Protein–RNA interactions for Protein: Q01149

Col1a2, Collagen alpha-2(I) chain, mousemouse

Predictions only

Length 1,372 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col1a2Q01149 Kcmf1-201ENSMUST00000068697 3251 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Col1a2Q01149 Bclaf3-201ENSMUST00000057180 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Col1a2Q01149 Tcea1-202ENSMUST00000165720 2854 ntTSL 5 BASIC19.32■□□□□ 0.68
Col1a2Q01149 Fbxl5-207ENSMUST00000124610 2306 ntTSL 5 BASIC19.32■□□□□ 0.68
Col1a2Q01149 Rnf181-201ENSMUST00000069580 1434 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
Col1a2Q01149 Efcab14-204ENSMUST00000106525 2792 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Col1a2Q01149 Gm16976-201ENSMUST00000099718 1894 ntTSL 5 BASIC19.32■□□□□ 0.68
Col1a2Q01149 Arl6ip1-201ENSMUST00000032888 2171 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Col1a2Q01149 App-207ENSMUST00000227737 2827 ntBASIC19.32■□□□□ 0.68
Col1a2Q01149 Oas1b-201ENSMUST00000086377 1832 ntTSL 5 BASIC19.32■□□□□ 0.68
Col1a2Q01149 4933434E20Rik-204ENSMUST00000159064 1344 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Col1a2Q01149 Fbxl19-204ENSMUST00000188580 2601 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Col1a2Q01149 Dmpk-202ENSMUST00000108473 2588 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Col1a2Q01149 Klhl34-201ENSMUST00000087157 1935 ntAPPRIS P1 BASIC19.32■□□□□ 0.68
Col1a2Q01149 Polr2i-202ENSMUST00000108192 508 ntTSL 2 BASIC19.32■□□□□ 0.68
Col1a2Q01149 Znhit1-204ENSMUST00000111091 1070 ntTSL 5 BASIC19.32■□□□□ 0.68
Col1a2Q01149 Tpm3-205ENSMUST00000121503 1139 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Col1a2Q01149 Rprl2-201ENSMUST00000157150 290 ntBASIC19.32■□□□□ 0.68
Col1a2Q01149 Gm17455-201ENSMUST00000164428 855 ntAPPRIS P1 TSL 3 BASIC19.32■□□□□ 0.68
Col1a2Q01149 Gm18889-201ENSMUST00000174284 929 ntBASIC19.32■□□□□ 0.68
Col1a2Q01149 Mir6990-201ENSMUST00000183724 91 ntBASIC19.32■□□□□ 0.68
Col1a2Q01149 Lce3e-201ENSMUST00000098886 607 ntAPPRIS P1 TSL 3 BASIC19.32■□□□□ 0.68
Col1a2Q01149 Mdp1-201ENSMUST00000002400 1733 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Col1a2Q01149 Rps6kl1-201ENSMUST00000019379 2304 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Col1a2Q01149 Cct7-201ENSMUST00000032078 2441 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Col1a2Q01149 Hnrnpll-205ENSMUST00000184635 3009 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Col1a2Q01149 Gbe1-203ENSMUST00000163832 2984 ntAPPRIS P5 TSL 5 BASIC19.31■□□□□ 0.68
Col1a2Q01149 Irgq-201ENSMUST00000049020 6083 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Col1a2Q01149 Coq10a-205ENSMUST00000220027 1307 ntAPPRIS ALT2 TSL 5 BASIC19.31■□□□□ 0.68
Col1a2Q01149 Armc9-205ENSMUST00000131412 2160 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Col1a2Q01149 Aaed1-202ENSMUST00000220895 2858 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Col1a2Q01149 Gm16675-202ENSMUST00000208508 2586 ntTSL 2 BASIC19.31■□□□□ 0.68
Col1a2Q01149 Cnbd2-201ENSMUST00000037096 2277 ntAPPRIS P2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Col1a2Q01149 Ercc8-202ENSMUST00000120672 1144 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Col1a2Q01149 Gm11788-201ENSMUST00000142520 562 ntTSL 3 BASIC19.31■□□□□ 0.68
Col1a2Q01149 Gm17251-201ENSMUST00000170103 925 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Col1a2Q01149 4930593A02Rik-202ENSMUST00000203879 938 ntTSL 5 BASIC19.31■□□□□ 0.68
Col1a2Q01149 Krtap9-3-201ENSMUST00000062683 759 ntAPPRIS P1 BASIC19.31■□□□□ 0.68
Col1a2Q01149 Krtap19-3-201ENSMUST00000075284 526 ntAPPRIS P1 BASIC19.31■□□□□ 0.68
Col1a2Q01149 Vrk3-201ENSMUST00000002275 1969 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Col1a2Q01149 Efnb2-201ENSMUST00000001319 4793 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Col1a2Q01149 Prr23a3-201ENSMUST00000167951 1817 ntAPPRIS P1 BASIC19.31■□□□□ 0.68
Col1a2Q01149 Ank1-202ENSMUST00000084038 8147 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
Col1a2Q01149 Psrc1-201ENSMUST00000090561 1686 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Col1a2Q01149 Zbtb9-201ENSMUST00000120016 2798 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Col1a2Q01149 Tssc4-201ENSMUST00000060433 1519 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Col1a2Q01149 Mprip-201ENSMUST00000066330 7765 ntAPPRIS ALT2 TSL 5 BASIC19.3■□□□□ 0.68
Col1a2Q01149 Serf2-204ENSMUST00000139253 3056 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Col1a2Q01149 Ephb4-203ENSMUST00000111055 4296 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Col1a2Q01149 Mbp-206ENSMUST00000102812 2108 ntAPPRIS ALT2 TSL 2 BASIC19.3■□□□□ 0.68
Col1a2Q01149 Zswim8-208ENSMUST00000224751 5951 ntAPPRIS ALT2 BASIC19.3■□□□□ 0.68
Col1a2Q01149 4933412A08Rik-201ENSMUST00000061046 1343 ntBASIC19.3■□□□□ 0.68
Col1a2Q01149 Fam171b-201ENSMUST00000051454 5614 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Col1a2Q01149 Luc7l2-208ENSMUST00000161538 4253 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Col1a2Q01149 Wnk2-202ENSMUST00000049265 6738 ntAPPRIS ALT2 TSL 5 BASIC19.3■□□□□ 0.68
Col1a2Q01149 Cbx6-201ENSMUST00000109623 996 ntTSL 5 BASIC19.3■□□□□ 0.68
Col1a2Q01149 Mmab-203ENSMUST00000123256 1277 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Col1a2Q01149 Prr29-205ENSMUST00000190268 1141 ntAPPRIS ALT2 TSL 5 BASIC19.3■□□□□ 0.68
Col1a2Q01149 Ndufs6-204ENSMUST00000223293 757 ntTSL 2 BASIC19.3■□□□□ 0.68
Col1a2Q01149 H2-K1-202ENSMUST00000087189 579 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Col1a2Q01149 G0s2-201ENSMUST00000009777 871 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Col1a2Q01149 Erich4-201ENSMUST00000098663 911 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Col1a2Q01149 Abcb10-201ENSMUST00000075578 4306 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Col1a2Q01149 Gch1-201ENSMUST00000089959 2775 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Col1a2Q01149 Plekhf1-201ENSMUST00000098513 5263 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Col1a2Q01149 Rft1-201ENSMUST00000064230 2387 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Col1a2Q01149 Hivep3-201ENSMUST00000084306 2973 ntBASIC19.29■□□□□ 0.68
Col1a2Q01149 Cmtm1-202ENSMUST00000160596 1900 ntAPPRIS ALT2 TSL 5 BASIC19.29■□□□□ 0.68
Col1a2Q01149 Nfya-206ENSMUST00000160319 1407 ntTSL 5 BASIC19.29■□□□□ 0.68
Col1a2Q01149 Wdr41-205ENSMUST00000160801 3062 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
Col1a2Q01149 Slc4a1ap-206ENSMUST00000201858 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Col1a2Q01149 Tcf3-207ENSMUST00000105343 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Col1a2Q01149 Trav3-1-201ENSMUST00000103569 385 ntAPPRIS P1 BASIC19.29■□□□□ 0.68
Col1a2Q01149 Trav3-4-201ENSMUST00000103670 458 ntAPPRIS P1 BASIC19.29■□□□□ 0.68
Col1a2Q01149 Rerg-203ENSMUST00000119610 890 ntTSL 3 BASIC19.29■□□□□ 0.68
Col1a2Q01149 Haghl-206ENSMUST00000138759 1074 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Col1a2Q01149 Runx2os2-201ENSMUST00000161664 818 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Col1a2Q01149 Gm43474-201ENSMUST00000196415 774 ntBASIC19.29■□□□□ 0.68
Col1a2Q01149 Gm5312-201ENSMUST00000203728 547 ntBASIC19.29■□□□□ 0.68
Col1a2Q01149 AC159635.2-201ENSMUST00000223092 817 ntTSL 5 BASIC19.29■□□□□ 0.68
Col1a2Q01149 CT030684.1-201ENSMUST00000227292 914 ntBASIC19.29■□□□□ 0.68
Col1a2Q01149 Hcrt-201ENSMUST00000055083 586 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Col1a2Q01149 Rnf138rt1-201ENSMUST00000059320 1191 ntAPPRIS P1 BASIC19.29■□□□□ 0.68
Col1a2Q01149 Ppfia1-201ENSMUST00000168134 5181 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
Col1a2Q01149 Trnt1-201ENSMUST00000057578 2283 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Col1a2Q01149 Cyp2ab1-201ENSMUST00000023513 2720 ntTSL 5 BASIC19.29■□□□□ 0.68
Col1a2Q01149 Lpar5-203ENSMUST00000171989 1458 ntAPPRIS P1 TSL 2 BASIC19.29■□□□□ 0.68
Col1a2Q01149 Lefty2-201ENSMUST00000085797 2473 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Col1a2Q01149 Lrig1-201ENSMUST00000032105 4831 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Col1a2Q01149 Gm10501-201ENSMUST00000151136 2200 ntTSL 2 BASIC19.28■□□□□ 0.68
Col1a2Q01149 AC126250.1-201ENSMUST00000228343 1768 ntBASIC19.28■□□□□ 0.68
Col1a2Q01149 Txnrd2-215ENSMUST00000206151 2874 ntAPPRIS P2 TSL 5 BASIC19.28■□□□□ 0.68
Col1a2Q01149 Acsl3-205ENSMUST00000142704 2976 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Col1a2Q01149 Gm27198-201ENSMUST00000184172 1517 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Col1a2Q01149 Kmt2b-201ENSMUST00000006470 8469 ntAPPRIS ALT2 TSL 5 BASIC19.28■□□□□ 0.68
Col1a2Q01149 Itgb4-210ENSMUST00000169928 6160 ntAPPRIS P2 TSL 5 BASIC19.28■□□□□ 0.68
Col1a2Q01149 Pacsin2-203ENSMUST00000171436 3693 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
Col1a2Q01149 Rapgef6-205ENSMUST00000108895 1829 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Col1a2Q01149 Dennd6a-201ENSMUST00000037585 6638 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Col1a2Q01149 1700034J05Rik-202ENSMUST00000111622 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Retrieved 100 of 76,532 protein–RNA pairs in 22.1 ms