Protein–RNA interactions for Protein: P97496

Smarcc1, SWI/SNF complex subunit SMARCC1, mousemouse

Predictions only

Length 1,104 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcc1P97496 Col17a1-202ENSMUST00000086923 5477 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
Smarcc1P97496 Gstm7-201ENSMUST00000004137 1377 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Smarcc1P97496 0610010K14Rik-205ENSMUST00000108575 643 ntTSL 2 BASIC19.37■□□□□ 0.69
Smarcc1P97496 Gm10499-201ENSMUST00000174094 934 ntBASIC19.37■□□□□ 0.69
Smarcc1P97496 Gm27164-201ENSMUST00000184359 723 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Smarcc1P97496 C330022C24Rik-201ENSMUST00000190581 1077 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Smarcc1P97496 Tpi-rs5-201ENSMUST00000216947 774 ntBASIC19.37■□□□□ 0.69
Smarcc1P97496 Gm6594-201ENSMUST00000097278 288 ntAPPRIS P1 BASIC19.37■□□□□ 0.69
Smarcc1P97496 Sucla2-203ENSMUST00000160507 2229 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Smarcc1P97496 Fam171a2-201ENSMUST00000049057 3118 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Smarcc1P97496 E230001N04Rik-202ENSMUST00000181029 2091 ntBASIC19.37■□□□□ 0.69
Smarcc1P97496 Fnbp1-204ENSMUST00000100208 1859 ntTSL 5 BASIC19.37■□□□□ 0.69
Smarcc1P97496 Abtb1-201ENSMUST00000032169 1845 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Smarcc1P97496 Gnas-222ENSMUST00000180362 1645 ntTSL 5 BASIC19.36■□□□□ 0.69
Smarcc1P97496 Pard3-226ENSMUST00000162907 4682 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Smarcc1P97496 Lrp3-201ENSMUST00000118444 3877 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
Smarcc1P97496 Cdv3-202ENSMUST00000072249 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Smarcc1P97496 Ttc6-203ENSMUST00000172939 5782 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
Smarcc1P97496 Ppil1-201ENSMUST00000024802 1434 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Smarcc1P97496 Anp32a-201ENSMUST00000085519 2113 ntAPPRIS P2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Smarcc1P97496 Ivns1abp-203ENSMUST00000111887 2783 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Smarcc1P97496 B4galt3-201ENSMUST00000064272 1998 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Smarcc1P97496 Psip1-201ENSMUST00000030207 3251 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Smarcc1P97496 Gm12151-201ENSMUST00000121374 290 ntBASIC19.36■□□□□ 0.69
Smarcc1P97496 Mvk-206ENSMUST00000137167 1049 ntTSL 2 BASIC19.36■□□□□ 0.69
Smarcc1P97496 1700108N11Rik-201ENSMUST00000153051 917 ntTSL 2 BASIC19.36■□□□□ 0.69
Smarcc1P97496 Gm37277-201ENSMUST00000194052 1111 ntBASIC19.36■□□□□ 0.69
Smarcc1P97496 Gm43438-201ENSMUST00000198133 379 ntBASIC19.36■□□□□ 0.69
Smarcc1P97496 Aprt-209ENSMUST00000213062 560 ntTSL 2 BASIC19.36■□□□□ 0.69
Smarcc1P97496 Erp29-201ENSMUST00000052590 1123 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Smarcc1P97496 Adgrb2-204ENSMUST00000106015 4982 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Smarcc1P97496 Ppp2r5e-201ENSMUST00000021447 4810 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Smarcc1P97496 Adrb2-201ENSMUST00000053640 2143 ntAPPRIS P1 BASIC19.36■□□□□ 0.69
Smarcc1P97496 Large1-204ENSMUST00000212459 4746 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Smarcc1P97496 Gm26580-201ENSMUST00000181002 2095 ntTSL 5 BASIC19.36■□□□□ 0.69
Smarcc1P97496 Gmppa-201ENSMUST00000037796 1539 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Smarcc1P97496 Aarsd1-201ENSMUST00000070395 1516 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Smarcc1P97496 Rnf13-205ENSMUST00000198214 2027 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Smarcc1P97496 A130048G24Rik-201ENSMUST00000193052 2750 ntBASIC19.35■□□□□ 0.69
Smarcc1P97496 AC115863.1-201ENSMUST00000214815 1813 ntBASIC19.35■□□□□ 0.69
Smarcc1P97496 Cd2bp2-201ENSMUST00000035771 1309 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Smarcc1P97496 6430573F11Rik-202ENSMUST00000135373 2573 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Smarcc1P97496 Tex22-202ENSMUST00000109729 735 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Smarcc1P97496 Gm11424-201ENSMUST00000121929 829 ntBASIC19.35■□□□□ 0.69
Smarcc1P97496 Gm15458-201ENSMUST00000156950 709 ntTSL 5 BASIC19.35■□□□□ 0.69
Smarcc1P97496 Gm5866-201ENSMUST00000177881 973 ntBASIC19.35■□□□□ 0.69
Smarcc1P97496 Gm5914-202ENSMUST00000182863 375 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Smarcc1P97496 Ndufs6-204ENSMUST00000223293 757 ntTSL 2 BASIC19.35■□□□□ 0.69
Smarcc1P97496 AC130669.1-201ENSMUST00000228537 1672 ntBASIC19.35■□□□□ 0.69
Smarcc1P97496 Snn-201ENSMUST00000089011 2902 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Smarcc1P97496 Dctd-201ENSMUST00000033966 2072 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Smarcc1P97496 6030419C18Rik-202ENSMUST00000216294 1601 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Smarcc1P97496 Tprn-201ENSMUST00000114336 2787 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Smarcc1P97496 Gm5096-201ENSMUST00000091776 1858 ntAPPRIS P1 BASIC19.35■□□□□ 0.69
Smarcc1P97496 Scly-201ENSMUST00000027532 2202 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Smarcc1P97496 Rbfox2-206ENSMUST00000227314 1810 ntBASIC19.35■□□□□ 0.69
Smarcc1P97496 Slc6a8-204ENSMUST00000114467 2509 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Smarcc1P97496 Rnf146-202ENSMUST00000160144 4323 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Smarcc1P97496 Vsig10l-204ENSMUST00000203769 2473 ntAPPRIS P2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Smarcc1P97496 Bcar1-201ENSMUST00000166232 3142 ntAPPRIS P3 TSL 1 (best) BASIC19.34■□□□□ 0.69
Smarcc1P97496 Pqlc3-208ENSMUST00000222203 1706 ntTSL 5 BASIC19.34■□□□□ 0.69
Smarcc1P97496 Osr2-201ENSMUST00000022952 1724 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Smarcc1P97496 Coq6-203ENSMUST00000110278 1354 ntAPPRIS ALT2 TSL 5 BASIC19.34■□□□□ 0.69
Smarcc1P97496 Plppr2-203ENSMUST00000190387 2608 ntAPPRIS P2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Smarcc1P97496 A530084C06Rik-201ENSMUST00000170573 3200 ntAPPRIS P1 BASIC19.34■□□□□ 0.69
Smarcc1P97496 Park7-204ENSMUST00000105675 882 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
Smarcc1P97496 Lcn6-202ENSMUST00000114197 635 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Smarcc1P97496 Gm15747-202ENSMUST00000151096 524 ntTSL 3 BASIC19.34■□□□□ 0.69
Smarcc1P97496 Gm34964-201ENSMUST00000207398 417 ntTSL 5 BASIC19.34■□□□□ 0.69
Smarcc1P97496 Rhbdl2-201ENSMUST00000053202 1217 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
Smarcc1P97496 Bcs1l-201ENSMUST00000027358 1890 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Smarcc1P97496 Mettl7a1-201ENSMUST00000067752 1883 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Smarcc1P97496 Tmem94-202ENSMUST00000103033 5238 ntAPPRIS P2 TSL 2 BASIC19.34■□□□□ 0.69
Smarcc1P97496 Lonrf1-201ENSMUST00000065297 3930 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
Smarcc1P97496 Col11a2-203ENSMUST00000114255 5722 ntAPPRIS ALT2 TSL 5 BASIC19.34■□□□□ 0.69
Smarcc1P97496 Zfp821-203ENSMUST00000212000 2081 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Smarcc1P97496 Dhodh-201ENSMUST00000123605 2039 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Smarcc1P97496 Pcbp3-206ENSMUST00000168465 1748 ntAPPRIS P3 TSL 5 BASIC19.34■□□□□ 0.69
Smarcc1P97496 Mtfp1-201ENSMUST00000004868 1411 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Smarcc1P97496 Adam33-201ENSMUST00000052104 2795 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.69
Smarcc1P97496 Rb1-201ENSMUST00000022701 4656 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Smarcc1P97496 Gdpd2-202ENSMUST00000113744 2427 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Smarcc1P97496 Gnpda2-202ENSMUST00000120789 1594 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
Smarcc1P97496 Nosip-202ENSMUST00000107829 972 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.68
Smarcc1P97496 Gm6973-201ENSMUST00000117080 721 ntBASIC19.33■□□□□ 0.68
Smarcc1P97496 Gm13223-201ENSMUST00000118609 747 ntBASIC19.33■□□□□ 0.68
Smarcc1P97496 1700021F05Rik-202ENSMUST00000147196 860 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Smarcc1P97496 Bricd5-202ENSMUST00000164508 701 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Smarcc1P97496 Irs3-202ENSMUST00000196511 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.68
Smarcc1P97496 Gm15406-202ENSMUST00000202229 767 ntTSL 2 BASIC19.33■□□□□ 0.68
Smarcc1P97496 AC166341.4-201ENSMUST00000220625 123 ntBASIC19.33■□□□□ 0.68
Smarcc1P97496 Atad3aos-201ENSMUST00000067628 971 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Smarcc1P97496 G0s2-201ENSMUST00000009777 871 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Smarcc1P97496 Bend6-204ENSMUST00000129464 1750 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Smarcc1P97496 Gm7292-201ENSMUST00000194706 2527 ntBASIC19.33■□□□□ 0.68
Smarcc1P97496 Taf6l-206ENSMUST00000176610 2203 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Smarcc1P97496 Stk11-202ENSMUST00000105370 1474 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Smarcc1P97496 Trappc2-203ENSMUST00000116495 1613 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Smarcc1P97496 Neurl1a-202ENSMUST00000111808 4157 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.68
Smarcc1P97496 Sebox-201ENSMUST00000001130 1351 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Retrieved 100 of 76,532 protein–RNA pairs in 46.5 ms