Protein–RNA interactions for Protein: Q02789

Cacna1s, Voltage-dependent L-type calcium channel subunit alpha-1S, mousemouse

Predictions only

Length 1,880 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cacna1sQ02789 Tmem52-204ENSMUST00000178188 908 ntAPPRIS ALT2 TSL 2 BASIC19.42■□□□□ 0.7
Cacna1sQ02789 Tmem52-205ENSMUST00000178238 968 ntAPPRIS P4 TSL 1 (best) BASIC19.42■□□□□ 0.7
Cacna1sQ02789 Efhd1-201ENSMUST00000027472 1854 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Cacna1sQ02789 Spryd4-201ENSMUST00000061995 1583 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Cacna1sQ02789 Lpar5-201ENSMUST00000088292 1393 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Cacna1sQ02789 Brd1-203ENSMUST00000109381 4886 ntTSL 5 BASIC19.42■□□□□ 0.7
Cacna1sQ02789 Sh2b1-203ENSMUST00000205440 3089 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Cacna1sQ02789 Magi2-205ENSMUST00000197354 4785 ntAPPRIS ALT2 TSL 5 BASIC19.42■□□□□ 0.7
Cacna1sQ02789 Adk-207ENSMUST00000224069 1818 ntAPPRIS ALT1 BASIC19.42■□□□□ 0.7
Cacna1sQ02789 Gm34419-201ENSMUST00000211383 1387 ntTSL 5 BASIC19.41■□□□□ 0.7
Cacna1sQ02789 Gm21887-201ENSMUST00000178789 441 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
Cacna1sQ02789 Gm42902-201ENSMUST00000199508 662 ntTSL 5 BASIC19.41■□□□□ 0.7
Cacna1sQ02789 Klhl2-205ENSMUST00000210166 5126 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Cacna1sQ02789 Cep55-203ENSMUST00000169673 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Cacna1sQ02789 Hey2-201ENSMUST00000019924 2550 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Cacna1sQ02789 Pptc7-201ENSMUST00000053426 4644 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Cacna1sQ02789 Gm26676-201ENSMUST00000181877 2226 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Cacna1sQ02789 Taf5l-201ENSMUST00000093039 2912 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Cacna1sQ02789 Tmem176b-203ENSMUST00000166247 1414 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Cacna1sQ02789 Mob2-206ENSMUST00000211206 2140 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Cacna1sQ02789 Tprn-201ENSMUST00000114336 2787 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Cacna1sQ02789 Nfyb-204ENSMUST00000130911 2554 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Cacna1sQ02789 Dnajc5-202ENSMUST00000108796 934 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
Cacna1sQ02789 Sar1b-201ENSMUST00000020653 1201 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Cacna1sQ02789 Fau-201ENSMUST00000043074 574 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Cacna1sQ02789 Prtn3-201ENSMUST00000006679 1025 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Cacna1sQ02789 Irgc1-204ENSMUST00000205776 1835 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Cacna1sQ02789 Cyp2d10-201ENSMUST00000072776 1647 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Cacna1sQ02789 Dyx1c1-202ENSMUST00000098567 1612 ntAPPRIS ALT2 TSL 5 BASIC19.4■□□□□ 0.7
Cacna1sQ02789 Gpr3-202ENSMUST00000105911 2518 ntAPPRIS P1 BASIC19.4■□□□□ 0.7
Cacna1sQ02789 Nt5c3b-205ENSMUST00000107399 1427 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Cacna1sQ02789 Spdya-201ENSMUST00000064420 1877 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Cacna1sQ02789 Acvr2b-205ENSMUST00000215746 3175 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Cacna1sQ02789 Gm15824-201ENSMUST00000119516 955 ntBASIC19.4■□□□□ 0.7
Cacna1sQ02789 Rps15-ps2-201ENSMUST00000121788 438 ntBASIC19.4■□□□□ 0.7
Cacna1sQ02789 Mir1897-201ENSMUST00000122581 272 ntBASIC19.4■□□□□ 0.7
Cacna1sQ02789 Mturn-202ENSMUST00000187701 503 ntTSL 5 BASIC19.4■□□□□ 0.7
Cacna1sQ02789 1700029B24Rik-201ENSMUST00000194040 497 ntBASIC19.4■□□□□ 0.7
Cacna1sQ02789 Gm37917-201ENSMUST00000194711 392 ntBASIC19.4■□□□□ 0.7
Cacna1sQ02789 Gm4129-201ENSMUST00000220083 625 ntTSL 3 BASIC19.4■□□□□ 0.7
Cacna1sQ02789 Olfr373-201ENSMUST00000074540 945 ntAPPRIS P1 BASIC19.4■□□□□ 0.7
Cacna1sQ02789 Olfr1214-201ENSMUST00000099804 936 ntAPPRIS P1 BASIC19.4■□□□□ 0.7
Cacna1sQ02789 Gm6756-201ENSMUST00000180647 1620 ntBASIC19.4■□□□□ 0.7
Cacna1sQ02789 B230217O12Rik-201ENSMUST00000181921 1642 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Cacna1sQ02789 Endou-202ENSMUST00000100249 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Cacna1sQ02789 Kcnab2-202ENSMUST00000105648 1576 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
Cacna1sQ02789 Eif4a3-201ENSMUST00000026667 1509 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Cacna1sQ02789 C1galt1-201ENSMUST00000040159 6092 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Cacna1sQ02789 Il9r-202ENSMUST00000128311 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Cacna1sQ02789 Mccc2-201ENSMUST00000022148 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Cacna1sQ02789 Xxylt1-201ENSMUST00000055389 2987 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
Cacna1sQ02789 Myl12a-206ENSMUST00000148960 1937 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
Cacna1sQ02789 A930015D03Rik-201ENSMUST00000173900 1111 ntTSL 1 (best) BASIC19.39■□□□□ 0.7
Cacna1sQ02789 Ip6k2-210ENSMUST00000194875 748 ntTSL 2 BASIC19.39■□□□□ 0.7
Cacna1sQ02789 Gm36236-201ENSMUST00000220780 701 ntTSL 3 BASIC19.39■□□□□ 0.7
Cacna1sQ02789 Gm16476-201ENSMUST00000221544 139 ntBASIC19.39■□□□□ 0.7
Cacna1sQ02789 Apol7d-201ENSMUST00000097699 826 ntTSL 2 BASIC19.39■□□□□ 0.7
Cacna1sQ02789 Sdf4-202ENSMUST00000097734 973 ntTSL 1 (best) BASIC19.39■□□□□ 0.7
Cacna1sQ02789 Dlg3-202ENSMUST00000087984 4956 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
Cacna1sQ02789 Egln1-201ENSMUST00000034469 3594 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Cacna1sQ02789 Eefsec-201ENSMUST00000165242 2679 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Cacna1sQ02789 Fbxw5-201ENSMUST00000015239 2388 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Cacna1sQ02789 Elf2-202ENSMUST00000091144 2366 ntTSL 5 BASIC19.39■□□□□ 0.69
Cacna1sQ02789 Rapsn-203ENSMUST00000111446 1458 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Cacna1sQ02789 Ldhal6b-201ENSMUST00000189788 1445 ntAPPRIS P1 BASIC19.39■□□□□ 0.69
Cacna1sQ02789 Phax-201ENSMUST00000008445 1942 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.69
Cacna1sQ02789 Prrxl1-203ENSMUST00000187377 1629 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Cacna1sQ02789 Arpc1a-201ENSMUST00000031625 1632 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Cacna1sQ02789 Mettl7a3-201ENSMUST00000075420 1618 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Cacna1sQ02789 Phf1-201ENSMUST00000073724 2429 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Cacna1sQ02789 Gm5479-201ENSMUST00000160578 435 ntBASIC19.39■□□□□ 0.69
Cacna1sQ02789 Pfdn6-205ENSMUST00000174426 396 ntTSL 2 BASIC19.39■□□□□ 0.69
Cacna1sQ02789 AC149588.3-201ENSMUST00000227515 150 ntBASIC19.39■□□□□ 0.69
Cacna1sQ02789 Senp3-202ENSMUST00000066760 2219 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Cacna1sQ02789 Irf7-201ENSMUST00000026571 1916 ntAPPRIS P3 TSL 1 (best) BASIC19.38■□□□□ 0.69
Cacna1sQ02789 Ubac2-201ENSMUST00000039803 2139 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Cacna1sQ02789 Prrg2-208ENSMUST00000210690 1623 ntAPPRIS P2 TSL 1 (best) BASIC19.38■□□□□ 0.69
Cacna1sQ02789 Klhdc4-201ENSMUST00000045884 2078 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Cacna1sQ02789 Usp48-205ENSMUST00000105840 5741 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
Cacna1sQ02789 Bcat2-202ENSMUST00000120864 1536 ntTSL 5 BASIC19.38■□□□□ 0.69
Cacna1sQ02789 Nsmf-204ENSMUST00000102931 2830 ntTSL 5 BASIC19.38■□□□□ 0.69
Cacna1sQ02789 Gm15678-201ENSMUST00000117573 960 ntBASIC19.38■□□□□ 0.69
Cacna1sQ02789 Gm5149-201ENSMUST00000199768 620 ntTSL 3 BASIC19.38■□□□□ 0.69
Cacna1sQ02789 Csk-201ENSMUST00000034863 2749 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Cacna1sQ02789 Tmod2-208ENSMUST00000215614 1921 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Cacna1sQ02789 Acbd5-206ENSMUST00000155602 1714 ntAPPRIS ALT2 TSL 2 BASIC19.38■□□□□ 0.69
Cacna1sQ02789 Nsd3-207ENSMUST00000143445 2416 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Cacna1sQ02789 Olfr160-203ENSMUST00000215727 1667 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
Cacna1sQ02789 Mtrf1l-201ENSMUST00000019908 2588 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Cacna1sQ02789 Trav4-2-201ENSMUST00000103637 370 ntAPPRIS P1 BASIC19.37■□□□□ 0.69
Cacna1sQ02789 Mrps17-202ENSMUST00000118420 843 ntAPPRIS P1 TSL 2 BASIC19.37■□□□□ 0.69
Cacna1sQ02789 AC162801.1-201ENSMUST00000220612 198 ntBASIC19.37■□□□□ 0.69
Cacna1sQ02789 Ins1-201ENSMUST00000039652 1016 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Cacna1sQ02789 Ftl1-201ENSMUST00000094434 968 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Cacna1sQ02789 Itgb5-201ENSMUST00000069345 3056 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Cacna1sQ02789 4930425O10Rik-201ENSMUST00000197761 1418 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Cacna1sQ02789 Sybu-203ENSMUST00000110269 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Cacna1sQ02789 Vill-207ENSMUST00000141185 1645 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Cacna1sQ02789 Lcn5-203ENSMUST00000100313 660 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Cacna1sQ02789 Pcgf1-202ENSMUST00000165164 918 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Retrieved 100 of 76,532 protein–RNA pairs in 31.5 ms