Protein–RNA interactions for Protein: P48754

Brca1, Breast cancer type 1 susceptibility protein homolog, mousemouse

Predictions only

Length 1,812 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Brca1P48754 Ldb3-208ENSMUST00000228044 1883 ntAPPRIS ALT2 BASIC17.25■□□□□ 0.35
Brca1P48754 Golt1a-201ENSMUST00000094557 1865 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Brca1P48754 Wt1-205ENSMUST00000143043 3090 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Brca1P48754 Plppr3-207ENSMUST00000167250 3063 ntAPPRIS ALT2 TSL 2 BASIC17.24■□□□□ 0.35
Brca1P48754 Mdm1-208ENSMUST00000219087 1318 ntTSL 2 BASIC17.24■□□□□ 0.35
Brca1P48754 Abhd16b-201ENSMUST00000069649 1775 ntAPPRIS P1 BASIC17.24■□□□□ 0.35
Brca1P48754 Tpd52-206ENSMUST00000121038 849 ntTSL 5 BASIC17.24■□□□□ 0.35
Brca1P48754 Pkig-209ENSMUST00000164399 983 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
Brca1P48754 AL593843.1-201ENSMUST00000195891 145 ntBASIC17.24■□□□□ 0.35
Brca1P48754 Nradd-201ENSMUST00000035069 1223 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Brca1P48754 Clec4g-202ENSMUST00000062037 1242 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Brca1P48754 Gpc5-202ENSMUST00000175665 2187 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Brca1P48754 B3gnt6-201ENSMUST00000098278 2371 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Brca1P48754 Sh2b3-201ENSMUST00000040308 2530 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
Brca1P48754 Pik3r2-201ENSMUST00000034296 3165 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Brca1P48754 Astn2-202ENSMUST00000084496 4675 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
Brca1P48754 Spsb1-203ENSMUST00000105685 1537 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Brca1P48754 Hnrnph2-201ENSMUST00000050331 1701 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
Brca1P48754 Tmod2-208ENSMUST00000215614 1921 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Brca1P48754 Sybu-203ENSMUST00000110269 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Brca1P48754 Gal3st4-202ENSMUST00000161279 2059 ntAPPRIS P3 TSL 3 BASIC17.24■□□□□ 0.35
Brca1P48754 Noc4l-201ENSMUST00000042147 2075 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Brca1P48754 Haus1-201ENSMUST00000048192 1004 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Brca1P48754 Klf14-201ENSMUST00000101589 3056 ntAPPRIS P1 BASIC17.23■□□□□ 0.35
Brca1P48754 Lgr4-201ENSMUST00000046548 5060 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
Brca1P48754 Mapk8ip1-201ENSMUST00000050312 2930 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
Brca1P48754 Syt7-204ENSMUST00000223586 1344 ntBASIC17.23■□□□□ 0.35
Brca1P48754 Gm43072-201ENSMUST00000200283 1671 ntBASIC17.23■□□□□ 0.35
Brca1P48754 Vrk3-201ENSMUST00000002275 1969 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Brca1P48754 Fcnb-202ENSMUST00000117486 873 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Brca1P48754 Rps13-ps4-201ENSMUST00000117927 456 ntBASIC17.23■□□□□ 0.35
Brca1P48754 Rps13-ps5-201ENSMUST00000117939 456 ntBASIC17.23■□□□□ 0.35
Brca1P48754 Gm15483-201ENSMUST00000120338 456 ntBASIC17.23■□□□□ 0.35
Brca1P48754 Gm26839-201ENSMUST00000180686 842 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Brca1P48754 Gm27533-201ENSMUST00000183800 152 ntBASIC17.23■□□□□ 0.35
Brca1P48754 Gm37267-201ENSMUST00000194222 681 ntTSL 2 BASIC17.23■□□□□ 0.35
Brca1P48754 Fars2-201ENSMUST00000021857 2125 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Brca1P48754 Cd302-201ENSMUST00000028356 1257 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
Brca1P48754 Gstp2-201ENSMUST00000042700 770 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Brca1P48754 Olfr750-201ENSMUST00000048478 1132 ntAPPRIS P1 BASIC17.23■□□□□ 0.35
Brca1P48754 Men1-201ENSMUST00000056391 2975 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Brca1P48754 Snx16-201ENSMUST00000029047 2288 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
Brca1P48754 Gm5357-201ENSMUST00000212720 1924 ntBASIC17.23■□□□□ 0.35
Brca1P48754 Zfp277-201ENSMUST00000069637 2188 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
Brca1P48754 Gm15998-201ENSMUST00000135144 1844 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Brca1P48754 G3bp2-204ENSMUST00000169094 2716 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
Brca1P48754 Ifrd2-201ENSMUST00000010192 2056 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Brca1P48754 Gm17055-201ENSMUST00000166951 2232 ntTSL 5 BASIC17.22■□□□□ 0.35
Brca1P48754 Dlgap1-206ENSMUST00000133717 2355 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
Brca1P48754 Gm22189-201ENSMUST00000103822 86 ntBASIC17.22■□□□□ 0.35
Brca1P48754 Ctnnbip1-202ENSMUST00000105692 634 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Brca1P48754 Rgs19-203ENSMUST00000108771 1110 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Brca1P48754 Rgs19-205ENSMUST00000108776 1216 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Brca1P48754 Akirin1-ps-201ENSMUST00000119676 458 ntBASIC17.22■□□□□ 0.35
Brca1P48754 Gm12264-201ENSMUST00000123949 500 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Brca1P48754 Hoxa7-202ENSMUST00000134367 807 ntTSL 5 BASIC17.22■□□□□ 0.35
Brca1P48754 Mtmr2-209ENSMUST00000156801 617 ntTSL 5 BASIC17.22■□□□□ 0.35
Brca1P48754 Mrps18c-201ENSMUST00000016977 638 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Brca1P48754 Gsg1l2-202ENSMUST00000181566 1158 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
Brca1P48754 Gm44344-201ENSMUST00000200287 129 ntBASIC17.22■□□□□ 0.35
Brca1P48754 Sppl3-201ENSMUST00000031530 3204 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Brca1P48754 Xrcc1-201ENSMUST00000063249 2155 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Brca1P48754 Rhox9-201ENSMUST00000089062 882 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Brca1P48754 Hps6-201ENSMUST00000099393 2696 ntAPPRIS P1 BASIC17.22■□□□□ 0.35
Brca1P48754 AC131743.5-201ENSMUST00000220775 1618 ntBASIC17.22■□□□□ 0.35
Brca1P48754 9530018F02Rik-201ENSMUST00000219513 2599 ntBASIC17.22■□□□□ 0.35
Brca1P48754 Sept4-201ENSMUST00000018544 1726 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Brca1P48754 Sept11-205ENSMUST00000201700 3478 ntAPPRIS ALT1 TSL 2 BASIC17.22■□□□□ 0.35
Brca1P48754 Gm13233-201ENSMUST00000118760 1443 ntBASIC17.22■□□□□ 0.35
Brca1P48754 Gm13244-201ENSMUST00000118855 1446 ntBASIC17.22■□□□□ 0.35
Brca1P48754 Ngf-202ENSMUST00000106925 1187 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Brca1P48754 Gm12859-201ENSMUST00000117834 427 ntBASIC17.21■□□□□ 0.35
Brca1P48754 Cdpf1-202ENSMUST00000125947 706 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
Brca1P48754 Gm8116-201ENSMUST00000182917 1201 ntBASIC17.21■□□□□ 0.35
Brca1P48754 Ffar3-202ENSMUST00000185748 1234 ntAPPRIS P1 BASIC17.21■□□□□ 0.35
Brca1P48754 Gm38293-201ENSMUST00000193209 600 ntTSL 2 BASIC17.21■□□□□ 0.35
Brca1P48754 Gm8515-201ENSMUST00000194852 576 ntBASIC17.21■□□□□ 0.35
Brca1P48754 Cited1-201ENSMUST00000050551 901 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Brca1P48754 Krtap19-3-201ENSMUST00000075284 526 ntAPPRIS P1 BASIC17.21■□□□□ 0.35
Brca1P48754 Hira-201ENSMUST00000004222 4218 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Brca1P48754 Rbpms-203ENSMUST00000053251 2466 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Brca1P48754 2310022A10Rik-201ENSMUST00000067386 2701 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Brca1P48754 Klhl34-201ENSMUST00000087157 1935 ntAPPRIS P1 BASIC17.21■□□□□ 0.35
Brca1P48754 Arxes2-201ENSMUST00000058119 1532 ntAPPRIS P1 BASIC17.21■□□□□ 0.35
Brca1P48754 Tjap1-214ENSMUST00000225413 2189 ntAPPRIS ALT2 BASIC17.21■□□□□ 0.35
Brca1P48754 Pgap3-202ENSMUST00000090827 2419 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Brca1P48754 Prodh2-201ENSMUST00000058280 1853 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Brca1P48754 Naa30-205ENSMUST00000153488 4446 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Brca1P48754 Slc6a1-204ENSMUST00000204074 1740 ntTSL 5 BASIC17.21■□□□□ 0.35
Brca1P48754 Cyp4f14-202ENSMUST00000179434 2207 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
Brca1P48754 Cyp4f14-201ENSMUST00000054174 2207 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Brca1P48754 Rab3a-204ENSMUST00000110093 1442 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Brca1P48754 Zfp74-203ENSMUST00000108211 1278 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Brca1P48754 Gm15321-201ENSMUST00000121290 288 ntBASIC17.21■□□□□ 0.35
Brca1P48754 Gm12138-201ENSMUST00000122180 951 ntBASIC17.21■□□□□ 0.35
Brca1P48754 1700016P03Rik-201ENSMUST00000134252 863 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Brca1P48754 AC164567.1-201ENSMUST00000219185 960 ntBASIC17.21■□□□□ 0.35
Brca1P48754 Ramp3-201ENSMUST00000045374 1233 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Brca1P48754 Lonp1-201ENSMUST00000047226 2963 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Brca1P48754 Nup37-201ENSMUST00000052355 1267 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Retrieved 100 of 76,532 protein–RNA pairs in 41.3 ms