Protein–RNA interactions for Protein: P54276

Msh6, DNA mismatch repair protein Msh6, mousemouse

Known RBP Predictions only

Length 1,358 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msh6P54276 Coq10a-205ENSMUST00000220027 1307 ntAPPRIS ALT2 TSL 5 BASIC19.59■□□□□ 0.73
Msh6P54276 Fam170b-201ENSMUST00000104926 1694 ntAPPRIS P1 TSL 2 BASIC19.59■□□□□ 0.73
Msh6P54276 Rerg-203ENSMUST00000119610 890 ntTSL 3 BASIC19.59■□□□□ 0.73
Msh6P54276 Gm11505-201ENSMUST00000130442 737 ntTSL 3 BASIC19.59■□□□□ 0.73
Msh6P54276 2410006H16Rik-201ENSMUST00000131787 462 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Msh6P54276 Emp3-202ENSMUST00000164119 784 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Msh6P54276 Gm22175-201ENSMUST00000175007 78 ntBASIC19.59■□□□□ 0.73
Msh6P54276 Gm42560-201ENSMUST00000201216 1023 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Msh6P54276 Atf5-203ENSMUST00000209072 595 ntTSL 5 BASIC19.59■□□□□ 0.73
Msh6P54276 Cd3g-201ENSMUST00000002101 1023 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Msh6P54276 Gm29909-201ENSMUST00000214500 922 ntTSL 5 BASIC19.59■□□□□ 0.73
Msh6P54276 Lcn5-201ENSMUST00000028306 696 ntAPPRIS P4 TSL 1 (best) BASIC19.59■□□□□ 0.73
Msh6P54276 Whrn-206ENSMUST00000102867 4013 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
Msh6P54276 Gm42918-201ENSMUST00000199249 1580 ntBASIC19.59■□□□□ 0.73
Msh6P54276 Nudt18-203ENSMUST00000228768 1578 ntBASIC19.59■□□□□ 0.73
Msh6P54276 Pspc1-202ENSMUST00000163924 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
Msh6P54276 4933415F23Rik-201ENSMUST00000073179 1781 ntAPPRIS P1 BASIC19.59■□□□□ 0.73
Msh6P54276 Dusp4-201ENSMUST00000033930 2740 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Msh6P54276 Rnf181-201ENSMUST00000069580 1434 ntAPPRIS P3 TSL 1 (best) BASIC19.59■□□□□ 0.73
Msh6P54276 Efcab8-203ENSMUST00000175856 1703 ntAPPRIS ALT2 TSL 2 BASIC19.59■□□□□ 0.73
Msh6P54276 Emx2-201ENSMUST00000062216 2916 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Msh6P54276 Ntng1-203ENSMUST00000106570 1386 ntTSL 5 BASIC19.59■□□□□ 0.73
Msh6P54276 Tfap2a-206ENSMUST00000224665 1958 ntAPPRIS ALT1 BASIC19.59■□□□□ 0.73
Msh6P54276 Gm16675-202ENSMUST00000208508 2586 ntTSL 2 BASIC19.59■□□□□ 0.73
Msh6P54276 Rhox2h-201ENSMUST00000115162 779 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Msh6P54276 Gm15825-201ENSMUST00000159108 918 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
Msh6P54276 Plpp4-203ENSMUST00000205896 714 ntTSL 5 BASIC19.58■□□□□ 0.73
Msh6P54276 Pard6a-202ENSMUST00000098444 1273 ntTSL 2 BASIC19.58■□□□□ 0.73
Msh6P54276 Atxn7l2-203ENSMUST00000117784 2387 ntAPPRIS P2 TSL 1 (best) BASIC19.58■□□□□ 0.73
Msh6P54276 Gm29361-201ENSMUST00000183323 2000 ntBASIC19.58■□□□□ 0.73
Msh6P54276 Rap2a-201ENSMUST00000062117 4191 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Msh6P54276 Icmt-201ENSMUST00000048892 4919 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Msh6P54276 Mrto4-202ENSMUST00000102503 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
Msh6P54276 Dhdds-202ENSMUST00000105885 998 ntTSL 5 BASIC19.57■□□□□ 0.72
Msh6P54276 Gm12008-201ENSMUST00000117791 755 ntBASIC19.57■□□□□ 0.72
Msh6P54276 Platr13-201ENSMUST00000133945 375 ntTSL 5 BASIC19.57■□□□□ 0.72
Msh6P54276 Ube2i-208ENSMUST00000173084 1286 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Msh6P54276 Tmem86b-204ENSMUST00000206610 522 ntTSL 3 BASIC19.57■□□□□ 0.72
Msh6P54276 Gm11937-201ENSMUST00000076478 396 ntAPPRIS P1 BASIC19.57■□□□□ 0.72
Msh6P54276 Nutf2-201ENSMUST00000008594 948 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Msh6P54276 Foxp4-204ENSMUST00000113265 3999 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
Msh6P54276 Tex261-201ENSMUST00000014892 2984 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Msh6P54276 App-201ENSMUST00000005406 3176 ntAPPRIS P2 TSL 1 (best) BASIC19.57■□□□□ 0.72
Msh6P54276 Ythdf3-201ENSMUST00000108345 5102 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Msh6P54276 Gch1-201ENSMUST00000089959 2775 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Msh6P54276 Tm9sf1-203ENSMUST00000121791 2148 ntAPPRIS P1 TSL 5 BASIC19.57■□□□□ 0.72
Msh6P54276 Fam171a1-204ENSMUST00000115099 4149 ntAPPRIS P3 TSL 1 (best) BASIC19.57■□□□□ 0.72
Msh6P54276 Ccnyl1-202ENSMUST00000114077 3281 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Msh6P54276 Fbxo44-202ENSMUST00000105705 1034 ntTSL 2 BASIC19.57■□□□□ 0.72
Msh6P54276 Kir3dl1-201ENSMUST00000113104 1031 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Msh6P54276 Eef1akmt4-201ENSMUST00000115522 1130 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Msh6P54276 Gm9385-201ENSMUST00000117563 472 ntBASIC19.57■□□□□ 0.72
Msh6P54276 Gm16198-201ENSMUST00000118766 670 ntBASIC19.57■□□□□ 0.72
Msh6P54276 Rps15-ps2-201ENSMUST00000121788 438 ntBASIC19.57■□□□□ 0.72
Msh6P54276 Zfp715-201ENSMUST00000012796 907 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Msh6P54276 2410080I02Rik-201ENSMUST00000142712 414 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Msh6P54276 AC124732.2-201ENSMUST00000221977 316 ntBASIC19.57■□□□□ 0.72
Msh6P54276 AC126408.1-201ENSMUST00000225184 523 ntBASIC19.57■□□□□ 0.72
Msh6P54276 Bend5-201ENSMUST00000030274 1826 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Msh6P54276 Fam110a-201ENSMUST00000062047 1754 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Msh6P54276 Bnip2-202ENSMUST00000085393 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
Msh6P54276 Kif22-201ENSMUST00000032915 2115 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Msh6P54276 Dcp1b-201ENSMUST00000073909 1748 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
Msh6P54276 Mag-203ENSMUST00000187137 2434 ntAPPRIS P2 TSL 1 (best) BASIC19.56■□□□□ 0.72
Msh6P54276 Ldb3-208ENSMUST00000228044 1883 ntAPPRIS ALT2 BASIC19.56■□□□□ 0.72
Msh6P54276 Tcf3-207ENSMUST00000105343 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
Msh6P54276 Renbp-201ENSMUST00000114379 1318 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Msh6P54276 Rcor1-202ENSMUST00000116388 2720 ntAPPRIS P2 TSL 1 (best) BASIC19.56■□□□□ 0.72
Msh6P54276 Map3k10-202ENSMUST00000108341 3403 ntAPPRIS ALT2 TSL 5 BASIC19.56■□□□□ 0.72
Msh6P54276 Gfm2-211ENSMUST00000161913 1829 ntTSL 2 BASIC19.56■□□□□ 0.72
Msh6P54276 Aste1-202ENSMUST00000123807 2349 ntAPPRIS ALT2 TSL 2 BASIC19.56■□□□□ 0.72
Msh6P54276 Crocc-202ENSMUST00000097816 6273 ntTSL 5 BASIC19.56■□□□□ 0.72
Msh6P54276 Mbp-206ENSMUST00000102812 2108 ntAPPRIS ALT2 TSL 2 BASIC19.56■□□□□ 0.72
Msh6P54276 Olfr55-201ENSMUST00000112168 948 ntAPPRIS P1 BASIC19.56■□□□□ 0.72
Msh6P54276 Il15ra-206ENSMUST00000114834 784 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
Msh6P54276 Ahr-202ENSMUST00000116436 5548 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Msh6P54276 Bricd5-202ENSMUST00000164508 701 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Msh6P54276 Hddc3-206ENSMUST00000206074 565 ntTSL 2 BASIC19.56■□□□□ 0.72
Msh6P54276 Cyhr1-201ENSMUST00000066677 1163 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Msh6P54276 Ckap4-201ENSMUST00000053871 3089 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Msh6P54276 Ranbp9-201ENSMUST00000144326 3371 ntAPPRIS P2 TSL 5 BASIC19.55■□□□□ 0.72
Msh6P54276 Alx1-204ENSMUST00000217946 1542 ntTSL 5 BASIC19.55■□□□□ 0.72
Msh6P54276 Rps6kl1-201ENSMUST00000019379 2304 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Msh6P54276 Gadd45gip1-201ENSMUST00000036734 2494 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Msh6P54276 Tbc1d19-201ENSMUST00000037337 2273 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Msh6P54276 Thap6-204ENSMUST00000193925 1337 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Msh6P54276 Leprotl1-201ENSMUST00000033910 2879 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Msh6P54276 4732440D04Rik-203ENSMUST00000191825 5428 ntBASIC19.55■□□□□ 0.72
Msh6P54276 Lyrm1-203ENSMUST00000106517 1279 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Msh6P54276 Rab17-204ENSMUST00000131428 1557 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Msh6P54276 5430405H02Rik-203ENSMUST00000185402 904 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Msh6P54276 Bpnt1-205ENSMUST00000210277 1226 ntTSL 5 BASIC19.55■□□□□ 0.72
Msh6P54276 Eif2b1-201ENSMUST00000031334 2013 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Msh6P54276 Col13a1-203ENSMUST00000105452 3037 ntAPPRIS ALT2 TSL 5 BASIC19.55■□□□□ 0.72
Msh6P54276 Acat2-203ENSMUST00000159697 1800 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Msh6P54276 Htatsf1-201ENSMUST00000088652 2810 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Msh6P54276 Trnt1-203ENSMUST00000113248 1398 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Msh6P54276 Gm34016-201ENSMUST00000222678 1384 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Msh6P54276 Mkrn3-201ENSMUST00000094340 2547 ntAPPRIS P1 BASIC19.54■□□□□ 0.72
Msh6P54276 Pias3-201ENSMUST00000064900 2931 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Retrieved 100 of 76,532 protein–RNA pairs in 36.2 ms