Protein–RNA interactions for Protein: P61620

Sec61a1, Protein transport protein Sec61 subunit alpha isoform 1, mousemouse

Known RBP Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sec61a1P61620 4932702P03Rik-201ENSMUST00000138447 1482 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Sec61a1P61620 Tbc1d22b-201ENSMUST00000048677 3592 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Sec61a1P61620 Pcdh20-201ENSMUST00000061628 5241 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Sec61a1P61620 Fancm-201ENSMUST00000058889 7775 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Sec61a1P61620 Ube2e1-201ENSMUST00000022296 1408 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Sec61a1P61620 Sept6-203ENSMUST00000115239 1845 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
Sec61a1P61620 Kirrel-202ENSMUST00000107618 7278 ntAPPRIS P2 TSL 5 BASIC13.71□□□□□ -0.22
Sec61a1P61620 Midn-202ENSMUST00000099492 3597 ntAPPRIS ALT2 TSL 5 BASIC13.71□□□□□ -0.22
Sec61a1P61620 Snx11-201ENSMUST00000021246 2551 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Sec61a1P61620 Casp8-201ENSMUST00000027189 2585 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.22
Sec61a1P61620 Gm2788-204ENSMUST00000209288 1966 ntTSL 5 BASIC13.71□□□□□ -0.22
Sec61a1P61620 Vcan-201ENSMUST00000109543 2321 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Sec61a1P61620 Yipf5-201ENSMUST00000025364 2329 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Sec61a1P61620 D430001F17Rik-201ENSMUST00000141344 1858 ntTSL 5 BASIC13.7□□□□□ -0.22
Sec61a1P61620 Pim1-201ENSMUST00000024811 2638 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Sec61a1P61620 Eva1c-201ENSMUST00000037539 1698 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Sec61a1P61620 Gja4-201ENSMUST00000053753 1685 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Sec61a1P61620 Gm45133-201ENSMUST00000207548 2773 ntBASIC13.7□□□□□ -0.22
Sec61a1P61620 Gm10489-201ENSMUST00000180511 1466 ntTSL 2 BASIC13.7□□□□□ -0.22
Sec61a1P61620 Zbtb46-205ENSMUST00000180222 2014 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Sec61a1P61620 Rad23a-202ENSMUST00000109761 1842 ntAPPRIS ALT1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Sec61a1P61620 Gm12359-202ENSMUST00000141696 713 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Sec61a1P61620 Rerg-204ENSMUST00000149100 635 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Sec61a1P61620 Gm20422-202ENSMUST00000149782 956 ntTSL 2 BASIC13.7□□□□□ -0.22
Sec61a1P61620 Gm12359-203ENSMUST00000153181 680 ntTSL 3 BASIC13.7□□□□□ -0.22
Sec61a1P61620 Psme2-208ENSMUST00000161807 962 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Sec61a1P61620 Hist1h2bc-201ENSMUST00000018246 1156 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Sec61a1P61620 Gm17807-201ENSMUST00000186869 298 ntBASIC13.7□□□□□ -0.22
Sec61a1P61620 F420014N23Rik-202ENSMUST00000219079 659 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Sec61a1P61620 Hist1h2ba-201ENSMUST00000052776 384 ntAPPRIS P1 BASIC13.7□□□□□ -0.22
Sec61a1P61620 Sftpb-201ENSMUST00000070437 1131 ntAPPRIS ALT2 TSL 5 BASIC13.7□□□□□ -0.22
Sec61a1P61620 Gm26892-201ENSMUST00000181695 1636 ntTSL 5 BASIC13.7□□□□□ -0.22
Sec61a1P61620 Akap1-201ENSMUST00000018572 3758 ntAPPRIS P2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Sec61a1P61620 Crem-228ENSMUST00000150235 2662 ntAPPRIS P2 TSL 5 BASIC13.7□□□□□ -0.22
Sec61a1P61620 Usp35-201ENSMUST00000139582 4262 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
Sec61a1P61620 Prss54-201ENSMUST00000052690 1438 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Sec61a1P61620 Zfp202-203ENSMUST00000168832 3329 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Sec61a1P61620 Ppp2r1a-201ENSMUST00000007708 2410 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Sec61a1P61620 Med20-201ENSMUST00000024778 2054 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Sec61a1P61620 Runx2-202ENSMUST00000113571 5898 ntAPPRIS P3 TSL 5 BASIC13.7□□□□□ -0.22
Sec61a1P61620 Apmap-201ENSMUST00000046399 2235 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Sec61a1P61620 Dsel-201ENSMUST00000035462 5759 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Sec61a1P61620 Mospd2-201ENSMUST00000004715 2015 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Sec61a1P61620 Lncpint-201ENSMUST00000115107 1676 ntTSL 5 BASIC13.69□□□□□ -0.22
Sec61a1P61620 Lrrc56-201ENSMUST00000047093 2197 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
Sec61a1P61620 Derl1-201ENSMUST00000022993 3175 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Sec61a1P61620 Arvcf-205ENSMUST00000115614 4698 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Sec61a1P61620 Bnip2-203ENSMUST00000117450 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Sec61a1P61620 Asb2-204ENSMUST00000149431 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Sec61a1P61620 6030419C18Rik-202ENSMUST00000216294 1601 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Sec61a1P61620 Vps37c-201ENSMUST00000087951 2415 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Sec61a1P61620 Pitpnm1-202ENSMUST00000100022 4512 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Sec61a1P61620 Men1-204ENSMUST00000113500 2742 ntAPPRIS P2 TSL 5 BASIC13.69□□□□□ -0.22
Sec61a1P61620 Rabggta-205ENSMUST00000227061 2882 ntAPPRIS P1 BASIC13.69□□□□□ -0.22
Sec61a1P61620 Sirt7-202ENSMUST00000106183 427 ntTSL 3 BASIC13.69□□□□□ -0.22
Sec61a1P61620 Gm15952-201ENSMUST00000122858 490 ntTSL 3 BASIC13.69□□□□□ -0.22
Sec61a1P61620 Blvrb-204ENSMUST00000133750 509 ntTSL 2 BASIC13.69□□□□□ -0.22
Sec61a1P61620 Gm15890-201ENSMUST00000161024 770 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Sec61a1P61620 Znhit2-201ENSMUST00000162726 1281 ntAPPRIS P1 BASIC13.69□□□□□ -0.22
Sec61a1P61620 C130032M10Rik-201ENSMUST00000180393 728 ntAPPRIS P1 BASIC13.69□□□□□ -0.22
Sec61a1P61620 Gm26620-201ENSMUST00000180542 817 ntAPPRIS P1 BASIC13.69□□□□□ -0.22
Sec61a1P61620 Gm27742-201ENSMUST00000184667 60 ntBASIC13.69□□□□□ -0.22
Sec61a1P61620 Gm18421-201ENSMUST00000204122 625 ntBASIC13.69□□□□□ -0.22
Sec61a1P61620 Gm19935-201ENSMUST00000209208 979 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Sec61a1P61620 Gm45631-201ENSMUST00000210318 1244 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Sec61a1P61620 Otx2os1-206ENSMUST00000228153 787 ntBASIC13.69□□□□□ -0.22
Sec61a1P61620 Mgst3-201ENSMUST00000028005 1097 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Sec61a1P61620 Shroom1-204ENSMUST00000109013 3312 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
Sec61a1P61620 Gm45546-201ENSMUST00000211053 2394 ntBASIC13.69□□□□□ -0.22
Sec61a1P61620 Col4a2-201ENSMUST00000033899 6450 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Sec61a1P61620 Nkain2-203ENSMUST00000191234 3760 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Sec61a1P61620 Fam76a-202ENSMUST00000097856 1863 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Sec61a1P61620 Syn1-202ENSMUST00000115345 3261 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Sec61a1P61620 Camk1g-204ENSMUST00000169907 1968 ntTSL 5 BASIC13.69□□□□□ -0.22
Sec61a1P61620 Mst1-201ENSMUST00000035211 2262 ntAPPRIS P2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Sec61a1P61620 Slc43a3-201ENSMUST00000090726 2583 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Sec61a1P61620 Tmem2-201ENSMUST00000025663 6585 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Sec61a1P61620 Shroom3-202ENSMUST00000113054 6401 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Sec61a1P61620 Senp6-202ENSMUST00000164859 3853 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Sec61a1P61620 Il11ra1-204ENSMUST00000108042 1768 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Sec61a1P61620 Olah-203ENSMUST00000194918 1764 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Sec61a1P61620 Wdr55-201ENSMUST00000049323 1498 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Sec61a1P61620 Gpsm3-201ENSMUST00000038244 1343 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Sec61a1P61620 Htr7-202ENSMUST00000164639 3057 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Sec61a1P61620 Nhlh2-202ENSMUST00000196324 2647 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Sec61a1P61620 Slc35f4-205ENSMUST00000146164 2480 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Sec61a1P61620 Coro1c-201ENSMUST00000004646 3491 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Sec61a1P61620 Nr1h3-202ENSMUST00000111354 1738 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Sec61a1P61620 Fgfr1op2-204ENSMUST00000111663 2880 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Sec61a1P61620 Kdm3a-201ENSMUST00000065509 4816 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Sec61a1P61620 Wbp2-202ENSMUST00000106444 1012 ntTSL 2 BASIC13.68□□□□□ -0.22
Sec61a1P61620 Srpx-202ENSMUST00000115543 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Sec61a1P61620 Dohh-202ENSMUST00000121047 946 ntTSL 2 BASIC13.68□□□□□ -0.22
Sec61a1P61620 Hotairm1-202ENSMUST00000132559 713 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Sec61a1P61620 Gm19553-201ENSMUST00000175723 494 ntTSL 5 BASIC13.68□□□□□ -0.22
Sec61a1P61620 Gm45328-201ENSMUST00000210942 917 ntBASIC13.68□□□□□ -0.22
Sec61a1P61620 Plekha4-207ENSMUST00000211227 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Sec61a1P61620 Prss40-201ENSMUST00000047840 1275 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Sec61a1P61620 Gmnn-201ENSMUST00000006898 1127 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Sec61a1P61620 Trappc12-203ENSMUST00000170994 2818 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 20.7 ms