Protein–RNA interactions for Protein: P86449

Trim43c, Tripartite motif-containing protein 43C, mousemouse

Predictions only

Length 446 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim43cP86449 Strn4-202ENSMUST00000108495 3082 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Trim43cP86449 Hps1-201ENSMUST00000026194 2647 ntAPPRIS P3 TSL 5 BASIC16.88■□□□□ 0.29
Trim43cP86449 Zpbp-201ENSMUST00000020413 4248 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Trim43cP86449 Foxp4-202ENSMUST00000113262 3198 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Trim43cP86449 Gramd4-204ENSMUST00000138134 4292 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Trim43cP86449 Coch-202ENSMUST00000164782 2681 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Trim43cP86449 Sphk1-204ENSMUST00000106386 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Trim43cP86449 Gm28372-201ENSMUST00000188900 1876 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
Trim43cP86449 Arhgef2-202ENSMUST00000107510 4390 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Trim43cP86449 Fdps-203ENSMUST00000196709 1382 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
Trim43cP86449 Dmkn-203ENSMUST00000085688 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Trim43cP86449 Tacc1-201ENSMUST00000084030 7788 ntAPPRIS P4 TSL 1 (best) BASIC16.87■□□□□ 0.29
Trim43cP86449 A430035B10Rik-204ENSMUST00000148063 2010 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Trim43cP86449 Bcr-201ENSMUST00000164107 6839 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Trim43cP86449 Cfap69-205ENSMUST00000135252 2188 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Trim43cP86449 Fam69c-201ENSMUST00000052501 2153 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Trim43cP86449 Gm10505-201ENSMUST00000151398 1587 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Trim43cP86449 Sirt5-203ENSMUST00000220576 1579 ntTSL 5 BASIC16.87■□□□□ 0.29
Trim43cP86449 Nfs1-202ENSMUST00000109600 709 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Trim43cP86449 Gm7862-201ENSMUST00000121461 292 ntBASIC16.87■□□□□ 0.29
Trim43cP86449 Gm16295-201ENSMUST00000139512 643 ntTSL 3 BASIC16.87■□□□□ 0.29
Trim43cP86449 Dgcr6-208ENSMUST00000153123 920 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Trim43cP86449 1700023H06Rik-201ENSMUST00000161006 1044 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Trim43cP86449 Coa3-201ENSMUST00000017332 886 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Trim43cP86449 Fuz-206ENSMUST00000207485 1140 ntAPPRIS ALT1 TSL 5 BASIC16.87■□□□□ 0.29
Trim43cP86449 Rps4l-201ENSMUST00000071745 943 ntBASIC16.87■□□□□ 0.29
Trim43cP86449 Sdhc-201ENSMUST00000081560 815 ntTSL 3 BASIC16.87■□□□□ 0.29
Trim43cP86449 Rabggta-205ENSMUST00000227061 2882 ntAPPRIS P1 BASIC16.87■□□□□ 0.29
Trim43cP86449 Cuedc2-202ENSMUST00000167861 1941 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
Trim43cP86449 Fgfr4-201ENSMUST00000005452 3324 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Trim43cP86449 Fam199x-201ENSMUST00000047852 8299 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Trim43cP86449 Ankrd50-202ENSMUST00000120875 4945 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Trim43cP86449 Podn-203ENSMUST00000106709 3170 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Trim43cP86449 Dsg2-202ENSMUST00000120102 3590 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Trim43cP86449 Ank1-209ENSMUST00000121802 8218 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Trim43cP86449 Galt-202ENSMUST00000108038 1859 ntAPPRIS ALT2 TSL 2 BASIC16.86■□□□□ 0.29
Trim43cP86449 Fam174b-201ENSMUST00000107456 2683 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Trim43cP86449 Fam161a-205ENSMUST00000172602 1935 ntAPPRIS P1 TSL 2 BASIC16.86■□□□□ 0.29
Trim43cP86449 Col18a1-202ENSMUST00000081654 5063 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Trim43cP86449 Tmco1-204ENSMUST00000195015 1573 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Trim43cP86449 Gss-201ENSMUST00000079691 1963 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Trim43cP86449 Gtdc1-202ENSMUST00000100127 2422 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Trim43cP86449 Rnf207-201ENSMUST00000076183 2466 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Trim43cP86449 Sybu-203ENSMUST00000110269 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Trim43cP86449 Gyg-203ENSMUST00000178328 1698 ntAPPRIS P2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Trim43cP86449 Alpl-201ENSMUST00000030551 2522 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Trim43cP86449 Psmc4-206ENSMUST00000140053 1244 ntTSL 5 BASIC16.86■□□□□ 0.29
Trim43cP86449 Slc19a2-204ENSMUST00000169394 894 ntTSL 5 BASIC16.86■□□□□ 0.29
Trim43cP86449 Gm4189-202ENSMUST00000174167 367 ntTSL 3 BASIC16.86■□□□□ 0.29
Trim43cP86449 Gm21887-203ENSMUST00000180251 531 ntAPPRIS P5 TSL 5 BASIC16.86■□□□□ 0.29
Trim43cP86449 Abhd18-206ENSMUST00000203650 797 ntTSL 5 BASIC16.86■□□□□ 0.29
Trim43cP86449 Ccdc182-201ENSMUST00000037268 1204 ntAPPRIS P1 BASIC16.86■□□□□ 0.29
Trim43cP86449 Ephx4-201ENSMUST00000049146 1279 ntAPPRIS P1 TSL 2 BASIC16.86■□□□□ 0.29
Trim43cP86449 Med26-201ENSMUST00000058534 2997 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Trim43cP86449 Dnajc3-201ENSMUST00000022734 5141 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Trim43cP86449 Ccdc115-201ENSMUST00000042493 1705 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Trim43cP86449 Ttbk1-201ENSMUST00000047034 6959 ntAPPRIS P2 TSL 5 BASIC16.86■□□□□ 0.29
Trim43cP86449 Ggn-204ENSMUST00000208330 2205 ntAPPRIS ALT2 TSL 5 BASIC16.86■□□□□ 0.29
Trim43cP86449 Adipor1-201ENSMUST00000027727 3123 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Trim43cP86449 Hacd3-201ENSMUST00000036615 2709 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Trim43cP86449 Ralb-201ENSMUST00000004565 2289 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Trim43cP86449 Gfm2-211ENSMUST00000161913 1829 ntTSL 2 BASIC16.86■□□□□ 0.29
Trim43cP86449 Nrip2-202ENSMUST00000120405 1468 ntTSL 2 BASIC16.86■□□□□ 0.29
Trim43cP86449 Ablim2-202ENSMUST00000101280 3042 ntTSL 5 BASIC16.86■□□□□ 0.29
Trim43cP86449 Dmkn-202ENSMUST00000054427 2034 ntAPPRIS ALT2 TSL 5 BASIC16.86■□□□□ 0.29
Trim43cP86449 Lypd1-205ENSMUST00000162899 1511 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Trim43cP86449 Majin-202ENSMUST00000113528 1562 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Trim43cP86449 Papolb-201ENSMUST00000099400 4239 ntAPPRIS P1 BASIC16.85■□□□□ 0.29
Trim43cP86449 Col13a1-205ENSMUST00000105454 3162 ntAPPRIS P2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Trim43cP86449 Spire2-202ENSMUST00000212404 2158 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Trim43cP86449 Espn-212ENSMUST00000105658 2815 ntAPPRIS ALT2 TSL 5 BASIC16.85■□□□□ 0.29
Trim43cP86449 Trhde-201ENSMUST00000061632 5714 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Trim43cP86449 Tmem81-202ENSMUST00000188789 1751 ntAPPRIS P1 BASIC16.85■□□□□ 0.29
Trim43cP86449 Hoxd12-201ENSMUST00000001878 2534 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Trim43cP86449 Scml4-203ENSMUST00000105495 1033 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Trim43cP86449 Tsacc-202ENSMUST00000107556 584 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Trim43cP86449 1700020A23Rik-202ENSMUST00000110281 521 ntAPPRIS P1 TSL 3 BASIC16.85■□□□□ 0.29
Trim43cP86449 Tmem255b-201ENSMUST00000167071 1138 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Trim43cP86449 Atg101-201ENSMUST00000048393 1230 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Trim43cP86449 Mtus2-201ENSMUST00000071878 1211 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Trim43cP86449 Zmym3-206ENSMUST00000120107 5882 ntAPPRIS ALT2 TSL 5 BASIC16.85■□□□□ 0.29
Trim43cP86449 Ptprt-201ENSMUST00000109441 6623 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Trim43cP86449 4930528D03Rik-201ENSMUST00000181528 1339 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Trim43cP86449 Tfap2a-203ENSMUST00000223869 2037 ntBASIC16.85■□□□□ 0.29
Trim43cP86449 Rffl-202ENSMUST00000071152 3633 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Trim43cP86449 Slc9a6-202ENSMUST00000114784 4449 ntTSL 5 BASIC16.85■□□□□ 0.29
Trim43cP86449 Disp3-201ENSMUST00000047720 5282 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
Trim43cP86449 Fbln1-202ENSMUST00000109432 2273 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Trim43cP86449 Iqcb1-201ENSMUST00000023535 2257 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Trim43cP86449 1700051A21Rik-201ENSMUST00000147937 1516 ntTSL 5 BASIC16.85■□□□□ 0.29
Trim43cP86449 Tead4-201ENSMUST00000006311 3076 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Trim43cP86449 Ttll5-204ENSMUST00000110220 2655 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Trim43cP86449 Gm26608-201ENSMUST00000180740 1954 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Trim43cP86449 Arhgef9-219ENSMUST00000199920 1976 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
Trim43cP86449 Wipi1-201ENSMUST00000047186 3338 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Trim43cP86449 Pgm1-201ENSMUST00000087324 2369 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Trim43cP86449 Park7-203ENSMUST00000105674 937 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
Trim43cP86449 Gm13403-202ENSMUST00000134271 674 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Trim43cP86449 Tmem176a-202ENSMUST00000168406 1086 ntAPPRIS P1 TSL 3 BASIC16.84■□□□□ 0.29
Trim43cP86449 Gm6376-201ENSMUST00000209407 580 ntBASIC16.84■□□□□ 0.29
Retrieved 100 of 76,532 protein–RNA pairs in 31.5 ms