Protein–RNA interactions for Protein: P46467

Vps4b, Vacuolar protein sorting-associated protein 4B, mousemouse

Known RBP Predictions only

Length 444 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps4bP46467 Ptpa-203ENSMUST00000113603 2169 ntTSL 5 BASIC15.77■□□□□ 0.11
Vps4bP46467 Pcmt1-208ENSMUST00000162606 2757 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.11
Vps4bP46467 Ambra1-205ENSMUST00000111317 4929 ntTSL 5 BASIC15.77■□□□□ 0.11
Vps4bP46467 Tead4-201ENSMUST00000006311 3076 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
Vps4bP46467 Pcdh20-201ENSMUST00000061628 5241 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Vps4bP46467 Asl-205ENSMUST00000161094 1824 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Vps4bP46467 Gm26669-201ENSMUST00000181323 1808 ntTSL 5 BASIC15.77■□□□□ 0.11
Vps4bP46467 Esr1-202ENSMUST00000105588 2733 ntTSL 5 BASIC15.77■□□□□ 0.11
Vps4bP46467 Rcor1-202ENSMUST00000116388 2720 ntAPPRIS P2 TSL 1 (best) BASIC15.77■□□□□ 0.11
Vps4bP46467 Lhx5-201ENSMUST00000031591 2689 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Vps4bP46467 Tmem33-204ENSMUST00000161369 6164 ntAPPRIS P3 TSL 1 (best) BASIC15.77■□□□□ 0.11
Vps4bP46467 Dnm1l-203ENSMUST00000115749 4068 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
Vps4bP46467 Dnm1l-202ENSMUST00000096229 4056 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
Vps4bP46467 Tcf3-210ENSMUST00000105346 2839 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
Vps4bP46467 Fubp3-202ENSMUST00000113482 3268 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Vps4bP46467 Ccbe1-202ENSMUST00000130300 1631 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Vps4bP46467 Hnrnpm-205ENSMUST00000139302 2428 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Vps4bP46467 Coch-202ENSMUST00000164782 2681 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Vps4bP46467 9430015G10Rik-208ENSMUST00000169550 2660 ntAPPRIS P1 TSL 5 BASIC15.76■□□□□ 0.11
Vps4bP46467 Safb-207ENSMUST00000182533 3122 ntAPPRIS ALT2 TSL 5 BASIC15.76■□□□□ 0.11
Vps4bP46467 Zfp821-203ENSMUST00000212000 2081 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Vps4bP46467 Fyn-201ENSMUST00000063091 3562 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Vps4bP46467 Gm11729-201ENSMUST00000124901 713 ntTSL 3 BASIC15.76■□□□□ 0.11
Vps4bP46467 Gm17112-201ENSMUST00000163194 432 ntTSL 3 BASIC15.76■□□□□ 0.11
Vps4bP46467 Gm8349-201ENSMUST00000182720 1003 ntBASIC15.76■□□□□ 0.11
Vps4bP46467 Gm9172-201ENSMUST00000212092 954 ntBASIC15.76■□□□□ 0.11
Vps4bP46467 AC133598.3-202ENSMUST00000224219 531 ntBASIC15.76■□□□□ 0.11
Vps4bP46467 Kif12-205ENSMUST00000156618 2258 ntAPPRIS ALT2 TSL 5 BASIC15.76■□□□□ 0.11
Vps4bP46467 Gadd45gip1-201ENSMUST00000036734 2494 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Vps4bP46467 Pld4-201ENSMUST00000063888 1982 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Vps4bP46467 Ptgs1-201ENSMUST00000062069 2867 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Vps4bP46467 Mbtps2-201ENSMUST00000058098 4797 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Vps4bP46467 Pxk-205ENSMUST00000225653 2765 ntAPPRIS P2 BASIC15.75■□□□□ 0.11
Vps4bP46467 Ppt2-205ENSMUST00000169067 1392 ntAPPRIS P1 TSL 5 BASIC15.75■□□□□ 0.11
Vps4bP46467 Zbtb46-205ENSMUST00000180222 2014 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Vps4bP46467 Ghrhr-201ENSMUST00000063578 1550 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Vps4bP46467 Rbm42-202ENSMUST00000108141 1526 ntAPPRIS ALT2 TSL 5 BASIC15.75■□□□□ 0.11
Vps4bP46467 Matk-203ENSMUST00000119547 1916 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
Vps4bP46467 Srpx-202ENSMUST00000115543 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
Vps4bP46467 Gm16181-201ENSMUST00000118793 567 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Vps4bP46467 Gm44771-201ENSMUST00000206975 626 ntBASIC15.75■□□□□ 0.11
Vps4bP46467 1700016B15Rik-201ENSMUST00000209027 733 ntBASIC15.75■□□□□ 0.11
Vps4bP46467 1700022H01Rik-201ENSMUST00000219142 387 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Vps4bP46467 Tctex1d4-201ENSMUST00000062206 990 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Vps4bP46467 Btaf1-201ENSMUST00000099494 7204 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Vps4bP46467 Cgnl1-203ENSMUST00000122065 4487 ntAPPRIS P2 TSL 1 (best) BASIC15.75■□□□□ 0.11
Vps4bP46467 Adcy3-204ENSMUST00000127756 4672 ntAPPRIS P3 TSL 5 BASIC15.75■□□□□ 0.11
Vps4bP46467 Usp30-201ENSMUST00000031588 4604 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Vps4bP46467 Prkab2-201ENSMUST00000045743 5006 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Vps4bP46467 Kitl-202ENSMUST00000105283 5648 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Vps4bP46467 Col13a1-205ENSMUST00000105454 3162 ntAPPRIS P2 TSL 1 (best) BASIC15.75■□□□□ 0.11
Vps4bP46467 Smarcd1-201ENSMUST00000023759 3153 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Vps4bP46467 Fndc3a-201ENSMUST00000089017 6143 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Vps4bP46467 Asf1b-201ENSMUST00000005607 1788 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Vps4bP46467 Pitpnm1-202ENSMUST00000100022 4512 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Vps4bP46467 Dnm2-211ENSMUST00000173397 3510 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
Vps4bP46467 Gba2-201ENSMUST00000030189 3544 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Vps4bP46467 Safb-201ENSMUST00000095224 3106 ntAPPRIS P2 TSL 5 BASIC15.74■□□□□ 0.11
Vps4bP46467 Stat3-207ENSMUST00000138438 2506 ntTSL 5 BASIC15.74■□□□□ 0.11
Vps4bP46467 Denr-201ENSMUST00000023869 2339 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Vps4bP46467 Mfge8-201ENSMUST00000032825 2125 ntAPPRIS P3 TSL 1 (best) BASIC15.74■□□□□ 0.11
Vps4bP46467 Strn4-202ENSMUST00000108495 3082 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
Vps4bP46467 Hs3st5-201ENSMUST00000058738 3078 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Vps4bP46467 Cr1l-208ENSMUST00000194111 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
Vps4bP46467 Gm38392-202ENSMUST00000165196 1303 ntAPPRIS P5 TSL 5 BASIC15.74■□□□□ 0.11
Vps4bP46467 Rfc5-201ENSMUST00000086461 2796 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Vps4bP46467 Fam103a1-201ENSMUST00000042166 1452 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Vps4bP46467 Nap1l5-201ENSMUST00000059539 1844 ntAPPRIS P1 BASIC15.74■□□□□ 0.11
Vps4bP46467 2310009B15Rik-201ENSMUST00000112025 565 ntAPPRIS P1 TSL 2 BASIC15.74■□□□□ 0.11
Vps4bP46467 Dguok-202ENSMUST00000113888 1007 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Vps4bP46467 Uqcc2-203ENSMUST00000119227 452 ntTSL 3 BASIC15.74■□□□□ 0.11
Vps4bP46467 Gm16075-201ENSMUST00000135873 361 ntTSL 3 BASIC15.74■□□□□ 0.11
Vps4bP46467 Dguok-201ENSMUST00000014698 1107 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Vps4bP46467 Aicda-202ENSMUST00000160685 1292 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Vps4bP46467 Mir3081-201ENSMUST00000175305 84 ntBASIC15.74■□□□□ 0.11
Vps4bP46467 Gm44454-201ENSMUST00000198541 138 ntBASIC15.74■□□□□ 0.11
Vps4bP46467 Gm43077-201ENSMUST00000200602 491 ntTSL 3 BASIC15.74■□□□□ 0.11
Vps4bP46467 Shc3-203ENSMUST00000223543 1241 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Vps4bP46467 AC127349.1-201ENSMUST00000224590 266 ntBASIC15.74■□□□□ 0.11
Vps4bP46467 Spire2-202ENSMUST00000212404 2158 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Vps4bP46467 Acot4-201ENSMUST00000021652 6203 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Vps4bP46467 Spag16-201ENSMUST00000065425 2126 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Vps4bP46467 Zbed5-201ENSMUST00000041466 2492 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Vps4bP46467 Adgrb2-208ENSMUST00000121049 4871 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
Vps4bP46467 Stk40-201ENSMUST00000094761 3492 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Vps4bP46467 Celf3-204ENSMUST00000197558 2414 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Vps4bP46467 Naa50-203ENSMUST00000159514 3756 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Vps4bP46467 Il10rb-201ENSMUST00000023691 1850 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Vps4bP46467 Hacd3-201ENSMUST00000036615 2709 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Vps4bP46467 Bclaf3-202ENSMUST00000112464 3366 ntAPPRIS P2 TSL 1 (best) BASIC15.73■□□□□ 0.11
Vps4bP46467 Rpl5-201ENSMUST00000082223 2045 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Vps4bP46467 Siglece-201ENSMUST00000032667 1849 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Vps4bP46467 Kmt5b-213ENSMUST00000176262 3933 ntAPPRIS P3 TSL 5 BASIC15.73■□□□□ 0.11
Vps4bP46467 Gm15939-201ENSMUST00000160756 2147 ntTSL 5 BASIC15.73■□□□□ 0.11
Vps4bP46467 Diaph2-201ENSMUST00000037854 3742 ntAPPRIS P2 TSL 1 (best) BASIC15.73■□□□□ 0.11
Vps4bP46467 Ctnna2-205ENSMUST00000161846 4018 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Vps4bP46467 Gm4609-201ENSMUST00000106443 1002 ntBASIC15.73■□□□□ 0.11
Vps4bP46467 Gm5138-201ENSMUST00000113842 1002 ntBASIC15.73■□□□□ 0.11
Vps4bP46467 Gm15191-201ENSMUST00000117933 1000 ntBASIC15.73■□□□□ 0.11
Vps4bP46467 Gm12182-201ENSMUST00000118655 1008 ntBASIC15.73■□□□□ 0.11
Retrieved 100 of 76,532 protein–RNA pairs in 21.9 ms