Protein–RNA interactions for Protein: P62812

Gabra1, Gamma-aminobutyric acid receptor subunit alpha-1, mousemouse

Predictions only

Length 455 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gabra1P62812 Farp2-201ENSMUST00000120301 3937 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Gabra1P62812 Sphk1-204ENSMUST00000106386 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Gabra1P62812 Romo1-202ENSMUST00000109597 550 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Gabra1P62812 Rpl18-204ENSMUST00000209693 535 ntTSL 5 BASIC13.11□□□□□ -0.31
Gabra1P62812 Tomm20-202ENSMUST00000212771 458 ntTSL 2 BASIC13.11□□□□□ -0.31
Gabra1P62812 Uchl1-201ENSMUST00000031131 1177 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Gabra1P62812 Sohlh1-201ENSMUST00000076989 1289 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Gabra1P62812 Specc1-209ENSMUST00000201671 2523 ntTSL 5 BASIC13.11□□□□□ -0.31
Gabra1P62812 Tcf19-203ENSMUST00000161012 1665 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Gabra1P62812 Clec2h-201ENSMUST00000032518 2160 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Gabra1P62812 Plekha4-201ENSMUST00000051810 2660 ntAPPRIS P2 TSL 5 BASIC13.11□□□□□ -0.31
Gabra1P62812 Mrps35-201ENSMUST00000036111 4162 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Gabra1P62812 Gna13-201ENSMUST00000020930 6160 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Gabra1P62812 Dr1-201ENSMUST00000031190 3085 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Gabra1P62812 Fgf15-201ENSMUST00000033389 1810 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Gabra1P62812 Tmx4-201ENSMUST00000038228 5488 ntAPPRIS P2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Gabra1P62812 Fam109b-201ENSMUST00000050349 2745 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Gabra1P62812 Ikzf5-202ENSMUST00000121033 2231 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Gabra1P62812 Kcnq2-217ENSMUST00000149964 8209 ntAPPRIS P2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Gabra1P62812 Nr1h3-202ENSMUST00000111354 1738 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Gabra1P62812 Hnrnpa3-202ENSMUST00000111961 1734 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Gabra1P62812 Prss41-204ENSMUST00000151797 1743 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Gabra1P62812 Scp2-201ENSMUST00000030340 2640 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Gabra1P62812 Agbl5-202ENSMUST00000114700 3296 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Gabra1P62812 Kit-204ENSMUST00000144270 5241 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Gabra1P62812 Kptn-201ENSMUST00000006178 1630 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Gabra1P62812 Kif21a-201ENSMUST00000067205 6307 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Gabra1P62812 Plod2-201ENSMUST00000070522 3649 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
Gabra1P62812 Scrn2-201ENSMUST00000021249 1530 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Gabra1P62812 Rcor1-202ENSMUST00000116388 2720 ntAPPRIS P2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Gabra1P62812 Rpl36al-202ENSMUST00000110619 1276 ntAPPRIS P1 BASIC13.1□□□□□ -0.31
Gabra1P62812 Gm5643-201ENSMUST00000117081 966 ntBASIC13.1□□□□□ -0.31
Gabra1P62812 Tfam-203ENSMUST00000121685 899 ntAPPRIS ALT2 TSL 2 BASIC13.1□□□□□ -0.31
Gabra1P62812 3110082J24Rik-201ENSMUST00000127749 327 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
Gabra1P62812 Pgap3-205ENSMUST00000128897 1264 ntTSL 5 BASIC13.1□□□□□ -0.31
Gabra1P62812 Smim22-201ENSMUST00000178155 429 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
Gabra1P62812 Gm44450-201ENSMUST00000199528 114 ntBASIC13.1□□□□□ -0.31
Gabra1P62812 D030044L04Rik-201ENSMUST00000204220 1291 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Gabra1P62812 AC124601.2-201ENSMUST00000222888 759 ntTSL 2 BASIC13.1□□□□□ -0.31
Gabra1P62812 Angptl8-201ENSMUST00000058777 865 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Gabra1P62812 Ing4-205ENSMUST00000140131 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Gabra1P62812 Elmo2-203ENSMUST00000094329 3466 ntAPPRIS P2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Gabra1P62812 4930474H06Rik-201ENSMUST00000132822 1590 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Gabra1P62812 Fam155a-206ENSMUST00000208933 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Gabra1P62812 Iqcb1-201ENSMUST00000023535 2257 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Gabra1P62812 Sec24a-204ENSMUST00000109097 6581 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
Gabra1P62812 Cdh11-201ENSMUST00000075190 5647 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Gabra1P62812 Ablim3-201ENSMUST00000049378 4532 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Gabra1P62812 Spon2-201ENSMUST00000046186 2045 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Gabra1P62812 Dhodh-209ENSMUST00000143900 1455 ntTSL 5 BASIC13.1□□□□□ -0.31
Gabra1P62812 Cpne1-203ENSMUST00000109608 3492 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Gabra1P62812 Chfr-207ENSMUST00000198633 2623 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Gabra1P62812 Gins2-201ENSMUST00000034278 3900 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Gabra1P62812 Olfr683-202ENSMUST00000209879 3841 ntAPPRIS P1 TSL 5 BASIC13.09□□□□□ -0.31
Gabra1P62812 Mapk8ip3-207ENSMUST00000121723 5410 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Gabra1P62812 Mif4gd-201ENSMUST00000021087 1372 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Gabra1P62812 Klc2-203ENSMUST00000113728 2838 ntTSL 5 BASIC13.09□□□□□ -0.31
Gabra1P62812 Samm50-201ENSMUST00000023071 1673 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Gabra1P62812 Acot3-201ENSMUST00000021653 3431 ntAPPRIS P3 TSL 1 (best) BASIC13.09□□□□□ -0.31
Gabra1P62812 Ulk1-211ENSMUST00000200299 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Gabra1P62812 Traf5-201ENSMUST00000085573 1964 ntAPPRIS P1 TSL 5 BASIC13.09□□□□□ -0.31
Gabra1P62812 Gm21981-201ENSMUST00000143789 2721 ntAPPRIS P1 TSL 5 BASIC13.09□□□□□ -0.31
Gabra1P62812 Plekha1-203ENSMUST00000120441 3777 ntAPPRIS ALT2 TSL 5 BASIC13.09□□□□□ -0.31
Gabra1P62812 Sirpa-203ENSMUST00000103202 3982 ntAPPRIS P3 TSL 1 (best) BASIC13.09□□□□□ -0.31
Gabra1P62812 Epo-203ENSMUST00000111039 706 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Gabra1P62812 Gapdh-202ENSMUST00000117757 1273 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Gabra1P62812 Dnajb3-201ENSMUST00000119972 1051 ntAPPRIS P1 BASIC13.09□□□□□ -0.31
Gabra1P62812 Tsfm-202ENSMUST00000120547 1271 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Gabra1P62812 Gm15690-201ENSMUST00000128728 432 ntTSL 3 BASIC13.09□□□□□ -0.31
Gabra1P62812 Anapc13-203ENSMUST00000188398 727 ntAPPRIS P1 TSL 2 BASIC13.09□□□□□ -0.31
Gabra1P62812 Trmt13-210ENSMUST00000198454 880 ntBASIC13.09□□□□□ -0.31
Gabra1P62812 Sumo3-201ENSMUST00000020501 2630 ntAPPRIS P3 TSL 1 (best) BASIC13.09□□□□□ -0.31
Gabra1P62812 Prkcz-201ENSMUST00000030922 2641 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Gabra1P62812 Hist1h3g-201ENSMUST00000080859 530 ntAPPRIS P1 BASIC13.09□□□□□ -0.31
Gabra1P62812 Med14-202ENSMUST00000096495 6963 ntAPPRIS P2 TSL 5 BASIC13.09□□□□□ -0.31
Gabra1P62812 Ddi2-201ENSMUST00000102484 9553 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Gabra1P62812 Cask-204ENSMUST00000115438 8366 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Gabra1P62812 Rara-203ENSMUST00000107474 2380 ntAPPRIS P1 TSL 5 BASIC13.09□□□□□ -0.31
Gabra1P62812 Camk2g-217ENSMUST00000226630 1937 ntBASIC13.09□□□□□ -0.31
Gabra1P62812 Ddhd1-203ENSMUST00000111828 9802 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Gabra1P62812 Pbx3-201ENSMUST00000040638 2587 ntAPPRIS P3 TSL 1 (best) BASIC13.09□□□□□ -0.31
Gabra1P62812 5033426O07Rik-202ENSMUST00000212635 2110 ntTSL 5 BASIC13.09□□□□□ -0.31
Gabra1P62812 Syngr3-201ENSMUST00000007236 1965 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Gabra1P62812 Sh2b3-204ENSMUST00000122426 2777 ntAPPRIS P3 TSL 1 (best) BASIC13.09□□□□□ -0.31
Gabra1P62812 Gm26840-201ENSMUST00000180784 2980 ntTSL 1 (best) BASIC13.08□□□□□ -0.31
Gabra1P62812 Osbpl8-201ENSMUST00000095310 3622 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.31
Gabra1P62812 Cep63-201ENSMUST00000093791 2696 ntTSL 1 (best) BASIC13.08□□□□□ -0.31
Gabra1P62812 Eif4a2-201ENSMUST00000023599 2208 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.32
Gabra1P62812 Ubn2-201ENSMUST00000039127 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Gabra1P62812 Efcab14-204ENSMUST00000106525 2792 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Gabra1P62812 Suco-201ENSMUST00000048377 6327 ntAPPRIS P2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Gabra1P62812 Gpsm1-203ENSMUST00000078616 3127 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Gabra1P62812 Unc50-203ENSMUST00000118059 1179 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.32
Gabra1P62812 Gm16764-202ENSMUST00000148931 433 ntTSL 5 BASIC13.08□□□□□ -0.32
Gabra1P62812 Gm10698-201ENSMUST00000182663 604 ntBASIC13.08□□□□□ -0.32
Gabra1P62812 Gm37939-201ENSMUST00000192309 447 ntTSL 5 BASIC13.08□□□□□ -0.32
Gabra1P62812 Mob2-206ENSMUST00000211206 2140 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Gabra1P62812 Gm10638-201ENSMUST00000098532 905 ntAPPRIS P1 BASIC13.08□□□□□ -0.32
Gabra1P62812 Zfr2-201ENSMUST00000117798 3349 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.32
Gabra1P62812 Kcnc1-201ENSMUST00000025202 7760 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Retrieved 100 of 76,532 protein–RNA pairs in 26.5 ms