Protein–RNA interactions for Protein: P55066

Ncan, Neurocan core protein, mousemouse

Predictions only

Length 1,268 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NcanP55066 Zufsp-202ENSMUST00000218055 2180 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
NcanP55066 Tmem121b-201ENSMUST00000178687 4869 ntAPPRIS P1 BASIC16.27■□□□□ 0.19
NcanP55066 Tprn-201ENSMUST00000114336 2787 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
NcanP55066 Dvl2-201ENSMUST00000019362 2968 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
NcanP55066 Cyp2t4-201ENSMUST00000108385 1599 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
NcanP55066 Gm7901-201ENSMUST00000120430 1597 ntBASIC16.26■□□□□ 0.19
NcanP55066 Zfyve9-202ENSMUST00000106657 6459 ntAPPRIS P2 TSL 5 BASIC16.26■□□□□ 0.19
NcanP55066 Schip1-201ENSMUST00000029346 2201 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
NcanP55066 Ddx39-202ENSMUST00000109810 1794 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
NcanP55066 Ninj1-202ENSMUST00000120733 1321 ntTSL 5 BASIC16.26■□□□□ 0.19
NcanP55066 Arxes2-201ENSMUST00000058119 1532 ntAPPRIS P1 BASIC16.26■□□□□ 0.19
NcanP55066 Pcbp3-206ENSMUST00000168465 1748 ntAPPRIS P3 TSL 5 BASIC16.26■□□□□ 0.19
NcanP55066 Otub1-201ENSMUST00000025679 1713 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
NcanP55066 Nfu1-203ENSMUST00000120240 1195 ntAPPRIS P3 TSL 5 BASIC16.26■□□□□ 0.19
NcanP55066 Magi3-203ENSMUST00000122303 3827 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
NcanP55066 Gm17077-201ENSMUST00000133179 279 ntTSL 5 BASIC16.26■□□□□ 0.19
NcanP55066 Tex22-203ENSMUST00000146107 1130 ntAPPRIS P1 TSL 2 BASIC16.26■□□□□ 0.19
NcanP55066 1700072B07Rik-201ENSMUST00000191141 445 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
NcanP55066 4930592C13Rik-201ENSMUST00000196791 661 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
NcanP55066 Hsd17b14-205ENSMUST00000210300 797 ntTSL 5 BASIC16.26■□□□□ 0.19
NcanP55066 Gm29682-201ENSMUST00000210896 1251 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
NcanP55066 2610008E11Rik-204ENSMUST00000220220 799 ntTSL 2 BASIC16.26■□□□□ 0.19
NcanP55066 Gpaa1-201ENSMUST00000023221 2107 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
NcanP55066 Eaf2-201ENSMUST00000023537 849 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
NcanP55066 Cenpm-201ENSMUST00000089155 1109 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
NcanP55066 B4galt5-201ENSMUST00000109221 4210 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
NcanP55066 Plppr2-202ENSMUST00000188468 1480 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
NcanP55066 Cldn14-201ENSMUST00000050962 1457 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
NcanP55066 Abhd16b-201ENSMUST00000069649 1775 ntAPPRIS P1 BASIC16.26■□□□□ 0.19
NcanP55066 Ntng1-203ENSMUST00000106570 1386 ntTSL 5 BASIC16.26■□□□□ 0.19
NcanP55066 Ddx49-201ENSMUST00000008004 2137 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
NcanP55066 Ccdc149-201ENSMUST00000059428 3295 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
NcanP55066 Dhx15-201ENSMUST00000031061 3010 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
NcanP55066 Fnbp1-204ENSMUST00000100208 1859 ntTSL 5 BASIC16.25■□□□□ 0.19
NcanP55066 Ush1c-208ENSMUST00000177212 1696 ntAPPRIS ALT2 TSL 5 BASIC16.25■□□□□ 0.19
NcanP55066 Tspan32-204ENSMUST00000105923 1499 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
NcanP55066 Pdss2-202ENSMUST00000159139 1467 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
NcanP55066 Smpdl3b-201ENSMUST00000030709 2006 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
NcanP55066 Rab37-202ENSMUST00000067754 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
NcanP55066 Mir1247-201ENSMUST00000116706 82 ntBASIC16.25■□□□□ 0.19
NcanP55066 Fzr1-202ENSMUST00000118812 1215 ntTSL 5 BASIC16.25■□□□□ 0.19
NcanP55066 Gm6539-201ENSMUST00000119157 1064 ntBASIC16.25■□□□□ 0.19
NcanP55066 Gm15869-201ENSMUST00000126427 734 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
NcanP55066 Mcfd2-202ENSMUST00000129616 813 ntAPPRIS P1 TSL 3 BASIC16.25■□□□□ 0.19
NcanP55066 Pigyl-202ENSMUST00000148088 676 ntAPPRIS P1 TSL 2 BASIC16.25■□□□□ 0.19
NcanP55066 Gm13568-201ENSMUST00000156099 446 ntTSL 5 BASIC16.25■□□□□ 0.19
NcanP55066 Pfdn6-205ENSMUST00000174426 396 ntTSL 2 BASIC16.25■□□□□ 0.19
NcanP55066 C030018K13Rik-202ENSMUST00000196829 712 ntTSL 3 BASIC16.25■□□□□ 0.19
NcanP55066 Gm9908-201ENSMUST00000211534 448 ntBASIC16.25■□□□□ 0.19
NcanP55066 Mdk-201ENSMUST00000028672 1054 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
NcanP55066 Ucn-201ENSMUST00000043475 504 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
NcanP55066 Asap2-203ENSMUST00000090834 5097 ntTSL 5 BASIC16.25■□□□□ 0.19
NcanP55066 BC026585-201ENSMUST00000046743 1618 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
NcanP55066 Apbb1-209ENSMUST00000188368 1970 ntTSL 5 BASIC16.25■□□□□ 0.19
NcanP55066 Majin-202ENSMUST00000113528 1562 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
NcanP55066 Ppm1b-202ENSMUST00000112304 3262 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
NcanP55066 Zfp358-203ENSMUST00000208423 2200 ntAPPRIS P1 BASIC16.25■□□□□ 0.19
NcanP55066 A230060F14Rik-202ENSMUST00000190739 1889 ntBASIC16.25■□□□□ 0.19
NcanP55066 Plekha1-202ENSMUST00000075181 2301 ntAPPRIS P2 TSL 1 (best) BASIC16.24■□□□□ 0.19
NcanP55066 Arid1b-201ENSMUST00000092723 7150 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
NcanP55066 Atxn7-203ENSMUST00000223880 2946 ntAPPRIS P2 BASIC16.24■□□□□ 0.19
NcanP55066 Ccdc68-201ENSMUST00000043929 1618 ntAPPRIS P2 TSL 1 (best) BASIC16.24■□□□□ 0.19
NcanP55066 Ddx28-201ENSMUST00000058579 2262 ntAPPRIS P1 BASIC16.24■□□□□ 0.19
NcanP55066 Dctd-201ENSMUST00000033966 2072 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
NcanP55066 Pebp1-202ENSMUST00000111973 779 ntTSL 3 BASIC16.24■□□□□ 0.19
NcanP55066 Gm12742-201ENSMUST00000117326 410 ntBASIC16.24■□□□□ 0.19
NcanP55066 Mroh1-217ENSMUST00000162319 1244 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
NcanP55066 1700120B22Rik-201ENSMUST00000054837 464 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
NcanP55066 Cyp4f16-201ENSMUST00000003416 2227 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
NcanP55066 Ank1-207ENSMUST00000118733 8201 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
NcanP55066 Mpped2-202ENSMUST00000111063 2848 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
NcanP55066 Usp13-202ENSMUST00000108228 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
NcanP55066 Kmt2b-201ENSMUST00000006470 8469 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
NcanP55066 Tcta-201ENSMUST00000044725 1668 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
NcanP55066 Pard3-219ENSMUST00000162309 5659 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
NcanP55066 Psip1-201ENSMUST00000030207 3251 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
NcanP55066 Afg1l-201ENSMUST00000041024 2513 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
NcanP55066 Slc39a7-201ENSMUST00000025186 2244 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
NcanP55066 Krt83-201ENSMUST00000023718 1756 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
NcanP55066 Trnt1-204ENSMUST00000113249 1614 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
NcanP55066 Gm7669-201ENSMUST00000210184 1603 ntBASIC16.23■□□□□ 0.19
NcanP55066 Taf5l-201ENSMUST00000093039 2912 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
NcanP55066 Slc47a1-201ENSMUST00000010267 2639 ntAPPRIS P1 TSL 2 BASIC16.23■□□□□ 0.19
NcanP55066 Amigo1-202ENSMUST00000106656 5482 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
NcanP55066 Rusc2-201ENSMUST00000035645 5300 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
NcanP55066 Scube2-202ENSMUST00000106728 2890 ntAPPRIS ALT2 TSL 5 BASIC16.23■□□□□ 0.19
NcanP55066 Wnk2-205ENSMUST00000110097 6882 ntAPPRIS ALT2 TSL 5 BASIC16.23■□□□□ 0.19
NcanP55066 Wnk2-203ENSMUST00000091623 6897 ntAPPRIS P4 TSL 5 BASIC16.23■□□□□ 0.19
NcanP55066 Fntb-206ENSMUST00000137826 1442 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
NcanP55066 Trim31-201ENSMUST00000078438 2257 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
NcanP55066 Gm15317-201ENSMUST00000129569 699 ntTSL 3 BASIC16.23■□□□□ 0.19
NcanP55066 Gm17613-201ENSMUST00000138893 669 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
NcanP55066 Gm11535-201ENSMUST00000145517 778 ntTSL 3 BASIC16.23■□□□□ 0.19
NcanP55066 Gm27920-201ENSMUST00000183953 96 ntBASIC16.23■□□□□ 0.19
NcanP55066 Gm29542-201ENSMUST00000186876 704 ntTSL 3 BASIC16.23■□□□□ 0.19
NcanP55066 Gm36979-201ENSMUST00000193616 539 ntTSL 5 BASIC16.23■□□□□ 0.19
NcanP55066 4933405L10Rik-202ENSMUST00000211852 1097 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
NcanP55066 AC153937.4-201ENSMUST00000218479 661 ntTSL 3 BASIC16.23■□□□□ 0.19
NcanP55066 Pde6g-201ENSMUST00000026452 900 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
NcanP55066 Id2-202ENSMUST00000221761 1969 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
Retrieved 100 of 76,532 protein–RNA pairs in 22.7 ms