Protein–RNA interactions for Protein: P63158

Hmgb1, High mobility group protein B1, mousemouse

Known RBP Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgb1P63158 Etv6-202ENSMUST00000111963 5707 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Hmgb1P63158 Dcaf17-201ENSMUST00000064141 1905 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Hmgb1P63158 Faf1-201ENSMUST00000102724 4468 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Hmgb1P63158 Mis18bp1-202ENSMUST00000124201 717 ntTSL 3 BASIC17.09■□□□□ 0.33
Hmgb1P63158 Gm40977-203ENSMUST00000222324 886 ntTSL 2 BASIC17.09■□□□□ 0.33
Hmgb1P63158 Gm9991-201ENSMUST00000070048 1207 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Hmgb1P63158 Igdcc4-202ENSMUST00000077696 6361 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
Hmgb1P63158 Sumo1-201ENSMUST00000091374 1215 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Hmgb1P63158 Thegl-202ENSMUST00000117880 1641 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Hmgb1P63158 Sigirr-203ENSMUST00000209294 1612 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Hmgb1P63158 Selplg-201ENSMUST00000100874 1855 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Hmgb1P63158 Arhgef9-219ENSMUST00000199920 1976 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
Hmgb1P63158 Phospho2-202ENSMUST00000112266 2194 ntAPPRIS P1 TSL 3 BASIC17.09■□□□□ 0.33
Hmgb1P63158 Asic4-201ENSMUST00000037708 2464 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Hmgb1P63158 Espnl-202ENSMUST00000176156 2886 ntTSL 5 BASIC17.09■□□□□ 0.33
Hmgb1P63158 Ctnna2-205ENSMUST00000161846 4018 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Hmgb1P63158 Lamc1-201ENSMUST00000027752 7622 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Hmgb1P63158 Fubp3-202ENSMUST00000113482 3268 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Hmgb1P63158 Foxl2-201ENSMUST00000051312 3256 ntAPPRIS P1 BASIC17.08■□□□□ 0.33
Hmgb1P63158 Slc5a5-201ENSMUST00000000809 2928 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Hmgb1P63158 Tatdn2-205ENSMUST00000204753 2645 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.33
Hmgb1P63158 Tmem266-201ENSMUST00000034862 2408 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.33
Hmgb1P63158 BC037039-201ENSMUST00000192003 2205 ntBASIC17.08■□□□□ 0.33
Hmgb1P63158 2610011E03Rik-201ENSMUST00000200128 2235 ntBASIC17.08■□□□□ 0.33
Hmgb1P63158 Lck-202ENSMUST00000102596 2111 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Hmgb1P63158 Slc23a3-201ENSMUST00000027405 2059 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Hmgb1P63158 Golim4-201ENSMUST00000038563 5546 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.33
Hmgb1P63158 Sept6-203ENSMUST00000115239 1845 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
Hmgb1P63158 Pdgfa-203ENSMUST00000110896 1363 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
Hmgb1P63158 Akt2-202ENSMUST00000085917 1392 ntTSL 5 BASIC17.08■□□□□ 0.32
Hmgb1P63158 Derl3-201ENSMUST00000009236 1321 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Hmgb1P63158 Tmem208-201ENSMUST00000015000 785 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Hmgb1P63158 Sox13-205ENSMUST00000153799 3693 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Hmgb1P63158 Mapk8ip3-203ENSMUST00000115229 5603 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.32
Hmgb1P63158 Cask-204ENSMUST00000115438 8366 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Hmgb1P63158 Tcf12-201ENSMUST00000034755 4621 ntAPPRIS ALT1 TSL 5 BASIC17.08■□□□□ 0.32
Hmgb1P63158 Entpd6-201ENSMUST00000094467 2540 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Hmgb1P63158 Impdh1-205ENSMUST00000160878 2314 ntTSL 5 BASIC17.08■□□□□ 0.32
Hmgb1P63158 Baz1b-201ENSMUST00000002825 6492 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Hmgb1P63158 Bag4-201ENSMUST00000038498 4876 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Hmgb1P63158 Rdx-201ENSMUST00000000590 4380 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Hmgb1P63158 Mettl22-201ENSMUST00000046470 1825 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Hmgb1P63158 Ddhd1-203ENSMUST00000111828 9802 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Hmgb1P63158 Fam174b-201ENSMUST00000107456 2683 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Hmgb1P63158 Zbtb4-201ENSMUST00000108638 2552 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Hmgb1P63158 Irs2-201ENSMUST00000040514 6323 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Hmgb1P63158 Ube2f-204ENSMUST00000178627 1363 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Hmgb1P63158 Foxp4-202ENSMUST00000113262 3198 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Hmgb1P63158 Dnm1l-203ENSMUST00000115749 4068 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Hmgb1P63158 Dnm1l-202ENSMUST00000096229 4056 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Hmgb1P63158 Adal-203ENSMUST00000110662 1231 ntTSL 5 BASIC17.07■□□□□ 0.32
Hmgb1P63158 Gm12216-201ENSMUST00000117316 1152 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Hmgb1P63158 Chchd2-ps-201ENSMUST00000117487 462 ntBASIC17.07■□□□□ 0.32
Hmgb1P63158 Calu-207ENSMUST00000173216 673 ntTSL 5 BASIC17.07■□□□□ 0.32
Hmgb1P63158 Stum-205ENSMUST00000211561 1063 ntAPPRIS ALT1 TSL 5 BASIC17.07■□□□□ 0.32
Hmgb1P63158 Stx3-208ENSMUST00000211641 1018 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Hmgb1P63158 1700022H01Rik-201ENSMUST00000219142 387 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Hmgb1P63158 Insl3-201ENSMUST00000034261 623 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Hmgb1P63158 Atp5l-201ENSMUST00000043675 544 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Hmgb1P63158 Pdia3-201ENSMUST00000028683 2770 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Hmgb1P63158 Dnase2a-202ENSMUST00000109744 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Hmgb1P63158 Sgta-202ENSMUST00000218208 1964 ntAPPRIS ALT1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Hmgb1P63158 Smarcc1-204ENSMUST00000197984 3538 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Hmgb1P63158 Slc37a4-203ENSMUST00000213388 2344 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Hmgb1P63158 Insc-201ENSMUST00000117543 2170 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
Hmgb1P63158 Fam69c-201ENSMUST00000052501 2153 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Hmgb1P63158 Rtn1-201ENSMUST00000021497 1544 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Hmgb1P63158 Prdm5-201ENSMUST00000031973 1488 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Hmgb1P63158 Tex19.2-201ENSMUST00000039146 2046 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Hmgb1P63158 Slc33a1-203ENSMUST00000161659 2554 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Hmgb1P63158 Pitpnm2-209ENSMUST00000161938 5866 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Hmgb1P63158 Tor1b-201ENSMUST00000028199 3039 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Hmgb1P63158 Zmym3-201ENSMUST00000063577 6057 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Hmgb1P63158 Pgm1-201ENSMUST00000087324 2369 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Hmgb1P63158 Adipor1-202ENSMUST00000112237 3446 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Hmgb1P63158 Apoa4-201ENSMUST00000034585 1815 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Hmgb1P63158 Cables1-202ENSMUST00000171109 3396 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Hmgb1P63158 Cd82-204ENSMUST00000111257 1003 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
Hmgb1P63158 Tfg-202ENSMUST00000121554 716 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
Hmgb1P63158 Gm7616-201ENSMUST00000143112 624 ntTSL 3 BASIC17.06■□□□□ 0.32
Hmgb1P63158 4930428E07Rik-201ENSMUST00000222132 920 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Hmgb1P63158 Npw-201ENSMUST00000095544 638 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Hmgb1P63158 AC131104.1-201ENSMUST00000222118 1739 ntTSL 5 BASIC17.06■□□□□ 0.32
Hmgb1P63158 Myb-203ENSMUST00000188495 3693 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Hmgb1P63158 Gatad2a-203ENSMUST00000177851 5007 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
Hmgb1P63158 Hoxb1-201ENSMUST00000019117 2086 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Hmgb1P63158 Gm45351-201ENSMUST00000210683 2545 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Hmgb1P63158 Diras2-201ENSMUST00000057442 4786 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Hmgb1P63158 Gm13337-201ENSMUST00000119183 1594 ntBASIC17.06■□□□□ 0.32
Hmgb1P63158 Gimap3-201ENSMUST00000038811 1968 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
Hmgb1P63158 Ints10-203ENSMUST00000110241 2322 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Hmgb1P63158 Kif21a-203ENSMUST00000100304 6439 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
Hmgb1P63158 Kif21a-202ENSMUST00000088614 6439 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
Hmgb1P63158 P2ry2-206ENSMUST00000208340 2693 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Hmgb1P63158 Ovca2-201ENSMUST00000071562 2670 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Hmgb1P63158 Slc35e4-202ENSMUST00000109995 3063 ntAPPRIS ALT1 TSL 5 BASIC17.05■□□□□ 0.32
Hmgb1P63158 Slc35e4-201ENSMUST00000051207 3059 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Hmgb1P63158 Apol8-201ENSMUST00000070911 1838 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Hmgb1P63158 Pank3-201ENSMUST00000018990 7376 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Hmgb1P63158 Lrrc32-203ENSMUST00000205956 4576 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 108.4 ms