Protein–RNA interactions for Protein: P79621

Ciita, MHC class II transactivator, mousemouse

Predictions only

Length 1,155 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CiitaP79621 Acbd5-206ENSMUST00000155602 1714 ntAPPRIS ALT2 TSL 2 BASIC16.81■□□□□ 0.28
CiitaP79621 Gm5184-201ENSMUST00000220417 1702 ntBASIC16.81■□□□□ 0.28
CiitaP79621 Anapc5-201ENSMUST00000086216 2760 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
CiitaP79621 H2-K1-201ENSMUST00000025181 1605 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
CiitaP79621 Disp3-201ENSMUST00000047720 5282 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
CiitaP79621 Dbx1-201ENSMUST00000032717 2091 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CiitaP79621 H2-T23-201ENSMUST00000102678 1472 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CiitaP79621 Nkapl-201ENSMUST00000068235 1463 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
CiitaP79621 Zic5-201ENSMUST00000039118 4767 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CiitaP79621 Fgfr1-214ENSMUST00000178276 4741 ntTSL 5 BASIC16.8■□□□□ 0.28
CiitaP79621 A230060F14Rik-202ENSMUST00000190739 1889 ntBASIC16.8■□□□□ 0.28
CiitaP79621 Ntng1-203ENSMUST00000106570 1386 ntTSL 5 BASIC16.8■□□□□ 0.28
CiitaP79621 Dhfr-201ENSMUST00000022218 5347 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CiitaP79621 Echdc2-201ENSMUST00000052999 1307 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CiitaP79621 Actr3-202ENSMUST00000178474 2565 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CiitaP79621 Dlk1-203ENSMUST00000109842 1129 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
CiitaP79621 Tsen15-205ENSMUST00000162371 431 ntTSL 5 BASIC16.8■□□□□ 0.28
CiitaP79621 Gm7229-201ENSMUST00000214719 1007 ntBASIC16.8■□□□□ 0.28
CiitaP79621 Tspan18-201ENSMUST00000028646 1203 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CiitaP79621 Anapc15-202ENSMUST00000035395 836 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
CiitaP79621 Eda-202ENSMUST00000113775 5088 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
CiitaP79621 Nodal-201ENSMUST00000049339 2095 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CiitaP79621 Nedd4l-202ENSMUST00000163516 8163 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
CiitaP79621 Cyp2d10-201ENSMUST00000072776 1647 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CiitaP79621 Haspin-201ENSMUST00000052140 2810 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
CiitaP79621 Tgfb2-201ENSMUST00000045288 5116 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CiitaP79621 Mier2-203ENSMUST00000165028 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
CiitaP79621 4933426K07Rik-201ENSMUST00000143009 1548 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
CiitaP79621 Pdhb-201ENSMUST00000022268 1513 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CiitaP79621 Ggnbp2-203ENSMUST00000108081 3034 ntAPPRIS P2 TSL 5 BASIC16.8■□□□□ 0.28
CiitaP79621 2810410L24Rik-202ENSMUST00000155681 2615 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
CiitaP79621 Zkscan3-204ENSMUST00000117721 5788 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
CiitaP79621 Shisa7-201ENSMUST00000066041 6006 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
CiitaP79621 Pcdh1-203ENSMUST00000160721 5416 ntTSL 5 BASIC16.79■□□□□ 0.28
CiitaP79621 Zdhhc2-201ENSMUST00000049389 3381 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CiitaP79621 1700029J07Rik-202ENSMUST00000098786 1340 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CiitaP79621 Cnbp-202ENSMUST00000113617 952 ntTSL 5 BASIC16.79■□□□□ 0.28
CiitaP79621 Gm25911-201ENSMUST00000157621 56 ntBASIC16.79■□□□□ 0.28
CiitaP79621 Sirpa-213ENSMUST00000163034 677 ntTSL 3 BASIC16.79■□□□□ 0.28
CiitaP79621 Fau-202ENSMUST00000178310 571 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CiitaP79621 Cmtm3-204ENSMUST00000212081 850 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
CiitaP79621 Ado-201ENSMUST00000075686 4445 ntAPPRIS P1 BASIC16.79■□□□□ 0.28
CiitaP79621 Lck-202ENSMUST00000102596 2111 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CiitaP79621 Tes-202ENSMUST00000115467 2440 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CiitaP79621 Rhot1-201ENSMUST00000017831 3029 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
CiitaP79621 Crebl2-201ENSMUST00000046303 3629 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CiitaP79621 Bicd2-201ENSMUST00000048544 6309 ntAPPRIS P4 TSL 1 (best) BASIC16.79■□□□□ 0.28
CiitaP79621 Myef2-201ENSMUST00000067780 2999 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
CiitaP79621 Ccdc84-202ENSMUST00000213813 2675 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
CiitaP79621 Ccdc43-201ENSMUST00000092569 2366 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
CiitaP79621 Gtf2b-201ENSMUST00000029938 1455 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CiitaP79621 Fbxl19-204ENSMUST00000188580 2601 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
CiitaP79621 Irak1-201ENSMUST00000033769 2890 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
CiitaP79621 Mms22l-202ENSMUST00000108222 4478 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
CiitaP79621 Matk-203ENSMUST00000119547 1916 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
CiitaP79621 Dars-201ENSMUST00000027602 2175 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CiitaP79621 Sirt4-202ENSMUST00000112067 1645 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CiitaP79621 Rnf168-203ENSMUST00000171474 4460 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
CiitaP79621 Trhde-201ENSMUST00000061632 5714 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CiitaP79621 Rhox2h-201ENSMUST00000115162 779 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CiitaP79621 Gm11453-201ENSMUST00000117318 1007 ntBASIC16.78■□□□□ 0.28
CiitaP79621 Rps15-ps2-201ENSMUST00000121788 438 ntBASIC16.78■□□□□ 0.28
CiitaP79621 Fhad1os2-201ENSMUST00000152351 945 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
CiitaP79621 Mir3113-201ENSMUST00000175478 76 ntBASIC16.78■□□□□ 0.28
CiitaP79621 CT943659.1-201ENSMUST00000215459 326 ntBASIC16.78■□□□□ 0.28
CiitaP79621 1700021F07Rik-201ENSMUST00000029023 646 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CiitaP79621 Sfxn5-202ENSMUST00000059034 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
CiitaP79621 Prss48-201ENSMUST00000061343 949 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CiitaP79621 4933415F23Rik-201ENSMUST00000073179 1781 ntAPPRIS P1 BASIC16.78■□□□□ 0.28
CiitaP79621 Apeh-206ENSMUST00000193254 2518 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CiitaP79621 Fosl2-201ENSMUST00000031017 6537 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CiitaP79621 Chgb-201ENSMUST00000028826 2740 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CiitaP79621 Usp32-202ENSMUST00000108075 7053 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
CiitaP79621 Ppm1e-201ENSMUST00000055438 6344 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CiitaP79621 Gm26774-201ENSMUST00000181534 2401 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
CiitaP79621 Cpne6-203ENSMUST00000165262 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CiitaP79621 Mael-202ENSMUST00000194057 1691 ntTSL 5 BASIC16.78■□□□□ 0.28
CiitaP79621 Paqr9-201ENSMUST00000079597 8367 ntAPPRIS P1 BASIC16.78■□□□□ 0.28
CiitaP79621 Zfx-201ENSMUST00000088102 7002 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CiitaP79621 Arhgef11-201ENSMUST00000039476 6776 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CiitaP79621 Lrrtm1-203ENSMUST00000161677 2518 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
CiitaP79621 Slc27a1-207ENSMUST00000212889 2730 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
CiitaP79621 Ranbp9-201ENSMUST00000144326 3371 ntAPPRIS P2 TSL 5 BASIC16.77■□□□□ 0.28
CiitaP79621 Pde5a-204ENSMUST00000200389 7603 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.28
CiitaP79621 Lmna-202ENSMUST00000036252 1536 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
CiitaP79621 Acap3-201ENSMUST00000079031 4301 ntTSL 5 BASIC16.77■□□□□ 0.28
CiitaP79621 Siva1-202ENSMUST00000109755 333 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
CiitaP79621 Thsd7a-202ENSMUST00000119581 5678 ntAPPRIS P2 TSL 5 BASIC16.77■□□□□ 0.28
CiitaP79621 Caln1-203ENSMUST00000111288 9327 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
CiitaP79621 9530068E07Rik-201ENSMUST00000036952 2467 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.27
CiitaP79621 Gfm2-211ENSMUST00000161913 1829 ntTSL 2 BASIC16.77■□□□□ 0.27
CiitaP79621 Nrg3-201ENSMUST00000166968 4011 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.27
CiitaP79621 Fgf2-208ENSMUST00000200585 5973 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.27
CiitaP79621 Hbegf-201ENSMUST00000025363 2373 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
CiitaP79621 Rab17-204ENSMUST00000131428 1557 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
CiitaP79621 Akt2-202ENSMUST00000085917 1392 ntTSL 5 BASIC16.77■□□□□ 0.27
CiitaP79621 Mbnl1-201ENSMUST00000099087 5655 ntAPPRIS P2 TSL 1 (best) BASIC16.76■□□□□ 0.27
CiitaP79621 Flvcr1-201ENSMUST00000085635 4040 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CiitaP79621 Dnajc25-201ENSMUST00000095070 4023 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CiitaP79621 Sh2b1-201ENSMUST00000032978 3393 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
Retrieved 100 of 76,532 protein–RNA pairs in 48.5 ms