Protein–RNA interactions for Protein: P50284

Ltbr, Tumor necrosis factor receptor superfamily member 3, mousemouse

Predictions only

Length 415 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LtbrP50284 Cpne6-207ENSMUST00000171643 2016 ntAPPRIS P3 TSL 5 BASIC18.2■□□□□ 0.5
LtbrP50284 0610009E02Rik-201ENSMUST00000133463 1609 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
LtbrP50284 Bend6-204ENSMUST00000129464 1750 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
LtbrP50284 Tfap2b-202ENSMUST00000064976 1946 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
LtbrP50284 Apeh-206ENSMUST00000193254 2518 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
LtbrP50284 Pde8b-201ENSMUST00000022192 2517 ntAPPRIS ALT2 TSL 5 BASIC18.19■□□□□ 0.5
LtbrP50284 Gm43072-201ENSMUST00000200283 1671 ntBASIC18.19■□□□□ 0.5
LtbrP50284 Cyp46a1-201ENSMUST00000021684 2118 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
LtbrP50284 Rgs9-201ENSMUST00000020920 2434 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
LtbrP50284 Cactin-201ENSMUST00000050867 2715 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
LtbrP50284 Gm15655-201ENSMUST00000134649 440 ntTSL 2 BASIC18.19■□□□□ 0.5
LtbrP50284 Gm15201-201ENSMUST00000136472 1210 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
LtbrP50284 Dusp3-205ENSMUST00000143177 391 ntTSL 3 BASIC18.19■□□□□ 0.5
LtbrP50284 Mpped1-210ENSMUST00000172115 795 ntTSL 3 BASIC18.19■□□□□ 0.5
LtbrP50284 Mpped1-211ENSMUST00000172398 795 ntTSL 3 BASIC18.19■□□□□ 0.5
LtbrP50284 Gm29683-202ENSMUST00000208511 720 ntTSL 3 BASIC18.19■□□□□ 0.5
LtbrP50284 Cd302-201ENSMUST00000028356 1257 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
LtbrP50284 Pak1ip1-201ENSMUST00000046951 1722 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
LtbrP50284 Tmem107-202ENSMUST00000094081 1263 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
LtbrP50284 Ptprn-201ENSMUST00000027404 3554 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
LtbrP50284 Utp3-201ENSMUST00000090413 1629 ntAPPRIS P1 BASIC18.19■□□□□ 0.5
LtbrP50284 Esrrb-206ENSMUST00000167891 1344 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
LtbrP50284 Clvs2-203ENSMUST00000160299 2610 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
LtbrP50284 Gm14634-201ENSMUST00000139163 1662 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
LtbrP50284 Lefty2-201ENSMUST00000085797 2473 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
LtbrP50284 5730480H06Rik-205ENSMUST00000196950 3300 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
LtbrP50284 Ubap1-202ENSMUST00000108060 2514 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
LtbrP50284 Dnajb11-204ENSMUST00000166487 2534 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
LtbrP50284 Noc4l-201ENSMUST00000042147 2075 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
LtbrP50284 Alkbh2-202ENSMUST00000112279 899 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
LtbrP50284 Cmc2-202ENSMUST00000128304 394 ntTSL 5 BASIC18.18■□□□□ 0.5
LtbrP50284 Gm11505-201ENSMUST00000130442 737 ntTSL 3 BASIC18.18■□□□□ 0.5
LtbrP50284 Gm34866-201ENSMUST00000196146 515 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
LtbrP50284 Gm20553-201ENSMUST00000204205 844 ntBASIC18.18■□□□□ 0.5
LtbrP50284 Mlnr-ps-201ENSMUST00000208959 969 ntBASIC18.18■□□□□ 0.5
LtbrP50284 2900055J20Rik-201ENSMUST00000096572 723 ntAPPRIS P1 BASIC18.18■□□□□ 0.5
LtbrP50284 Gprc5b-201ENSMUST00000008878 4518 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
LtbrP50284 Sctr-202ENSMUST00000189037 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
LtbrP50284 Casq1-201ENSMUST00000003554 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
LtbrP50284 Trmt2a-203ENSMUST00000115640 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
LtbrP50284 AC132265.1-201ENSMUST00000219233 1665 ntBASIC18.18■□□□□ 0.5
LtbrP50284 Pard3-226ENSMUST00000162907 4682 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
LtbrP50284 Gm12355-201ENSMUST00000104933 1311 ntAPPRIS P1 BASIC18.18■□□□□ 0.5
LtbrP50284 Gm5366-201ENSMUST00000215494 1338 ntBASIC18.18■□□□□ 0.5
LtbrP50284 Ppp1r1a-201ENSMUST00000023133 1306 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
LtbrP50284 1700051A21Rik-201ENSMUST00000147937 1516 ntTSL 5 BASIC18.18■□□□□ 0.5
LtbrP50284 Nubpl-201ENSMUST00000040090 2987 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
LtbrP50284 Il7-203ENSMUST00000192202 2057 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
LtbrP50284 Anp32a-201ENSMUST00000085519 2113 ntAPPRIS P2 TSL 1 (best) BASIC18.17■□□□□ 0.5
LtbrP50284 Mfhas1-201ENSMUST00000037666 6408 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
LtbrP50284 Mtmr3-202ENSMUST00000109943 5674 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
LtbrP50284 P3h1-201ENSMUST00000030393 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
LtbrP50284 Sucla2-203ENSMUST00000160507 2229 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
LtbrP50284 Tnfrsf13b-202ENSMUST00000101103 750 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
LtbrP50284 Gm12953-201ENSMUST00000138426 751 ntTSL 2 BASIC18.17■□□□□ 0.5
LtbrP50284 Pfdn6-204ENSMUST00000174048 560 ntAPPRIS P1 TSL 2 BASIC18.17■□□□□ 0.5
LtbrP50284 Mrpl4-201ENSMUST00000003386 1288 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
LtbrP50284 Hist1h3c-201ENSMUST00000091752 630 ntAPPRIS P1 BASIC18.17■□□□□ 0.5
LtbrP50284 Tnfaip2-202ENSMUST00000109792 3284 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
LtbrP50284 Acap3-201ENSMUST00000079031 4301 ntTSL 5 BASIC18.17■□□□□ 0.5
LtbrP50284 Asap2-201ENSMUST00000050990 3345 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
LtbrP50284 Gm19430-201ENSMUST00000193847 2137 ntBASIC18.17■□□□□ 0.5
LtbrP50284 Gm45844-204ENSMUST00000209833 1524 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
LtbrP50284 Prkar2b-202ENSMUST00000036497 3378 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
LtbrP50284 Ppp2r2a-204ENSMUST00000225380 1988 ntBASIC18.17■□□□□ 0.5
LtbrP50284 Pnkp-202ENSMUST00000098478 1550 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
LtbrP50284 Cntln-201ENSMUST00000047023 5528 ntAPPRIS ALT2 TSL 5 BASIC18.16■□□□□ 0.5
LtbrP50284 Anks6-201ENSMUST00000084616 3552 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
LtbrP50284 Naprt-201ENSMUST00000023237 1890 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
LtbrP50284 Usp36-201ENSMUST00000092382 5609 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
LtbrP50284 Chst3-203ENSMUST00000167915 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
LtbrP50284 Grb7-201ENSMUST00000019456 2397 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
LtbrP50284 Rmnd5b-201ENSMUST00000001081 1946 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
LtbrP50284 Ptbp2-213ENSMUST00000200097 3777 ntAPPRIS ALT1 TSL 1 (best) BASIC18.16■□□□□ 0.5
LtbrP50284 Sort1-201ENSMUST00000102632 6796 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
LtbrP50284 Trbc1-201ENSMUST00000103291 512 ntAPPRIS P1 BASIC18.16■□□□□ 0.5
LtbrP50284 Trbc2-201ENSMUST00000103299 692 ntAPPRIS P1 BASIC18.16■□□□□ 0.5
LtbrP50284 Gm13323-201ENSMUST00000120245 1151 ntBASIC18.16■□□□□ 0.5
LtbrP50284 Mmab-203ENSMUST00000123256 1277 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
LtbrP50284 Ccl25-205ENSMUST00000127460 867 ntAPPRIS ALT2 TSL 5 BASIC18.16■□□□□ 0.5
LtbrP50284 Grip1os3-202ENSMUST00000146294 957 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
LtbrP50284 Gm10244-202ENSMUST00000156905 474 ntTSL 3 BASIC18.16■□□□□ 0.5
LtbrP50284 Prss47-201ENSMUST00000182457 828 ntAPPRIS ALT2 TSL 5 BASIC18.16■□□□□ 0.5
LtbrP50284 Gm27430-201ENSMUST00000184585 107 ntBASIC18.16■□□□□ 0.5
LtbrP50284 Gm28237-202ENSMUST00000189477 748 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
LtbrP50284 Gm44333-201ENSMUST00000197168 107 ntBASIC18.16■□□□□ 0.5
LtbrP50284 Gm7774-201ENSMUST00000200064 533 ntBASIC18.16■□□□□ 0.5
LtbrP50284 9230110C19Rik-202ENSMUST00000215478 533 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
LtbrP50284 Tex12-202ENSMUST00000217236 1003 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
LtbrP50284 AC153937.1-201ENSMUST00000218734 412 ntBASIC18.16■□□□□ 0.5
LtbrP50284 AC121788.1-202ENSMUST00000218801 871 ntTSL 5 BASIC18.16■□□□□ 0.5
LtbrP50284 Kcnj14-201ENSMUST00000071937 2681 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
LtbrP50284 Pofut2-201ENSMUST00000020493 2290 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
LtbrP50284 Rabggta-203ENSMUST00000169237 2547 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
LtbrP50284 Gm38392-202ENSMUST00000165196 1303 ntAPPRIS P5 TSL 5 BASIC18.16■□□□□ 0.5
LtbrP50284 Rnf170-209ENSMUST00000209300 1881 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
LtbrP50284 Rasgef1c-202ENSMUST00000093141 2120 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
LtbrP50284 Adgrl1-207ENSMUST00000141158 8181 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
LtbrP50284 Ehmt2-202ENSMUST00000078061 3746 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
LtbrP50284 Serpine2-201ENSMUST00000027467 2210 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Retrieved 100 of 76,532 protein–RNA pairs in 32 ms