMUST00000163763 868 ntAPPRIS P3 TSL 2 BASIC8.15□□□□□ -1.1
Ush2AQ2QI47 Mocs2-203ENSMUST00000164737 745 ntTSL 3 BASIC8.15□□□□□ -1.1
Ush2AQ2QI47 AC154595.3-201ENSMUST00000224579 384 ntBASIC8.15□□□□□ -1.1
Ush2AQ2QI47 Agfg2-202ENSMUST00000100544 2858 ntAPPRIS ALT2 TSL 1 (best) BASIC8.15□□□□□ -1.1
Ush2AQ2QI47 Rbpms2-202ENSMUST00000169003 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC8.15□□□□□ -1.1
Ush2AQ2QI47 Hras-201ENSMUST00000026572 2828 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.1
Ush2AQ2QI47 Tmem88-201ENSMUST00000050140 1582 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.1
Ush2AQ2QI47 Dexi-203ENSMUST00000184863 2537 ntAPPRIS P1 TSL 2 BASIC8.15□□□□□ -1.1
Ush2AQ2QI47 Itgb1bp1-201ENSMUST00000076260 1874 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.1
Ush2AQ2QI47 Med18-201ENSMUST00000102567 1675 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.1
Ush2AQ2QI47 Mst1-204ENSMUST00000162886 2209 ntAPPRIS ALT2 TSL 5 BASIC8.15□□□□□ -1.1
Ush2AQ2QI47 AC164565.1-201ENSMUST00000217520 1484 ntBASIC8.15□□□□□ -1.1
Ush2AQ2QI47 Hoxb5os-202ENSMUST00000150698 596 ntTSL 1 (best) BASIC8.15□□□□□ -1.1
Ush2AQ2QI47 Gm14209-201ENSMUST00000154946 462 ntTSL 5 BASIC8.15□□□□□ -1.1
Ush2AQ2QI47 Gm38000-201ENSMUST00000192390 1215 ntBASIC8.15□□□□□ -1.1
Ush2AQ2QI47 Gm38804-201ENSMUST00000203998 767 ntTSL 3 BASIC8.15□□□□□ -1.1
Ush2AQ2QI47 Wdr83-201ENSMUST00000093357 1238 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.1
Ush2AQ2QI47 T-201ENSMUST00000074667 2046 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.1
Ush2AQ2QI47 Gm14066-201ENSMUST00000134801 2057 ntTSL 1 (best) BASIC8.15□□□□□ -1.11
Ush2AQ2QI47 Gm44632-201ENSMUST00000207245 474 ntTSL 2 BASIC8.15□□□□□ -1.11
Ush2AQ2QI47 Epn1-207ENSMUST00000208634 2127 ntAPPRIS ALT2 TSL 5 BASIC8.15□□□□□ -1.11
Ush2AQ2QI47 Ntrk1-201ENSMUST00000029712 2588 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.11
Ush2AQ2QI47 Lifr-202ENSMUST00000164529 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC8.15□□□□□ -1.11
Ush2AQ2QI47 Mir1894-201ENSMUST00000122802 81 ntBASIC8.15□□□□□ -1.11
Ush2AQ2QI47 C030017D09Rik-201ENSMUST00000163690 923 ntTSL 1 (best) BASIC8.15□□□□□ -1.11
Ush2AQ2QI47 Gm16505-201ENSMUST00000179981 232 ntBASIC8.15□□□□□ -1.11
Ush2AQ2QI47 Gm38002-201ENSMUST00000193255 180 ntBASIC8.15□□□□□ -1.11
Ush2AQ2QI47 Gm19184-201ENSMUST00000196798 928 ntBASIC8.15□□□□□ -1.11
Ush2AQ2QI47 Eef1d-203ENSMUST00000089680 973 ntTSL 1 (best) BASIC8.15□□□□□ -1.11
Ush2AQ2QI47 Casq1-201ENSMUST00000003554 1847 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.11
Ush2AQ2QI47 Gja3-201ENSMUST00000061614 2766 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
Ush2AQ2QI47 Cxxc1-201ENSMUST00000025444 2618 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
Ush2AQ2QI47 1700018L02Rik-201ENSMUST00000187897 2485 ntBASIC8.14□□□□□ -1.11
Ush2AQ2QI47 Ints10-203ENSMUST00000110241 2322 ntTSL 1 (best) BASIC8.14□□□□□ -1.11
Ush2AQ2QI47 Mfsd14a-201ENSMUST00000029570 2782 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
Ush2AQ2QI47 Rnf135-201ENSMUST00000017839 1984 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
Ush2AQ2QI47 Mex3d-201ENSMUST00000105350 3266 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
Ush2AQ2QI47 Mtmr7-202ENSMUST00000048898 2488 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
Ush2AQ2QI47 Park7-205ENSMUST00000105676 582 ntTSL 5 BASIC8.14□□□□□ -1.11
Ush2AQ2QI47 Gm40466-201ENSMUST00000212174 422 ntBASIC8.14□□□□□ -1.11
Ush2AQ2QI47 Olfr54-201ENSMUST00000072152 942 ntAPPRIS P1 BASIC8.14□□□□□ -1.11
Ush2AQ2QI47 Olfr1375-201ENSMUST00000073543 942 ntAPPRIS P1 BASIC8.14□□□□□ -1.11
Ush2AQ2QI47 Cyth2-202ENSMUST00000107729 2519 ntAPPRIS P2 TSL 1 (best) BASIC8.14□□□□□ -1.11
Ush2AQ2QI47 Ppp1r18-206ENSMUST00000190496 1395 ntTSL 1 (best) BASIC8.14□□□□□ -1.11
Ush2AQ2QI47 Adgrv1-207ENSMUST00000128585 2580 ntTSL 1 (best) BASIC8.14□□□□□ -1.11
Ush2AQ2QI47 Klf16-201ENSMUST00000038558 2674 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
Ush2AQ2QI47 P2rx3-203ENSMUST00000111616 1315 ntTSL 5 BASIC8.14□□□□□ -1.11
Ush2AQ2QI47 Sri-205ENSMUST00000148633 2251 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
Ush2AQ2QI47 Txn2-202ENSMUST00000100486 676 ntTSL 1 (best) BASIC8.14□□□□□ -1.11
Ush2AQ2QI47 9330198N18Rik-201ENSMUST00000146702 1247 ntTSL 1 (best) BASIC8.14□□□□□ -1.11
Ush2AQ2QI47 Abcd4-210ENSMUST00000223107 2410 ntTSL 1 (best) BASIC8.14□□□□□ -1.11
Ush2AQ2QI47 Sybu-203ENSMUST00000110269 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC8.14□□□□□ -1.11
Ush2AQ2QI47 Mark2-206ENSMUST00000164205 3104 ntAPPRIS ALT2 TSL 1 (best) BASIC8.14□□□□□ -1.11
Ush2AQ2QI47 Mrps27-201ENSMUST00000052249 1849 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
Ush2AQ2QI47 Gm12348-201ENSMUST00000138915 313 ntTSL 3 BASIC8.14□□□□□ -1.11
Ush2AQ2QI47 Hmgcll1-207ENSMUST00000183979 1136 ntTSL 5 BASIC8.14□□□□□ -1.11
Ush2AQ2QI47 Gm9299-201ENSMUST00000206392 1140 ntBASIC8.14□□□□□ -1.11
Ush2AQ2QI47 Allc-202ENSMUST00000110917 1384 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
Ush2AQ2QI47 Mthfsd-210ENSMUST00000139782 1366 ntTSL 5 BASIC8.14□□□□□ -1.11
Ush2AQ2QI47 Phldb3-204ENSMUST00000206422 2564 ntAPPRIS P1 TSL 5 BASIC8.14□□□□□ -1.11
Ush2AQ2QI47 Pomgnt2-206ENSMUST00000216669 2504 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
Ush2AQ2QI47 Prdm11-201ENSMUST00000111272 3012 ntAPPRIS P1 TSL 5 BASIC8.14□□□□□ -1.11
Ush2AQ2QI47 Cd27-202ENSMUST00000112281 832 ntTSL 3 BASIC8.14□□□□□ -1.11
Ush2AQ2QI47 Gsto2-202ENSMUST00000120645 1277 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
Ush2AQ2QI47 Gm16087-201ENSMUST00000124395 964 ntTSL 1 (best) BASIC8.14□□□□□ -1.11
Ush2AQ2QI47 Gm15738-202ENSMUST00000140892 427 ntTSL 2 BASIC8.14□□□□□ -1.11
Ush2AQ2QI47 Gm29152-201ENSMUST00000189284 325 ntTSL 5 BASIC8.14□□□□□ -1.11
Ush2AQ2QI47 4930438A08Rik-202ENSMUST00000208022 918 ntTSL 5 BASIC8.14□□□□□ -1.11
Ush2AQ2QI47 Lrmda-201ENSMUST00000075639 908 ntAPPRIS P2 TSL 1 (best) BASIC8.14□□□□□ -1.11
Ush2AQ2QI47 Aif1l-201ENSMUST00000001920 3117 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
Ush2AQ2QI47 Gabra5-202ENSMUST00000206382 2607 ntAPPRIS P1 TSL 5 BASIC8.14□□□□□ -1.11
Ush2AQ2QI47 AC131104.1-201ENSMUST00000222118 1739 ntTSL 5 BASIC8.13□□□□□ -1.11
Ush2AQ2QI47 Klhl33-202ENSMUST00000170855 1422 ntTSL 1 (best) BASIC8.13□□□□□ -1.11
Ush2AQ2QI47 4933415F23Rik-201ENSMUST00000073179 1781 ntAPPRIS P1 BASIC8.13□□□□□ -1.11
Ush2AQ2QI47 Gpr12-203ENSMUST00000197431 1455 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
Ush2AQ2QI47 Gm15557-201ENSMUST00000109629 1380 ntAPPRIS P1 TSL 5 BASIC8.13□□□□□ -1.11
Ush2AQ2QI47 Ighv1-61-201ENSMUST00000103531 351 ntAPPRIS P1 BASIC8.13□□□□□ -1.11
Ush2AQ2QI47 Gm11814-201ENSMUST00000119515 929 ntBASIC8.13□□□□□ -1.11
Ush2AQ2QI47 A730061H03Rik-201ENSMUST00000066106 465 ntAPPRIS P1 BASIC8.13□□□□□ -1.11
Ush2AQ2QI47 Auh-202ENSMUST00000110031 3235 ntTSL 1 (best) BASIC8.13□□□□□ -1.11
Ush2AQ2QI47 Gas2-203ENSMUST00000107591 2232 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
Ush2AQ2QI47 Bud23-203ENSMUST00000111205 1169 ntAPPRIS ALT2 TSL 3 BASIC8.13□□□□□ -1.11
Ush2AQ2QI47 Crybb3-203ENSMUST00000118226 892 ntAPPRIS P1 TSL 3 BASIC8.13□□□□□ -1.11
Ush2AQ2QI47 Crybb3-204ENSMUST00000119627 828 ntAPPRIS P1 TSL 2 BASIC8.13□□□□□ -1.11
Ush2AQ2QI47 Gm15701-201ENSMUST00000129559 573 ntTSL 3 BASIC8.13□□□□□ -1.11
Ush2AQ2QI47 Gm16136-203ENSMUST00000162520 1121 ntTSL 2 BASIC8.13□□□□□ -1.11
Ush2AQ2QI47 CT030182.1-201ENSMUST00000225935 533 ntBASIC8.13□□□□□ -1.11
Retrieved 100 of 76,532 protein–RNA pairs in 23.3 ms