Protein–RNA interactions for Protein: Q05793

Hspg2, Basement membrane-specific heparan sulfate proteoglycan core protein, mousemouse

Known RBP Predictions only

Length 3,707 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hspg2Q05793 Ighv5-17-201ENSMUST00000103459 405 ntAPPRIS P1 BASIC11.33□□□□□ -0.6
Hspg2Q05793 Rsph9-201ENSMUST00000024762 966 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Hspg2Q05793 Taf6l-212ENSMUST00000177216 2167 ntAPPRIS P1 TSL 5 BASIC11.33□□□□□ -0.6
Hspg2Q05793 Zfp13-202ENSMUST00000115516 2104 ntAPPRIS ALT2 TSL 1 (best) BASIC11.33□□□□□ -0.6
Hspg2Q05793 Yes1-205ENSMUST00000202543 2657 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Hspg2Q05793 Spdef-205ENSMUST00000167489 1708 ntAPPRIS P1 TSL 5 BASIC11.33□□□□□ -0.6
Hspg2Q05793 Tead4-201ENSMUST00000006311 3076 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Hspg2Q05793 Fuz-201ENSMUST00000071207 1698 ntAPPRIS P2 TSL 1 (best) BASIC11.33□□□□□ -0.6
Hspg2Q05793 Eif2b2-201ENSMUST00000004910 1605 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Hspg2Q05793 Sncaip-205ENSMUST00000178011 3433 ntAPPRIS P3 TSL 1 (best) BASIC11.33□□□□□ -0.6
Hspg2Q05793 Gm23984-201ENSMUST00000157139 203 ntBASIC11.33□□□□□ -0.6
Hspg2Q05793 Lrcol1-202ENSMUST00000185691 764 ntAPPRIS P2 TSL 1 (best) BASIC11.33□□□□□ -0.6
Hspg2Q05793 Inhba-202ENSMUST00000164993 1529 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Hspg2Q05793 Dlg1-203ENSMUST00000100001 4711 ntAPPRIS ALT2 TSL 5 BASIC11.33□□□□□ -0.6
Hspg2Q05793 Map3k10-201ENSMUST00000036453 3682 ntAPPRIS P2 TSL 1 (best) BASIC11.33□□□□□ -0.6
Hspg2Q05793 Armc9-205ENSMUST00000131412 2160 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Hspg2Q05793 Pola2-202ENSMUST00000165143 2397 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Hspg2Q05793 Csnk1e-202ENSMUST00000120859 1391 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Hspg2Q05793 Gm45293-201ENSMUST00000209754 1812 ntBASIC11.33□□□□□ -0.6
Hspg2Q05793 Matn1-201ENSMUST00000102576 2001 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Hspg2Q05793 Pld2-202ENSMUST00000108556 3391 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Hspg2Q05793 Gm26755-201ENSMUST00000180703 2657 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Hspg2Q05793 Chsy1-201ENSMUST00000036372 4176 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Hspg2Q05793 A530084C06Rik-201ENSMUST00000170573 3200 ntAPPRIS P1 BASIC11.33□□□□□ -0.6
Hspg2Q05793 Gm45059-201ENSMUST00000205558 1077 ntBASIC11.33□□□□□ -0.6
Hspg2Q05793 Cradd-202ENSMUST00000217809 1115 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Hspg2Q05793 Mrps21-202ENSMUST00000072587 405 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Hspg2Q05793 Zswim7-201ENSMUST00000072916 732 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Hspg2Q05793 Srf-201ENSMUST00000015749 4093 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Hspg2Q05793 Pcolce-201ENSMUST00000031731 1626 ntAPPRIS P2 TSL 1 (best) BASIC11.33□□□□□ -0.6
Hspg2Q05793 Ywhaq-201ENSMUST00000049531 1515 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Hspg2Q05793 Fam193b-201ENSMUST00000021957 4341 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Hspg2Q05793 1700055C04Rik-201ENSMUST00000176450 355 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Hspg2Q05793 Gm34964-201ENSMUST00000207398 417 ntTSL 5 BASIC11.32□□□□□ -0.6
Hspg2Q05793 Tst-201ENSMUST00000058659 1096 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Hspg2Q05793 Ykt6-201ENSMUST00000002818 2541 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Hspg2Q05793 Lingo3-201ENSMUST00000053986 3439 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Hspg2Q05793 Large2-203ENSMUST00000111284 2449 ntAPPRIS ALT2 TSL 5 BASIC11.32□□□□□ -0.6
Hspg2Q05793 Arntl-203ENSMUST00000210074 2554 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Hspg2Q05793 Wdr86-201ENSMUST00000068693 2364 ntAPPRIS P1 TSL 2 BASIC11.32□□□□□ -0.6
Hspg2Q05793 Eldr-203ENSMUST00000130392 1540 ntTSL 2 BASIC11.32□□□□□ -0.6
Hspg2Q05793 Sh3bp2-203ENSMUST00000118545 3034 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Hspg2Q05793 Smoc2-201ENSMUST00000024660 2832 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Hspg2Q05793 Syt7-204ENSMUST00000223586 1344 ntBASIC11.32□□□□□ -0.6
Hspg2Q05793 Ubp1-206ENSMUST00000216558 1623 ntAPPRIS P4 TSL 1 (best) BASIC11.32□□□□□ -0.6
Hspg2Q05793 Bpifb5-201ENSMUST00000045959 1637 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Hspg2Q05793 Dnajc8-206ENSMUST00000105940 772 ntTSL 5 BASIC11.32□□□□□ -0.6
Hspg2Q05793 Atp6v1f-203ENSMUST00000149646 806 ntTSL 5 BASIC11.32□□□□□ -0.6
Hspg2Q05793 Nploc4-202ENSMUST00000103017 4025 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Hspg2Q05793 Inhbb-201ENSMUST00000038765 4255 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Hspg2Q05793 Lias-202ENSMUST00000122026 1668 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Hspg2Q05793 Papola-203ENSMUST00000163473 2544 ntTSL 5 BASIC11.32□□□□□ -0.6
Hspg2Q05793 Plcxd1-201ENSMUST00000086687 1346 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Hspg2Q05793 Gm6973-201ENSMUST00000117080 721 ntBASIC11.32□□□□□ -0.6
Hspg2Q05793 Pcgf1-202ENSMUST00000165164 918 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Hspg2Q05793 Nabp1-202ENSMUST00000185534 708 ntTSL 2 BASIC11.32□□□□□ -0.6
Hspg2Q05793 Gm33785-201ENSMUST00000222961 886 ntTSL 5 BASIC11.32□□□□□ -0.6
Hspg2Q05793 AC149294.4-201ENSMUST00000227870 882 ntBASIC11.32□□□□□ -0.6
Hspg2Q05793 Nradd-201ENSMUST00000035069 1223 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Hspg2Q05793 Akr1b7-201ENSMUST00000007449 1281 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Hspg2Q05793 Zfp746-201ENSMUST00000073124 3651 ntAPPRIS P3 TSL 1 (best) BASIC11.32□□□□□ -0.6
Hspg2Q05793 Gm10532-201ENSMUST00000181913 2301 ntTSL 2 BASIC11.31□□□□□ -0.6
Hspg2Q05793 Gpr137b-201ENSMUST00000021738 2971 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Hspg2Q05793 Nkd2-202ENSMUST00000118096 2801 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Hspg2Q05793 Gm6415-201ENSMUST00000118488 348 ntBASIC11.31□□□□□ -0.6
Hspg2Q05793 Prss29-201ENSMUST00000024993 1178 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Hspg2Q05793 Fbxo25-201ENSMUST00000043520 2012 ntAPPRIS P3 TSL 1 (best) BASIC11.31□□□□□ -0.6
Hspg2Q05793 Gk5-201ENSMUST00000085217 2815 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Hspg2Q05793 Rtp2-201ENSMUST00000061030 2421 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Hspg2Q05793 Anapc5-201ENSMUST00000086216 2760 ntAPPRIS P3 TSL 1 (best) BASIC11.31□□□□□ -0.6
Hspg2Q05793 Arntl2-204ENSMUST00000111639 2923 ntAPPRIS P3 TSL 5 BASIC11.31□□□□□ -0.6
Hspg2Q05793 Wnt8b-201ENSMUST00000041163 3376 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Hspg2Q05793 Gm11425-201ENSMUST00000119608 498 ntBASIC11.31□□□□□ -0.6
Hspg2Q05793 Rpl12-203ENSMUST00000126610 1242 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Hspg2Q05793 Gm15384-201ENSMUST00000138832 486 ntTSL 5 BASIC11.31□□□□□ -0.6
Hspg2Q05793 1700110K17Rik-202ENSMUST00000156511 927 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Hspg2Q05793 BC051226-201ENSMUST00000172526 837 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Hspg2Q05793 Prr29-203ENSMUST00000185986 983 ntAPPRIS ALT2 TSL 5 BASIC11.31□□□□□ -0.6
Hspg2Q05793 Gm6745-201ENSMUST00000199216 526 ntBASIC11.31□□□□□ -0.6
Hspg2Q05793 Ucn-201ENSMUST00000043475 504 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Hspg2Q05793 Gm9396-201ENSMUST00000076703 567 ntBASIC11.31□□□□□ -0.6
Hspg2Q05793 Gm3365-201ENSMUST00000216296 1480 ntBASIC11.31□□□□□ -0.6
Hspg2Q05793 Pgm3-202ENSMUST00000072585 1920 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Hspg2Q05793 Dcaf13-201ENSMUST00000022909 1551 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Hspg2Q05793 Fars2-201ENSMUST00000021857 2125 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Hspg2Q05793 Slc39a7-201ENSMUST00000025186 2244 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Hspg2Q05793 Gm11696-201ENSMUST00000070956 2765 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Hspg2Q05793 Efhd1-201ENSMUST00000027472 1854 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Hspg2Q05793 Trim63-201ENSMUST00000030638 1855 ntAPPRIS ALT2 TSL 5 BASIC11.31□□□□□ -0.6
Hspg2Q05793 Nfic-207ENSMUST00000221817 1531 ntTSL 5 BASIC11.31□□□□□ -0.6
Hspg2Q05793 Enah-202ENSMUST00000111024 3572 ntAPPRIS ALT2 TSL 5 BASIC11.31□□□□□ -0.6
Hspg2Q05793 Snx16-201ENSMUST00000029047 2288 ntAPPRIS P3 TSL 1 (best) BASIC11.31□□□□□ -0.6
Hspg2Q05793 Slc35f2-201ENSMUST00000048670 2558 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Hspg2Q05793 Pdlim1-201ENSMUST00000068439 2571 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Hspg2Q05793 Selenoh-202ENSMUST00000102647 654 ntAPPRIS P2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Hspg2Q05793 Krtap16-3-201ENSMUST00000179707 601 ntAPPRIS P1 BASIC11.31□□□□□ -0.6
Hspg2Q05793 Gm37267-201ENSMUST00000194222 681 ntTSL 2 BASIC11.31□□□□□ -0.6
Hspg2Q05793 Klk5-201ENSMUST00000048444 1239 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Hspg2Q05793 9230020A06Rik-203ENSMUST00000214621 1682 ntTSL 5 BASIC11.31□□□□□ -0.6
Hspg2Q05793 Phtf1-202ENSMUST00000063717 3327 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Retrieved 100 of 76,532 protein–RNA pairs in 30.3 ms