Protein–RNA interactions for Protein: P55096

Abcd3, ATP-binding cassette sub-family D member 3, mousemouse

Predictions only

Length 659 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Abcd3P55096 Tcf3-204ENSMUST00000105340 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Abcd3P55096 Tcf3-202ENSMUST00000020379 2829 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Abcd3P55096 Ccr9-202ENSMUST00000163559 3004 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Abcd3P55096 Naa10-206ENSMUST00000114391 834 ntTSL 5 BASIC13.9□□□□□ -0.18
Abcd3P55096 Gm8344-201ENSMUST00000119813 856 ntBASIC13.9□□□□□ -0.18
Abcd3P55096 Blvrb-204ENSMUST00000133750 509 ntTSL 2 BASIC13.9□□□□□ -0.18
Abcd3P55096 Tsc22d1-208ENSMUST00000142683 797 ntTSL 3 BASIC13.9□□□□□ -0.18
Abcd3P55096 Eapp-203ENSMUST00000160085 676 ntTSL 3 BASIC13.9□□□□□ -0.18
Abcd3P55096 Gm26620-201ENSMUST00000180542 817 ntAPPRIS P1 BASIC13.9□□□□□ -0.18
Abcd3P55096 Pmf1-205ENSMUST00000193338 795 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Abcd3P55096 Gm18669-201ENSMUST00000216049 778 ntBASIC13.9□□□□□ -0.18
Abcd3P55096 Il3ra-205ENSMUST00000224877 1128 ntAPPRIS ALT2 BASIC13.9□□□□□ -0.18
Abcd3P55096 Ube2t-201ENSMUST00000027687 1116 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Abcd3P55096 A930016O22Rik-201ENSMUST00000047020 1214 ntTSL 2 BASIC13.9□□□□□ -0.18
Abcd3P55096 Kcnq4-201ENSMUST00000030376 3919 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.18
Abcd3P55096 Crhbp-202ENSMUST00000221025 1779 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Abcd3P55096 Nrsn1-204ENSMUST00000167305 1891 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Abcd3P55096 Wfikkn1-201ENSMUST00000095487 1981 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Abcd3P55096 Ptpa-203ENSMUST00000113603 2169 ntTSL 5 BASIC13.9□□□□□ -0.18
Abcd3P55096 Spire2-202ENSMUST00000212404 2158 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Abcd3P55096 Mdga1-208ENSMUST00000171691 8339 ntAPPRIS ALT2 TSL 5 BASIC13.9□□□□□ -0.18
Abcd3P55096 Rell1-204ENSMUST00000154169 3241 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Abcd3P55096 Gjb6-201ENSMUST00000039380 2105 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Abcd3P55096 Acbd5-206ENSMUST00000155602 1714 ntAPPRIS ALT2 TSL 2 BASIC13.9□□□□□ -0.18
Abcd3P55096 Mapk8ip3-205ENSMUST00000119115 4173 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.19
Abcd3P55096 Ovca2-201ENSMUST00000071562 2670 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Abcd3P55096 Zbed5-201ENSMUST00000041466 2492 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Abcd3P55096 Grk6-202ENSMUST00000099482 2169 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
Abcd3P55096 Ldb3-208ENSMUST00000228044 1883 ntAPPRIS ALT2 BASIC13.89□□□□□ -0.19
Abcd3P55096 Trappc10-201ENSMUST00000000384 5047 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Abcd3P55096 Car10-205ENSMUST00000107861 2613 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Abcd3P55096 Gm9867-201ENSMUST00000192212 2647 ntBASIC13.89□□□□□ -0.19
Abcd3P55096 Adprh-201ENSMUST00000002923 1583 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Abcd3P55096 Gm45351-201ENSMUST00000210683 2545 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Abcd3P55096 Gm5837-201ENSMUST00000191844 1369 ntBASIC13.89□□□□□ -0.19
Abcd3P55096 Foxp4-202ENSMUST00000113262 3198 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Abcd3P55096 Krtap1-4-201ENSMUST00000100479 593 ntAPPRIS P1 BASIC13.89□□□□□ -0.19
Abcd3P55096 Fam3a-203ENSMUST00000114139 931 ntTSL 5 BASIC13.89□□□□□ -0.19
Abcd3P55096 Gm13054-201ENSMUST00000154192 820 ntTSL 3 BASIC13.89□□□□□ -0.19
Abcd3P55096 Ppib-201ENSMUST00000034947 892 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Abcd3P55096 Vamp8-201ENSMUST00000059983 820 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Abcd3P55096 Dupd1-201ENSMUST00000073870 1138 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Abcd3P55096 Ttll5-204ENSMUST00000110220 2655 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Abcd3P55096 9430015G10Rik-208ENSMUST00000169550 2660 ntAPPRIS P1 TSL 5 BASIC13.89□□□□□ -0.19
Abcd3P55096 Tnfaip2-201ENSMUST00000102745 3762 ntAPPRIS P2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Abcd3P55096 Errfi1-201ENSMUST00000030811 3043 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Abcd3P55096 Rnf111-201ENSMUST00000034739 4880 ntAPPRIS P2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Abcd3P55096 Elmo2-203ENSMUST00000094329 3466 ntAPPRIS P2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Abcd3P55096 Rbm11-201ENSMUST00000046378 1400 ntAPPRIS P2 TSL 5 BASIC13.89□□□□□ -0.19
Abcd3P55096 Zfp277-202ENSMUST00000069692 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Abcd3P55096 Ripk3-203ENSMUST00000178399 1865 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Abcd3P55096 Rbm3-206ENSMUST00000115621 1338 ntAPPRIS ALT1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Abcd3P55096 Espnl-202ENSMUST00000176156 2886 ntTSL 5 BASIC13.89□□□□□ -0.19
Abcd3P55096 Abraxas1-202ENSMUST00000055245 2139 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Abcd3P55096 Ddx49-201ENSMUST00000008004 2137 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Abcd3P55096 Cadps2-205ENSMUST00000115358 4848 ntAPPRIS ALT2 TSL 5 BASIC13.88□□□□□ -0.19
Abcd3P55096 Tox3-201ENSMUST00000109621 3356 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Abcd3P55096 G2e3-202ENSMUST00000119211 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Abcd3P55096 Rprd1a-201ENSMUST00000046206 4297 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Abcd3P55096 Pcsk6-201ENSMUST00000055576 4405 ntAPPRIS P3 TSL 5 BASIC13.88□□□□□ -0.19
Abcd3P55096 Tango6-202ENSMUST00000211979 2722 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Abcd3P55096 Ipo8-201ENSMUST00000048418 5360 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Abcd3P55096 Adnp-201ENSMUST00000057793 4917 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
Abcd3P55096 Trappc5-201ENSMUST00000044857 2546 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Abcd3P55096 Mkrn3-201ENSMUST00000094340 2547 ntAPPRIS P1 BASIC13.88□□□□□ -0.19
Abcd3P55096 Ssfa2-202ENSMUST00000111785 5168 ntAPPRIS P2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Abcd3P55096 Slc41a3-202ENSMUST00000044019 2412 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Abcd3P55096 Rfc5-201ENSMUST00000086461 2796 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Abcd3P55096 Phactr2-203ENSMUST00000105545 8556 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Abcd3P55096 Mef2b-201ENSMUST00000110140 1223 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Abcd3P55096 Mef2b-202ENSMUST00000110141 1253 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Abcd3P55096 H2-Q6-201ENSMUST00000113879 981 ntAPPRIS P1 TSL 2 BASIC13.88□□□□□ -0.19
Abcd3P55096 Gm12644-201ENSMUST00000119935 606 ntBASIC13.88□□□□□ -0.19
Abcd3P55096 1300002E11Rik-207ENSMUST00000211443 767 ntTSL 5 BASIC13.88□□□□□ -0.19
Abcd3P55096 Slc37a4-203ENSMUST00000213388 2344 ntAPPRIS P2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Abcd3P55096 Gm45212-201ENSMUST00000205831 3403 ntBASIC13.88□□□□□ -0.19
Abcd3P55096 Usp30-201ENSMUST00000031588 4604 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Abcd3P55096 2810474O19Rik-209ENSMUST00000189932 5269 ntAPPRIS P2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Abcd3P55096 Slc25a3-206ENSMUST00000170810 1341 ntAPPRIS ALT2 TSL 5 BASIC13.88□□□□□ -0.19
Abcd3P55096 Pmm1-201ENSMUST00000023112 1300 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Abcd3P55096 Pisd-201ENSMUST00000061895 2183 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
Abcd3P55096 BC037039-201ENSMUST00000192003 2205 ntBASIC13.87□□□□□ -0.19
Abcd3P55096 Map3k3-201ENSMUST00000002044 3450 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Abcd3P55096 Sybu-202ENSMUST00000110267 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Abcd3P55096 Bclaf3-202ENSMUST00000112464 3366 ntAPPRIS P2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Abcd3P55096 Ahsa1-201ENSMUST00000021425 1377 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Abcd3P55096 Ecm1-201ENSMUST00000029753 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Abcd3P55096 Isg20l2-201ENSMUST00000055984 2893 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Abcd3P55096 Cyp2d10-201ENSMUST00000072776 1647 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Abcd3P55096 Aaed1-207ENSMUST00000222570 3011 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Abcd3P55096 Med7-203ENSMUST00000109232 2547 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Abcd3P55096 Zfp422-203ENSMUST00000112880 2523 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Abcd3P55096 9930021J03Rik-204ENSMUST00000177155 6632 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
Abcd3P55096 Gm12963-201ENSMUST00000131846 783 ntTSL 5 BASIC13.87□□□□□ -0.19
Abcd3P55096 2210408F21Rik-212ENSMUST00000152157 490 ntTSL 2 BASIC13.87□□□□□ -0.19
Abcd3P55096 Tm4sf5-201ENSMUST00000019063 1000 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Abcd3P55096 Gm8655-201ENSMUST00000221159 852 ntBASIC13.87□□□□□ -0.19
Abcd3P55096 Ydjc-201ENSMUST00000069064 1297 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Abcd3P55096 Methig1-201ENSMUST00000075675 1029 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Abcd3P55096 Fyn-201ENSMUST00000063091 3562 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Retrieved 100 of 76,532 protein–RNA pairs in 33.9 ms