Protein–RNA interactions for Protein: P97334

Nkx2-3, Homeobox protein Nkx-2.3, mousemouse

Predictions only

Length 362 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-3P97334 Rgl3-201ENSMUST00000045726 2543 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Nkx2-3P97334 1600020E01Rik-207ENSMUST00000204738 1997 ntTSL 5 BASIC19.44■□□□□ 0.7
Nkx2-3P97334 Vrk3-201ENSMUST00000002275 1969 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Nkx2-3P97334 Prkcb-201ENSMUST00000064921 2557 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Nkx2-3P97334 Nfya-206ENSMUST00000160319 1407 ntTSL 5 BASIC19.44■□□□□ 0.7
Nkx2-3P97334 4933436I20Rik-201ENSMUST00000189405 1434 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Nkx2-3P97334 1810013L24Rik-201ENSMUST00000023150 4066 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Nkx2-3P97334 Ube4b-202ENSMUST00000103212 5626 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Nkx2-3P97334 Rps13-ps4-201ENSMUST00000117927 456 ntBASIC19.44■□□□□ 0.7
Nkx2-3P97334 Rps13-ps5-201ENSMUST00000117939 456 ntBASIC19.44■□□□□ 0.7
Nkx2-3P97334 Gm15483-201ENSMUST00000120338 456 ntBASIC19.44■□□□□ 0.7
Nkx2-3P97334 Tm9sf1-203ENSMUST00000121791 2148 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
Nkx2-3P97334 Cebpzos-202ENSMUST00000180077 602 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Nkx2-3P97334 Otub1-201ENSMUST00000025679 1713 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Nkx2-3P97334 Rft1-201ENSMUST00000064230 2387 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Nkx2-3P97334 Plppr5-202ENSMUST00000106473 4294 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Nkx2-3P97334 Rab17-204ENSMUST00000131428 1557 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Nkx2-3P97334 Mettl22-201ENSMUST00000046470 1825 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Nkx2-3P97334 Phf7-201ENSMUST00000022459 2084 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Nkx2-3P97334 Sox14-201ENSMUST00000054819 2065 ntAPPRIS P1 BASIC19.44■□□□□ 0.7
Nkx2-3P97334 Pcolce-201ENSMUST00000031731 1626 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Nkx2-3P97334 Atf6b-202ENSMUST00000173984 2315 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
Nkx2-3P97334 Slc7a5-201ENSMUST00000045557 3517 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Nkx2-3P97334 Wdr86-201ENSMUST00000068693 2364 ntAPPRIS P1 TSL 2 BASIC19.43■□□□□ 0.7
Nkx2-3P97334 Cpne6-203ENSMUST00000165262 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Nkx2-3P97334 Gm37166-201ENSMUST00000195473 2474 ntBASIC19.43■□□□□ 0.7
Nkx2-3P97334 Lad1-201ENSMUST00000038760 2993 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Nkx2-3P97334 Ddx50-201ENSMUST00000020270 2535 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Nkx2-3P97334 Mkrn3-201ENSMUST00000094340 2547 ntAPPRIS P1 BASIC19.43■□□□□ 0.7
Nkx2-3P97334 Slc35a1-201ENSMUST00000029970 2039 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Nkx2-3P97334 Pdhb-201ENSMUST00000022268 1513 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Nkx2-3P97334 Tex22-202ENSMUST00000109729 735 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Nkx2-3P97334 2310061I04Rik-204ENSMUST00000148721 1293 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
Nkx2-3P97334 Olfr324-201ENSMUST00000054683 1122 ntAPPRIS P2 BASIC19.43■□□□□ 0.7
Nkx2-3P97334 Immp2l-201ENSMUST00000080160 239 ntTSL 3 BASIC19.43■□□□□ 0.7
Nkx2-3P97334 Gm6594-201ENSMUST00000097278 288 ntAPPRIS P1 BASIC19.43■□□□□ 0.7
Nkx2-3P97334 4930429H19Rik-201ENSMUST00000205260 1818 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Nkx2-3P97334 Ccdc84-202ENSMUST00000213813 2675 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Nkx2-3P97334 Tes-202ENSMUST00000115467 2440 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Nkx2-3P97334 Ankrd17-214ENSMUST00000218526 4938 ntTSL 5 BASIC19.43■□□□□ 0.7
Nkx2-3P97334 Gyg-203ENSMUST00000178328 1698 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Nkx2-3P97334 Gm45277-201ENSMUST00000210549 1695 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Nkx2-3P97334 Cacul1-203ENSMUST00000166712 5700 ntAPPRIS ALT2 TSL 5 BASIC19.42■□□□□ 0.7
Nkx2-3P97334 Gm6588-201ENSMUST00000100882 2313 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
Nkx2-3P97334 Adamts18-201ENSMUST00000093113 5642 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Nkx2-3P97334 Brwd3-202ENSMUST00000101283 1066 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Nkx2-3P97334 Slpi-201ENSMUST00000109367 876 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Nkx2-3P97334 Gm13223-201ENSMUST00000118609 747 ntBASIC19.42■□□□□ 0.7
Nkx2-3P97334 Haghl-207ENSMUST00000140738 1194 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Nkx2-3P97334 1700021F05Rik-202ENSMUST00000147196 860 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Nkx2-3P97334 Tspan32-211ENSMUST00000207211 1220 ntTSL 5 BASIC19.42■□□□□ 0.7
Nkx2-3P97334 Ndufs6-203ENSMUST00000222930 512 ntTSL 3 BASIC19.42■□□□□ 0.7
Nkx2-3P97334 Gzma-201ENSMUST00000023897 878 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Nkx2-3P97334 Dnal1-201ENSMUST00000046340 790 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Nkx2-3P97334 G0s2-201ENSMUST00000009777 871 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Nkx2-3P97334 G430095P16Rik-201ENSMUST00000098571 721 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Nkx2-3P97334 Lonrf1-201ENSMUST00000065297 3930 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
Nkx2-3P97334 Wfikkn1-201ENSMUST00000095487 1981 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Nkx2-3P97334 Renbp-201ENSMUST00000114379 1318 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Nkx2-3P97334 Pnpt1-201ENSMUST00000020756 2707 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Nkx2-3P97334 Efcab14-204ENSMUST00000106525 2792 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Nkx2-3P97334 Kif22-201ENSMUST00000032915 2115 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Nkx2-3P97334 Epor-201ENSMUST00000006397 1761 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Nkx2-3P97334 Usp27x-201ENSMUST00000115744 3240 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
Nkx2-3P97334 Tulp2-205ENSMUST00000107762 1883 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Nkx2-3P97334 Slc22a3-201ENSMUST00000024595 3501 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Nkx2-3P97334 Gprin1-202ENSMUST00000135343 4248 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Nkx2-3P97334 Simc1-201ENSMUST00000118072 2116 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
Nkx2-3P97334 Gm17399-201ENSMUST00000181824 1181 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Nkx2-3P97334 Gm7774-201ENSMUST00000200064 533 ntBASIC19.41■□□□□ 0.7
Nkx2-3P97334 Cd3g-201ENSMUST00000002101 1023 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Nkx2-3P97334 Tomm20l-201ENSMUST00000021482 578 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Nkx2-3P97334 AC164567.1-201ENSMUST00000219185 960 ntBASIC19.41■□□□□ 0.7
Nkx2-3P97334 Smdt1-201ENSMUST00000023086 705 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Nkx2-3P97334 Hnrnpll-205ENSMUST00000184635 3009 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Nkx2-3P97334 Pigl-201ENSMUST00000014389 2174 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Nkx2-3P97334 Rfc3-201ENSMUST00000038131 1317 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Nkx2-3P97334 Unc5b-201ENSMUST00000077925 5869 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Nkx2-3P97334 P3h1-201ENSMUST00000030393 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Nkx2-3P97334 Srpx-203ENSMUST00000115544 1865 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Nkx2-3P97334 Sh2b1-202ENSMUST00000205340 3366 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Nkx2-3P97334 Sftpb-204ENSMUST00000183018 1490 ntAPPRIS P2 TSL 5 BASIC19.41■□□□□ 0.7
Nkx2-3P97334 Letm2-208ENSMUST00000210616 2974 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Nkx2-3P97334 Tcf3-203ENSMUST00000105339 2096 ntAPPRIS ALT2 TSL 5 BASIC19.4■□□□□ 0.7
Nkx2-3P97334 Hap1-201ENSMUST00000103124 2120 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
Nkx2-3P97334 Lat2-201ENSMUST00000036362 1637 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Nkx2-3P97334 Gm29208-203ENSMUST00000213687 2219 ntTSL 5 BASIC19.4■□□□□ 0.7
Nkx2-3P97334 Efcab8-203ENSMUST00000175856 1703 ntAPPRIS ALT2 TSL 2 BASIC19.4■□□□□ 0.7
Nkx2-3P97334 Osr2-201ENSMUST00000022952 1724 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Nkx2-3P97334 Apeh-206ENSMUST00000193254 2518 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Nkx2-3P97334 Foxp4-203ENSMUST00000113263 3156 ntAPPRIS ALT2 TSL 5 BASIC19.4■□□□□ 0.7
Nkx2-3P97334 Gm28050-201ENSMUST00000124394 449 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Nkx2-3P97334 Gm11505-201ENSMUST00000130442 737 ntTSL 3 BASIC19.4■□□□□ 0.7
Nkx2-3P97334 Gm12981-201ENSMUST00000131733 622 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Nkx2-3P97334 Gm16026-204ENSMUST00000162652 683 ntBASIC19.4■□□□□ 0.7
Nkx2-3P97334 Mir7023-201ENSMUST00000185093 64 ntBASIC19.4■□□□□ 0.7
Nkx2-3P97334 Snx17-201ENSMUST00000031029 2018 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Nkx2-3P97334 Foxa3-201ENSMUST00000036018 2037 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Nkx2-3P97334 A4galt-202ENSMUST00000164614 2128 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Nkx2-3P97334 Phf21b-203ENSMUST00000159939 3639 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Retrieved 100 of 76,532 protein–RNA pairs in 18.8 ms