Protein–RNA interactions for Protein: P62069

Usp46, Ubiquitin carboxyl-terminal hydrolase 46, mousemouse

Predictions only

Length 366 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp46P62069 Tbc1d12-201ENSMUST00000037302 4209 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Usp46P62069 Scin-201ENSMUST00000002640 2995 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Usp46P62069 Hnrnpll-201ENSMUST00000061331 3116 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
Usp46P62069 Ppp2r1b-211ENSMUST00000176798 2074 ntAPPRIS ALT2 TSL 5 BASIC16.25■□□□□ 0.19
Usp46P62069 Zfp384-207ENSMUST00000112427 3072 ntAPPRIS P2 TSL 5 BASIC16.25■□□□□ 0.19
Usp46P62069 Rexo1-201ENSMUST00000057910 5250 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Usp46P62069 Ints10-203ENSMUST00000110241 2322 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Usp46P62069 Zfp1-201ENSMUST00000077791 1811 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
Usp46P62069 Tmtc4-204ENSMUST00000126867 2952 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
Usp46P62069 Pde4d-208ENSMUST00000120671 2455 ntTSL 5 BASIC16.24■□□□□ 0.19
Usp46P62069 Grhl2-203ENSMUST00000161405 1996 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Usp46P62069 Ankrd50-202ENSMUST00000120875 4945 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Usp46P62069 Chpf-202ENSMUST00000094818 3065 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Usp46P62069 Svip-201ENSMUST00000098414 3053 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Usp46P62069 Higd1b-202ENSMUST00000107072 497 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
Usp46P62069 Higd1b-203ENSMUST00000107073 530 ntAPPRIS P1 TSL 2 BASIC16.24■□□□□ 0.19
Usp46P62069 Ppil3-202ENSMUST00000114345 1175 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Usp46P62069 Gm11764-201ENSMUST00000120221 623 ntBASIC16.24■□□□□ 0.19
Usp46P62069 Dusp13-208ENSMUST00000183698 1019 ntTSL 5 BASIC16.24■□□□□ 0.19
Usp46P62069 Gm8000-201ENSMUST00000188378 592 ntBASIC16.24■□□□□ 0.19
Usp46P62069 Rpsa-ps1-201ENSMUST00000191040 886 ntBASIC16.24■□□□□ 0.19
Usp46P62069 Gm45167-201ENSMUST00000208007 322 ntBASIC16.24■□□□□ 0.19
Usp46P62069 Higd1b-201ENSMUST00000021302 735 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Usp46P62069 Arl4c-202ENSMUST00000159814 3997 ntAPPRIS P1 BASIC16.24■□□□□ 0.19
Usp46P62069 Penk-201ENSMUST00000070375 1449 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Usp46P62069 Tpd52-205ENSMUST00000120143 6317 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Usp46P62069 Htatsf1-201ENSMUST00000088652 2810 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Usp46P62069 Gm45212-201ENSMUST00000205831 3403 ntBASIC16.24■□□□□ 0.19
Usp46P62069 Tfeb-204ENSMUST00000113288 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Usp46P62069 Esr1-203ENSMUST00000105589 2612 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Usp46P62069 Snx8-201ENSMUST00000031539 2627 ntAPPRIS P2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Usp46P62069 Slc39a11-201ENSMUST00000042657 2781 ntAPPRIS ALT2 TSL 2 BASIC16.24■□□□□ 0.19
Usp46P62069 Ggnbp2-203ENSMUST00000108081 3034 ntAPPRIS P2 TSL 5 BASIC16.24■□□□□ 0.19
Usp46P62069 Zfp553-201ENSMUST00000056232 3043 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Usp46P62069 Tcf3-209ENSMUST00000105345 2950 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
Usp46P62069 Spatc1-201ENSMUST00000074173 1605 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Usp46P62069 Chst5-201ENSMUST00000034430 2182 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Usp46P62069 Jade2-202ENSMUST00000109090 6230 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Usp46P62069 Sigirr-206ENSMUST00000210167 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Usp46P62069 Nrg2-203ENSMUST00000115713 3001 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
Usp46P62069 Ecel1-203ENSMUST00000160810 2898 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Usp46P62069 Tcp1-209ENSMUST00000151287 2446 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Usp46P62069 Gm12260-201ENSMUST00000122447 411 ntBASIC16.23■□□□□ 0.19
Usp46P62069 Gm15655-201ENSMUST00000134649 440 ntTSL 2 BASIC16.23■□□□□ 0.19
Usp46P62069 Psmb1-201ENSMUST00000014913 1036 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Usp46P62069 Gm15492-201ENSMUST00000156734 606 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Usp46P62069 Fam78b-206ENSMUST00000190081 4666 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Usp46P62069 Gm37153-201ENSMUST00000193637 231 ntBASIC16.23■□□□□ 0.19
Usp46P62069 Pabpn1l-202ENSMUST00000212966 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Usp46P62069 AC132104.2-201ENSMUST00000215011 266 ntBASIC16.23■□□□□ 0.19
Usp46P62069 AC122024.2-201ENSMUST00000220086 871 ntBASIC16.23■□□□□ 0.19
Usp46P62069 AC147366.1-201ENSMUST00000227671 852 ntBASIC16.23■□□□□ 0.19
Usp46P62069 Mrpl46-201ENSMUST00000032841 1134 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Usp46P62069 Dnph1-201ENSMUST00000046497 1106 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Usp46P62069 Pfn3-201ENSMUST00000054146 545 ntAPPRIS P1 BASIC16.23■□□□□ 0.19
Usp46P62069 Ankrd23-201ENSMUST00000054665 1964 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Usp46P62069 1700001O22Rik-201ENSMUST00000050003 1672 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Usp46P62069 Hsdl2-201ENSMUST00000030078 2611 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Usp46P62069 Pla2g16-203ENSMUST00000136756 1901 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Usp46P62069 Kifc3-212ENSMUST00000213004 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Usp46P62069 Sesn1-202ENSMUST00000099931 3809 ntAPPRIS ALT1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Usp46P62069 Bend6-204ENSMUST00000129464 1750 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Usp46P62069 March8-201ENSMUST00000079012 4450 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Usp46P62069 Sh2b1-201ENSMUST00000032978 3393 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
Usp46P62069 Inhbc-201ENSMUST00000026472 1859 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Usp46P62069 Mob2-206ENSMUST00000211206 2140 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Usp46P62069 Lrp12-202ENSMUST00000110305 4244 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Usp46P62069 Ddit4l-201ENSMUST00000053855 2722 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Usp46P62069 Enoph1-201ENSMUST00000031268 1420 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Usp46P62069 Fgfr1-214ENSMUST00000178276 4741 ntTSL 5 BASIC16.22■□□□□ 0.19
Usp46P62069 Gm11185-201ENSMUST00000117732 1007 ntBASIC16.22■□□□□ 0.19
Usp46P62069 Gm11594-201ENSMUST00000122313 162 ntBASIC16.22■□□□□ 0.19
Usp46P62069 Gm5264-201ENSMUST00000190584 848 ntBASIC16.22■□□□□ 0.19
Usp46P62069 Rpl31-205ENSMUST00000194746 703 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Usp46P62069 AC127302.2-201ENSMUST00000215212 268 ntBASIC16.22■□□□□ 0.19
Usp46P62069 Fahd2a-201ENSMUST00000028848 1211 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Usp46P62069 Rnf7-202ENSMUST00000071301 334 ntTSL 2 BASIC16.22■□□□□ 0.19
Usp46P62069 Pde4a-201ENSMUST00000003395 2524 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Usp46P62069 Fam160a2-203ENSMUST00000118726 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Usp46P62069 Ofd1-201ENSMUST00000049501 4453 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Usp46P62069 BC030336-201ENSMUST00000060175 4831 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Usp46P62069 Pqlc3-208ENSMUST00000222203 1706 ntTSL 5 BASIC16.22■□□□□ 0.19
Usp46P62069 Nrip2-202ENSMUST00000120405 1468 ntTSL 2 BASIC16.22■□□□□ 0.19
Usp46P62069 Smad3-201ENSMUST00000034973 5090 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Usp46P62069 Adcy7-203ENSMUST00000169037 5198 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Usp46P62069 Acaa1b-201ENSMUST00000010795 1689 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Usp46P62069 Gm43072-201ENSMUST00000200283 1671 ntBASIC16.21■□□□□ 0.19
Usp46P62069 St7l-211ENSMUST00000200132 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Usp46P62069 Gramd3-201ENSMUST00000070166 2605 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Usp46P62069 Pla2g10-201ENSMUST00000023364 1423 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Usp46P62069 Wnt5b-202ENSMUST00000118120 2115 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Usp46P62069 Clns1a-201ENSMUST00000026506 1504 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Usp46P62069 Mrpl58-202ENSMUST00000103036 749 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Usp46P62069 Ndufa5-202ENSMUST00000118558 315 ntTSL 2 BASIC16.21■□□□□ 0.19
Usp46P62069 Gm13403-202ENSMUST00000134271 674 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Usp46P62069 Retsat-204ENSMUST00000176168 1203 ntTSL 5 BASIC16.21■□□□□ 0.19
Usp46P62069 Gm4899-201ENSMUST00000178708 719 ntBASIC16.21■□□□□ 0.19
Usp46P62069 Gm20337-201ENSMUST00000219062 1118 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Usp46P62069 Col18a1-202ENSMUST00000081654 5063 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Usp46P62069 Sptbn4-203ENSMUST00000108363 4724 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Retrieved 100 of 76,532 protein–RNA pairs in 35.4 ms