Protein–RNA interactions for Protein: P63058

Thra, Thyroid hormone receptor alpha, mousemouse

Predictions only

Length 492 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ThraP63058 Naa50-203ENSMUST00000159514 3756 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
ThraP63058 Gm44443-201ENSMUST00000204396 5633 ntBASIC15.71■□□□□ 0.11
ThraP63058 Cdc42ep1-201ENSMUST00000059619 2542 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
ThraP63058 Sik2-201ENSMUST00000041375 3552 ntAPPRIS P2 TSL 1 (best) BASIC15.71■□□□□ 0.11
ThraP63058 B3galt6-201ENSMUST00000052185 3184 ntAPPRIS P1 BASIC15.71■□□□□ 0.11
ThraP63058 Chst14-202ENSMUST00000110837 1991 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
ThraP63058 Cry1-201ENSMUST00000020227 3026 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
ThraP63058 Tekt1-202ENSMUST00000108502 1403 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
ThraP63058 Stk40-201ENSMUST00000094761 3492 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
ThraP63058 Zfp451-201ENSMUST00000019861 3958 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.11
ThraP63058 Tor1aip2-205ENSMUST00000111757 6118 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
ThraP63058 Trmt112-202ENSMUST00000116551 985 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
ThraP63058 Timm23-201ENSMUST00000013845 1173 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
ThraP63058 Nabp2-204ENSMUST00000166608 979 ntTSL 5 BASIC15.71■□□□□ 0.11
ThraP63058 4930477E14Rik-201ENSMUST00000181412 621 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
ThraP63058 5430416N02Rik-202ENSMUST00000181873 626 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
ThraP63058 Jpx-202ENSMUST00000182447 712 ntTSL 3 BASIC15.71■□□□□ 0.11
ThraP63058 Gm5617-201ENSMUST00000048824 531 ntAPPRIS P1 BASIC15.71■□□□□ 0.11
ThraP63058 Ydjc-201ENSMUST00000069064 1297 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
ThraP63058 Irf2bpl-201ENSMUST00000038422 4098 ntAPPRIS P1 BASIC15.71■□□□□ 0.11
ThraP63058 Gusb-203ENSMUST00000111308 2038 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
ThraP63058 Tbc1d1-203ENSMUST00000119756 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
ThraP63058 Crtc3-201ENSMUST00000122255 5115 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
ThraP63058 Rcbtb1-201ENSMUST00000022551 3957 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
ThraP63058 Acsl3-201ENSMUST00000035779 3950 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
ThraP63058 Slc12a5-201ENSMUST00000099092 6028 ntAPPRIS P2 TSL 1 (best) BASIC15.71■□□□□ 0.1
ThraP63058 Dffb-201ENSMUST00000030893 2093 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
ThraP63058 Zkscan17-202ENSMUST00000101150 3771 ntTSL 1 (best) BASIC15.71■□□□□ 0.1
ThraP63058 Ruvbl2-201ENSMUST00000107771 1834 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
ThraP63058 AC154412.1-201ENSMUST00000226540 2786 ntBASIC15.7■□□□□ 0.1
ThraP63058 Lias-202ENSMUST00000122026 1668 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
ThraP63058 Esr1-203ENSMUST00000105589 2612 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
ThraP63058 Col16a1-201ENSMUST00000044565 5206 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
ThraP63058 Dclk2-201ENSMUST00000029719 4012 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
ThraP63058 Ric8b-201ENSMUST00000038523 3069 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
ThraP63058 Mrc2-202ENSMUST00000100335 5795 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
ThraP63058 Ythdc2-201ENSMUST00000037763 7215 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
ThraP63058 Zscan2-201ENSMUST00000044115 2310 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
ThraP63058 Cmtm3-201ENSMUST00000034343 1616 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
ThraP63058 Bud23-201ENSMUST00000071677 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
ThraP63058 Sdhb-201ENSMUST00000010007 1142 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
ThraP63058 Naa10-206ENSMUST00000114391 834 ntTSL 5 BASIC15.7■□□□□ 0.1
ThraP63058 AC148328.1-201ENSMUST00000216448 920 ntTSL 5 BASIC15.7■□□□□ 0.1
ThraP63058 AC138767.1-201ENSMUST00000222661 415 ntBASIC15.7■□□□□ 0.1
ThraP63058 AC114585.2-202ENSMUST00000228094 426 ntBASIC15.7■□□□□ 0.1
ThraP63058 Polr2f-201ENSMUST00000040077 543 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
ThraP63058 Gm10190-201ENSMUST00000086549 324 ntAPPRIS P1 BASIC15.7■□□□□ 0.1
ThraP63058 Pdia3-201ENSMUST00000028683 2770 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
ThraP63058 Slc39a11-201ENSMUST00000042657 2781 ntAPPRIS ALT2 TSL 2 BASIC15.7■□□□□ 0.1
ThraP63058 Arpc1b-211ENSMUST00000196111 1394 ntAPPRIS ALT1 TSL 1 (best) BASIC15.7■□□□□ 0.1
ThraP63058 Gxylt2-201ENSMUST00000032157 7658 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
ThraP63058 Pex1-202ENSMUST00000121291 4555 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
ThraP63058 Cep44-201ENSMUST00000040330 1690 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
ThraP63058 Tsc22d2-201ENSMUST00000099090 9799 ntAPPRIS P3 TSL 3 BASIC15.7■□□□□ 0.1
ThraP63058 Cdkl3-209ENSMUST00000120374 2770 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
ThraP63058 Fnbp1-204ENSMUST00000100208 1859 ntTSL 5 BASIC15.69■□□□□ 0.1
ThraP63058 Klhl33-202ENSMUST00000170855 1422 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
ThraP63058 Gm44729-201ENSMUST00000206759 2052 ntBASIC15.69■□□□□ 0.1
ThraP63058 Slc44a2-210ENSMUST00000217461 3478 ntAPPRIS ALT1 TSL 1 (best) BASIC15.69■□□□□ 0.1
ThraP63058 Ptn-201ENSMUST00000101534 1614 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
ThraP63058 Homer2-206ENSMUST00000207983 1634 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
ThraP63058 Adck1-204ENSMUST00000222695 2253 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
ThraP63058 Tacstd2-201ENSMUST00000058178 1735 ntAPPRIS P1 BASIC15.69■□□□□ 0.1
ThraP63058 Tyro3-201ENSMUST00000028763 3989 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
ThraP63058 Tgfb1i1-205ENSMUST00000165667 1812 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
ThraP63058 Slit1-203ENSMUST00000169141 5673 ntTSL 5 BASIC15.69■□□□□ 0.1
ThraP63058 Anks1-201ENSMUST00000025058 6844 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
ThraP63058 Pcbp4-201ENSMUST00000024260 2035 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
ThraP63058 Mir5131-201ENSMUST00000175426 93 ntBASIC15.69■□□□□ 0.1
ThraP63058 Washc3-203ENSMUST00000182183 838 ntAPPRIS ALT2 TSL 2 BASIC15.69■□□□□ 0.1
ThraP63058 Ten1-201ENSMUST00000021130 902 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
ThraP63058 Methig1-201ENSMUST00000075675 1029 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
ThraP63058 Gm18856-201ENSMUST00000178096 1374 ntBASIC15.69■□□□□ 0.1
ThraP63058 Slc25a2-201ENSMUST00000058635 1369 ntAPPRIS P1 BASIC15.69■□□□□ 0.1
ThraP63058 Amn1-201ENSMUST00000095319 1369 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
ThraP63058 Akap7-203ENSMUST00000100012 2321 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
ThraP63058 Sass6-205ENSMUST00000198311 2404 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
ThraP63058 Sox13-205ENSMUST00000153799 3693 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
ThraP63058 Cxxc5-201ENSMUST00000060722 2271 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
ThraP63058 Arfgap2-202ENSMUST00000080008 3068 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
ThraP63058 Tnip2-203ENSMUST00000114359 1642 ntTSL 5 BASIC15.68■□□□□ 0.1
ThraP63058 Coq6-201ENSMUST00000021661 1602 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
ThraP63058 St8sia5-201ENSMUST00000075290 1841 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
ThraP63058 Wnt5b-202ENSMUST00000118120 2115 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
ThraP63058 Ubash3b-201ENSMUST00000044155 6354 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
ThraP63058 Thop1-201ENSMUST00000005057 2832 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
ThraP63058 Eif4g1-201ENSMUST00000044783 5444 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
ThraP63058 Keap1-201ENSMUST00000049567 3172 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
ThraP63058 Dock1-206ENSMUST00000211593 2589 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
ThraP63058 Il7-203ENSMUST00000192202 2057 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
ThraP63058 Prodh2-201ENSMUST00000058280 1853 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
ThraP63058 Anks1b-219ENSMUST00000182600 1697 ntTSL 5 BASIC15.68■□□□□ 0.1
ThraP63058 Pus1-204ENSMUST00000112426 1389 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
ThraP63058 Gm31774-201ENSMUST00000212910 1366 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
ThraP63058 Ch25h-201ENSMUST00000050562 1350 ntAPPRIS P1 BASIC15.68■□□□□ 0.1
ThraP63058 Rplp2-203ENSMUST00000106004 421 ntAPPRIS P1 TSL 2 BASIC15.68■□□□□ 0.1
ThraP63058 Rhoc-202ENSMUST00000106787 959 ntAPPRIS P1 TSL 2 BASIC15.68■□□□□ 0.1
ThraP63058 Ccl27a-202ENSMUST00000108032 350 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
ThraP63058 Fam107b-203ENSMUST00000115053 688 ntAPPRIS P1 TSL 3 BASIC15.68■□□□□ 0.1
ThraP63058 9430038I01Rik-202ENSMUST00000117404 699 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
Retrieved 100 of 76,532 protein–RNA pairs in 39.2 ms