Protein–RNA interactions for Protein: Q08423

Tff1, Trefoil factor 1, mousemouse

Predictions only

Length 87 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tff1Q08423 AC132265.1-201ENSMUST00000219233 1665 ntBASIC12.93□□□□□ -0.34
Tff1Q08423 Cfap97-202ENSMUST00000110376 2043 ntAPPRIS ALT2 TSL 5 BASIC12.93□□□□□ -0.34
Tff1Q08423 Nrg2-203ENSMUST00000115713 3001 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
Tff1Q08423 Gm16201-202ENSMUST00000139218 2330 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Tff1Q08423 Nxpe3-201ENSMUST00000099705 6430 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Tff1Q08423 Fam8a1-201ENSMUST00000099547 3664 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Tff1Q08423 Mir770-201ENSMUST00000103252 94 ntBASIC12.93□□□□□ -0.34
Tff1Q08423 Fgf20-202ENSMUST00000118639 587 ntTSL 3 BASIC12.93□□□□□ -0.34
Tff1Q08423 AC156576.2-201ENSMUST00000222752 503 ntTSL 5 BASIC12.93□□□□□ -0.34
Tff1Q08423 3110040N11Rik-201ENSMUST00000026092 887 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Tff1Q08423 Pafah1b3-201ENSMUST00000005583 901 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Tff1Q08423 4933427E11Rik-201ENSMUST00000056711 1214 ntBASIC12.93□□□□□ -0.34
Tff1Q08423 Prima1-201ENSMUST00000074416 909 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Tff1Q08423 Arhgef12-202ENSMUST00000165665 10752 ntAPPRIS P2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Tff1Q08423 Dmtn-201ENSMUST00000022694 5418 ntAPPRIS ALT1 TSL 5 BASIC12.93□□□□□ -0.34
Tff1Q08423 Hoxaas2-202ENSMUST00000155922 1567 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Tff1Q08423 Atp11b-201ENSMUST00000029257 4868 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Tff1Q08423 Kifc3-203ENSMUST00000169748 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Tff1Q08423 P3h1-204ENSMUST00000121111 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Tff1Q08423 Fam83g-202ENSMUST00000093019 4778 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Tff1Q08423 Pou2f2-201ENSMUST00000098679 2340 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Tff1Q08423 Mpped1-201ENSMUST00000046168 3265 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Tff1Q08423 Sox1ot-202ENSMUST00000186174 7420 ntTSL 5 BASIC12.93□□□□□ -0.34
Tff1Q08423 9230020A06Rik-203ENSMUST00000214621 1682 ntTSL 5 BASIC12.93□□□□□ -0.34
Tff1Q08423 Tyk2-205ENSMUST00000214864 1662 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Tff1Q08423 Snn-201ENSMUST00000089011 2902 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Tff1Q08423 Slc24a3-202ENSMUST00000110007 4048 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Tff1Q08423 Hist3h2a-201ENSMUST00000108817 2146 ntAPPRIS P1 BASIC12.92□□□□□ -0.34
Tff1Q08423 Trim11-201ENSMUST00000093061 2251 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Tff1Q08423 Tbl1x-201ENSMUST00000088217 5234 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Tff1Q08423 1700025L06Rik-203ENSMUST00000211477 1623 ntTSL 5 BASIC12.92□□□□□ -0.34
Tff1Q08423 Steap2-205ENSMUST00000115427 3470 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Tff1Q08423 Repin1-207ENSMUST00000163452 2959 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
Tff1Q08423 Srsf11-204ENSMUST00000121326 3106 ntAPPRIS P4 TSL 5 BASIC12.92□□□□□ -0.34
Tff1Q08423 Mbtps2-201ENSMUST00000058098 4797 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Tff1Q08423 Rgs9-202ENSMUST00000103062 1743 ntTSL 5 BASIC12.92□□□□□ -0.34
Tff1Q08423 Tsacc-202ENSMUST00000107556 584 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Tff1Q08423 Tpm2-203ENSMUST00000107914 1164 ntAPPRIS ALT1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Tff1Q08423 Sgpl1-202ENSMUST00000122259 4102 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Tff1Q08423 Gm19553-201ENSMUST00000175723 494 ntTSL 5 BASIC12.92□□□□□ -0.34
Tff1Q08423 Rps6kl1-201ENSMUST00000019379 2304 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Tff1Q08423 Gm45328-201ENSMUST00000210942 917 ntBASIC12.92□□□□□ -0.34
Tff1Q08423 AC163637.1-201ENSMUST00000215491 1894 ntBASIC12.92□□□□□ -0.34
Tff1Q08423 Twf2-201ENSMUST00000024047 1596 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Tff1Q08423 Hpn-201ENSMUST00000039435 1743 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Tff1Q08423 Pnmt-201ENSMUST00000041301 1154 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Tff1Q08423 Fbxo34-201ENSMUST00000043112 2937 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
Tff1Q08423 Prlhr-201ENSMUST00000051277 1572 ntAPPRIS P1 BASIC12.92□□□□□ -0.34
Tff1Q08423 Spdya-201ENSMUST00000064420 1877 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Tff1Q08423 Thoc7-201ENSMUST00000065865 937 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Tff1Q08423 Rimkla-201ENSMUST00000049994 4097 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Tff1Q08423 Trim65-201ENSMUST00000067632 3048 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Tff1Q08423 Repin1-202ENSMUST00000118229 3138 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Tff1Q08423 P2ry2-206ENSMUST00000208340 2693 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Tff1Q08423 4933421O10Rik-201ENSMUST00000155691 3847 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Tff1Q08423 Med7-203ENSMUST00000109232 2547 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Tff1Q08423 Iqsec3-201ENSMUST00000046373 6840 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Tff1Q08423 Car10-205ENSMUST00000107861 2613 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Tff1Q08423 Rnf207-201ENSMUST00000076183 2466 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Tff1Q08423 Acd-201ENSMUST00000042608 3154 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Tff1Q08423 Hcfc2-201ENSMUST00000020478 3422 ntAPPRIS P1 TSL 5 BASIC12.91□□□□□ -0.34
Tff1Q08423 Alas2-201ENSMUST00000066337 2037 ntAPPRIS P3 TSL 1 (best) BASIC12.91□□□□□ -0.34
Tff1Q08423 Mettl7a1-201ENSMUST00000067752 1883 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Tff1Q08423 Zfp879-203ENSMUST00000109134 2414 ntAPPRIS P1 TSL 5 BASIC12.91□□□□□ -0.34
Tff1Q08423 Zfp879-201ENSMUST00000049625 2408 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Tff1Q08423 D630044L22Rik-201ENSMUST00000181174 2964 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Tff1Q08423 Hsf4-201ENSMUST00000036127 1739 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Tff1Q08423 Fam155a-206ENSMUST00000208933 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Tff1Q08423 Akirin1-201ENSMUST00000102636 3052 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Tff1Q08423 Abhd3-203ENSMUST00000117828 1962 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Tff1Q08423 Ptprm-202ENSMUST00000223982 4802 ntAPPRIS P2 BASIC12.91□□□□□ -0.34
Tff1Q08423 Jup-202ENSMUST00000107403 2386 ntAPPRIS P1 TSL 5 BASIC12.91□□□□□ -0.34
Tff1Q08423 Prr23a3-201ENSMUST00000167951 1817 ntAPPRIS P1 BASIC12.91□□□□□ -0.34
Tff1Q08423 Pacs2-201ENSMUST00000084891 5480 ntAPPRIS P2 TSL 5 BASIC12.91□□□□□ -0.34
Tff1Q08423 Agbl5-213ENSMUST00000201917 3579 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Tff1Q08423 Pemt-203ENSMUST00000102693 961 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Tff1Q08423 Gm11860-201ENSMUST00000122346 1010 ntBASIC12.91□□□□□ -0.34
Tff1Q08423 Oip5-202ENSMUST00000123818 1082 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Tff1Q08423 Uba52-203ENSMUST00000125184 711 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Tff1Q08423 Atp6v1g2-203ENSMUST00000130992 524 ntTSL 2 BASIC12.91□□□□□ -0.34
Tff1Q08423 Slbp-205ENSMUST00000139518 1191 ntAPPRIS ALT2 TSL 2 BASIC12.91□□□□□ -0.34
Tff1Q08423 Epsti1-202ENSMUST00000169978 1175 ntAPPRIS ALT2 TSL 5 BASIC12.91□□□□□ -0.34
Tff1Q08423 Pyy-201ENSMUST00000017455 555 ntAPPRIS P3 TSL 1 (best) BASIC12.91□□□□□ -0.34
Tff1Q08423 Gm28051-201ENSMUST00000179306 445 ntAPPRIS P1 TSL 2 BASIC12.91□□□□□ -0.34
Tff1Q08423 Gm26644-201ENSMUST00000181365 958 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Tff1Q08423 Epsti1-203ENSMUST00000227903 1178 ntAPPRIS ALT2 BASIC12.91□□□□□ -0.34
Tff1Q08423 Odf3b-201ENSMUST00000049968 1040 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Tff1Q08423 BC049762-201ENSMUST00000054226 760 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Tff1Q08423 Fhl3-201ENSMUST00000038684 1664 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Tff1Q08423 Asic4-201ENSMUST00000037708 2464 ntAPPRIS P2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Tff1Q08423 Zbed5-201ENSMUST00000041466 2492 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Tff1Q08423 Gm42743-201ENSMUST00000051089 1511 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Tff1Q08423 Tcf25-205ENSMUST00000212470 2572 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Tff1Q08423 Rgl1-203ENSMUST00000111859 5092 ntAPPRIS P1 TSL 5 BASIC12.91□□□□□ -0.34
Tff1Q08423 Zfp12-201ENSMUST00000032591 5265 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Tff1Q08423 Hmga1b-201ENSMUST00000105046 1626 ntAPPRIS P1 BASIC12.91□□□□□ -0.34
Tff1Q08423 Mamstr-201ENSMUST00000148532 1606 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Tff1Q08423 Erlec1-201ENSMUST00000073192 2532 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Tff1Q08423 Xylt2-201ENSMUST00000116349 3442 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Tff1Q08423 Vwa8-202ENSMUST00000227255 3406 ntAPPRIS ALT2 BASIC12.91□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 48.8 ms