Protein–RNA interactions for Protein: P58771

Tpm1, Tropomyosin alpha-1 chain, mousemouse

Predictions only

Length 284 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tpm1P58771 Slc35e2-201ENSMUST00000043829 2910 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Tpm1P58771 Dhodh-209ENSMUST00000143900 1455 ntTSL 5 BASIC17.36■□□□□ 0.37
Tpm1P58771 Shd-201ENSMUST00000044216 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Tpm1P58771 Slc39a1-201ENSMUST00000015467 2364 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Tpm1P58771 Tatdn2-205ENSMUST00000204753 2645 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Tpm1P58771 Elmsan1-202ENSMUST00000110294 7156 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
Tpm1P58771 Eif4ebp2-201ENSMUST00000020288 5784 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Tpm1P58771 Camk1g-204ENSMUST00000169907 1968 ntTSL 5 BASIC17.35■□□□□ 0.37
Tpm1P58771 Dmxl1-202ENSMUST00000180611 11319 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Tpm1P58771 Zswim8-204ENSMUST00000223840 5674 ntAPPRIS ALT2 BASIC17.35■□□□□ 0.37
Tpm1P58771 Ncs1-201ENSMUST00000000199 4653 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Tpm1P58771 Atp13a3-202ENSMUST00000100013 7310 ntAPPRIS P4 TSL 5 BASIC17.35■□□□□ 0.37
Tpm1P58771 Rpl14-201ENSMUST00000165532 1009 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Tpm1P58771 Cdc34-202ENSMUST00000166603 1078 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Tpm1P58771 Fbxo6-208ENSMUST00000168503 1240 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
Tpm1P58771 Dleu2-210ENSMUST00000183054 722 ntTSL 5 BASIC17.35■□□□□ 0.37
Tpm1P58771 Mir1668-201ENSMUST00000184114 107 ntBASIC17.35■□□□□ 0.37
Tpm1P58771 Gm45148-201ENSMUST00000208578 513 ntTSL 5 BASIC17.35■□□□□ 0.37
Tpm1P58771 Ttc22-201ENSMUST00000047922 2554 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Tpm1P58771 Zfp362-201ENSMUST00000071108 2674 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Tpm1P58771 Fgfr1op2-203ENSMUST00000067404 2766 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Tpm1P58771 Synj1-203ENSMUST00000121759 7090 ntAPPRIS P4 TSL 5 BASIC17.35■□□□□ 0.37
Tpm1P58771 Sh3glb1-205ENSMUST00000199854 1416 ntTSL 5 BASIC17.35■□□□□ 0.37
Tpm1P58771 Il9r-204ENSMUST00000142396 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Tpm1P58771 Ptn-201ENSMUST00000101534 1614 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Tpm1P58771 Hectd1-202ENSMUST00000179265 9012 ntTSL 5 BASIC17.35■□□□□ 0.37
Tpm1P58771 Dmrtb1-201ENSMUST00000069271 1861 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
Tpm1P58771 Anxa4-201ENSMUST00000001187 2002 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Tpm1P58771 Synm-204ENSMUST00000208231 4457 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Tpm1P58771 Pim1-201ENSMUST00000024811 2638 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Tpm1P58771 Gm26793-201ENSMUST00000180930 2732 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Tpm1P58771 Zfp316-201ENSMUST00000051665 3054 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Tpm1P58771 Dennd5b-201ENSMUST00000111557 9831 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
Tpm1P58771 Micall2-201ENSMUST00000044642 3346 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Tpm1P58771 Tomm70a-201ENSMUST00000166897 3778 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Tpm1P58771 Srrm3-204ENSMUST00000144211 3932 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Tpm1P58771 Wt1-202ENSMUST00000111099 2441 ntTSL 5 BASIC17.34■□□□□ 0.37
Tpm1P58771 Gm15039-201ENSMUST00000118914 875 ntBASIC17.34■□□□□ 0.37
Tpm1P58771 Rspry1-202ENSMUST00000121101 3092 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Tpm1P58771 2210408F21Rik-211ENSMUST00000151800 750 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Tpm1P58771 Unc93b1-203ENSMUST00000162708 2266 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
Tpm1P58771 Ascl5-201ENSMUST00000180436 567 ntAPPRIS P1 BASIC17.34■□□□□ 0.37
Tpm1P58771 Gm45618-201ENSMUST00000209890 660 ntAPPRIS P1 BASIC17.34■□□□□ 0.37
Tpm1P58771 Sorbs1-225ENSMUST00000226047 2582 ntAPPRIS ALT2 BASIC17.34■□□□□ 0.37
Tpm1P58771 Srrd-201ENSMUST00000031289 1110 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Tpm1P58771 Cpz-201ENSMUST00000038676 2245 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Tpm1P58771 Ldlrad1-201ENSMUST00000094916 1093 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
Tpm1P58771 Sirpa-202ENSMUST00000099113 3342 ntTSL 3 BASIC17.34■□□□□ 0.37
Tpm1P58771 Midn-202ENSMUST00000099492 3597 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
Tpm1P58771 Pygo2-201ENSMUST00000060061 3198 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Tpm1P58771 Spock1-203ENSMUST00000185905 2794 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Tpm1P58771 Ttc14-202ENSMUST00000108210 2684 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
Tpm1P58771 Rexo4-202ENSMUST00000114020 2278 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.37
Tpm1P58771 Gm15939-201ENSMUST00000160756 2147 ntTSL 5 BASIC17.33■□□□□ 0.37
Tpm1P58771 Trappc11-202ENSMUST00000120987 2060 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
Tpm1P58771 Ecm1-201ENSMUST00000029753 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.37
Tpm1P58771 Hs3st1-201ENSMUST00000053116 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Tpm1P58771 Chst10-205ENSMUST00000193441 4999 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
Tpm1P58771 Mamstr-201ENSMUST00000148532 1606 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Tpm1P58771 Spag1-202ENSMUST00000171205 3219 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Tpm1P58771 H2-K1-205ENSMUST00000172912 1570 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.37
Tpm1P58771 Emd-201ENSMUST00000002029 1595 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Tpm1P58771 Gm42743-201ENSMUST00000051089 1511 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
Tpm1P58771 Gm11748-201ENSMUST00000153825 1498 ntTSL 2 BASIC17.33■□□□□ 0.37
Tpm1P58771 Ppip5k2-201ENSMUST00000042509 5882 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.37
Tpm1P58771 Hnf4a-201ENSMUST00000018094 4356 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Tpm1P58771 Tbcb-201ENSMUST00000006254 1416 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Tpm1P58771 Rest-202ENSMUST00000113449 6924 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Tpm1P58771 Fndc11-201ENSMUST00000050026 1387 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Tpm1P58771 Klhl26-202ENSMUST00000166976 2734 ntTSL 2 BASIC17.33■□□□□ 0.36
Tpm1P58771 1300014J16Rik-201ENSMUST00000219015 1337 ntBASIC17.33■□□□□ 0.36
Tpm1P58771 Oip5-202ENSMUST00000123818 1082 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Tpm1P58771 Rapgef3os1-201ENSMUST00000149373 483 ntTSL 3 BASIC17.33■□□□□ 0.36
Tpm1P58771 Surf1-201ENSMUST00000015934 1173 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Tpm1P58771 Senp1-204ENSMUST00000180657 3806 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
Tpm1P58771 Fgf22-203ENSMUST00000219981 1070 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Tpm1P58771 AC159205.6-201ENSMUST00000224935 887 ntBASIC17.33■□□□□ 0.36
Tpm1P58771 Espn-202ENSMUST00000049305 1142 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Tpm1P58771 Tmem143-203ENSMUST00000209350 2466 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Tpm1P58771 Snph-204ENSMUST00000109877 3367 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
Tpm1P58771 Fam53b-203ENSMUST00000097999 5465 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Tpm1P58771 Dnmt3b-210ENSMUST00000109774 4320 ntAPPRIS P4 TSL 1 (best) BASIC17.33■□□□□ 0.36
Tpm1P58771 Pdlim7-206ENSMUST00000131306 1915 ntTSL 2 BASIC17.33■□□□□ 0.36
Tpm1P58771 Fgf15-201ENSMUST00000033389 1810 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Tpm1P58771 Nat8f3-201ENSMUST00000050780 1821 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Tpm1P58771 Mdp1-201ENSMUST00000002400 1733 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Tpm1P58771 Phf8-204ENSMUST00000112666 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
Tpm1P58771 Vldlr-202ENSMUST00000047645 3260 ntTSL 5 BASIC17.32■□□□□ 0.36
Tpm1P58771 Gm16425-201ENSMUST00000118143 3130 ntBASIC17.32■□□□□ 0.36
Tpm1P58771 Morc4-201ENSMUST00000033811 4412 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
Tpm1P58771 Pspc1-202ENSMUST00000163924 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Tpm1P58771 Kifc3-203ENSMUST00000169748 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Tpm1P58771 Mpst-203ENSMUST00000169133 1309 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
Tpm1P58771 Rgs19-207ENSMUST00000108779 642 ntTSL 5 BASIC17.32■□□□□ 0.36
Tpm1P58771 4930467K11Rik-201ENSMUST00000180831 723 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Tpm1P58771 C430014B12Rik-202ENSMUST00000186858 657 ntTSL 2 BASIC17.32■□□□□ 0.36
Tpm1P58771 Iscu-201ENSMUST00000026937 957 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Tpm1P58771 Mrps12-201ENSMUST00000056078 722 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Tpm1P58771 4933427E11Rik-201ENSMUST00000056711 1214 ntBASIC17.32■□□□□ 0.36
Tpm1P58771 Syt6-201ENSMUST00000090697 4416 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 33.6 ms