Protein–RNA interactions for Protein: P43277

Hist1h1d, Histone H1.3, mousemouse

Known RBP Predictions only

Length 221 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hist1h1dP43277 Rnf121-202ENSMUST00000096639 2249 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Hist1h1dP43277 Wfikkn1-201ENSMUST00000095487 1981 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Hist1h1dP43277 Gigyf1-201ENSMUST00000031727 5440 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Hist1h1dP43277 Nabp1-201ENSMUST00000027279 2838 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Hist1h1dP43277 Fbxl18-201ENSMUST00000035985 2831 ntAPPRIS P2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Hist1h1dP43277 Ica1l-201ENSMUST00000027172 3650 ntAPPRIS P2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Hist1h1dP43277 Slc41a3-202ENSMUST00000044019 2412 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Hist1h1dP43277 Cgnl1-203ENSMUST00000122065 4487 ntAPPRIS P2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Hist1h1dP43277 Dnase1l2-201ENSMUST00000088506 1921 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Hist1h1dP43277 Crb2-201ENSMUST00000050372 6372 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
Hist1h1dP43277 Prrt2-201ENSMUST00000159916 2501 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
Hist1h1dP43277 Bri3bp-201ENSMUST00000049040 6473 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Hist1h1dP43277 Alx4-201ENSMUST00000042078 5253 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Hist1h1dP43277 Sgpp1-202ENSMUST00000220285 3200 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Hist1h1dP43277 Bbs10-201ENSMUST00000040454 2744 ntAPPRIS P1 TSL 2 BASIC13.15□□□□□ -0.3
Hist1h1dP43277 Usp31-201ENSMUST00000046929 10198 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
Hist1h1dP43277 Psmd5-201ENSMUST00000028225 4397 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Hist1h1dP43277 Sympk-201ENSMUST00000023882 4116 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Hist1h1dP43277 Cr1l-208ENSMUST00000194111 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Hist1h1dP43277 Cdadc1-204ENSMUST00000171683 1892 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Hist1h1dP43277 Csrnp1-203ENSMUST00000214058 2241 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Hist1h1dP43277 Plxnc1-201ENSMUST00000099337 7302 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Hist1h1dP43277 Asnsd1-202ENSMUST00000123519 983 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Hist1h1dP43277 Calu-208ENSMUST00000173694 611 ntTSL 5 BASIC13.15□□□□□ -0.3
Hist1h1dP43277 Spata25-201ENSMUST00000017911 786 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Hist1h1dP43277 Gm37280-201ENSMUST00000194583 375 ntTSL 3 BASIC13.15□□□□□ -0.3
Hist1h1dP43277 Stum-205ENSMUST00000211561 1063 ntAPPRIS ALT1 TSL 5 BASIC13.15□□□□□ -0.3
Hist1h1dP43277 Gm10358-201ENSMUST00000212864 1250 ntAPPRIS P1 BASIC13.15□□□□□ -0.3
Hist1h1dP43277 Gm32151-201ENSMUST00000223521 915 ntTSL 5 BASIC13.15□□□□□ -0.3
Hist1h1dP43277 3830406C13Rik-207ENSMUST00000223927 1010 ntBASIC13.15□□□□□ -0.3
Hist1h1dP43277 Cltb-201ENSMUST00000049575 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Hist1h1dP43277 Nkx2-9-201ENSMUST00000072631 1264 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Hist1h1dP43277 Vpreb1-201ENSMUST00000075017 766 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Hist1h1dP43277 Cops9-201ENSMUST00000097642 438 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Hist1h1dP43277 Pak1ip1-201ENSMUST00000046951 1722 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Hist1h1dP43277 Anks1b-202ENSMUST00000099366 2549 ntTSL 5 BASIC13.15□□□□□ -0.3
Hist1h1dP43277 Btaf1-201ENSMUST00000099494 7204 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Hist1h1dP43277 Ddi2-201ENSMUST00000102484 9553 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Hist1h1dP43277 Klc1-203ENSMUST00000120544 2261 ntAPPRIS ALT1 TSL 5 BASIC13.15□□□□□ -0.3
Hist1h1dP43277 Lmbr1-204ENSMUST00000198105 2274 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Hist1h1dP43277 Cyp2ab1-201ENSMUST00000023513 2720 ntTSL 5 BASIC13.15□□□□□ -0.3
Hist1h1dP43277 Adat2-201ENSMUST00000019944 1466 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Hist1h1dP43277 Fbxl8-201ENSMUST00000036221 1901 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Hist1h1dP43277 Pitpnm1-202ENSMUST00000100022 4512 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Hist1h1dP43277 4933421O10Rik-201ENSMUST00000155691 3847 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Hist1h1dP43277 Mrap2-203ENSMUST00000179313 2039 ntAPPRIS P1 TSL 2 BASIC13.15□□□□□ -0.3
Hist1h1dP43277 Poli-201ENSMUST00000043286 2591 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Hist1h1dP43277 Disc1-208ENSMUST00000122389 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.31
Hist1h1dP43277 Abr-203ENSMUST00000094012 5236 ntTSL 1 (best) BASIC13.15□□□□□ -0.31
Hist1h1dP43277 Dlg5-202ENSMUST00000073687 7784 ntTSL 1 (best) BASIC13.15□□□□□ -0.31
Hist1h1dP43277 Prkcz2-201ENSMUST00000206136 1756 ntBASIC13.15□□□□□ -0.31
Hist1h1dP43277 Ccdc43-205ENSMUST00000164506 2316 ntAPPRIS ALT1 TSL 5 BASIC13.14□□□□□ -0.31
Hist1h1dP43277 Fubp3-201ENSMUST00000055244 3648 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Hist1h1dP43277 Tspan9-201ENSMUST00000032503 1405 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Hist1h1dP43277 Rpp25-201ENSMUST00000080514 1423 ntAPPRIS P1 BASIC13.14□□□□□ -0.31
Hist1h1dP43277 Mast3-201ENSMUST00000166004 5305 ntAPPRIS ALT2 TSL 5 BASIC13.14□□□□□ -0.31
Hist1h1dP43277 6030419C18Rik-202ENSMUST00000216294 1601 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Hist1h1dP43277 Cask-204ENSMUST00000115438 8366 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Hist1h1dP43277 Ano10-201ENSMUST00000042546 2653 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Hist1h1dP43277 Gm11960-202ENSMUST00000181063 2858 ntBASIC13.14□□□□□ -0.31
Hist1h1dP43277 Naa10-204ENSMUST00000114389 1031 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Hist1h1dP43277 Cldn18-203ENSMUST00000131922 860 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Hist1h1dP43277 Gfod2-203ENSMUST00000155038 951 ntTSL 2 BASIC13.14□□□□□ -0.31
Hist1h1dP43277 Gm7507-201ENSMUST00000183053 1008 ntBASIC13.14□□□□□ -0.31
Hist1h1dP43277 Tnnt2-212ENSMUST00000189732 1123 ntAPPRIS ALT2 TSL 5 BASIC13.14□□□□□ -0.31
Hist1h1dP43277 Gm9745-201ENSMUST00000021573 684 ntAPPRIS P1 TSL 5 BASIC13.14□□□□□ -0.31
Hist1h1dP43277 Coq7-201ENSMUST00000032887 914 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Hist1h1dP43277 Gmnn-201ENSMUST00000006898 1127 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Hist1h1dP43277 Ppt1-202ENSMUST00000097902 1191 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Hist1h1dP43277 Derl1-201ENSMUST00000022993 3175 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Hist1h1dP43277 Ptprt-202ENSMUST00000109442 7719 ntAPPRIS ALT2 TSL 5 BASIC13.14□□□□□ -0.31
Hist1h1dP43277 Fbxl16-201ENSMUST00000045692 3478 ntAPPRIS P1 TSL 5 BASIC13.14□□□□□ -0.31
Hist1h1dP43277 Exoc6-201ENSMUST00000066439 2729 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Hist1h1dP43277 Atp13a3-201ENSMUST00000061350 7220 ntAPPRIS ALT2 TSL 5 BASIC13.14□□□□□ -0.31
Hist1h1dP43277 Trappc12-203ENSMUST00000170994 2818 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Hist1h1dP43277 Ppp2r2c-201ENSMUST00000031003 4088 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Hist1h1dP43277 Gck-202ENSMUST00000109822 1786 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Hist1h1dP43277 Arhgef9-217ENSMUST00000197364 1796 ntTSL 5 BASIC13.14□□□□□ -0.31
Hist1h1dP43277 Ldb3-208ENSMUST00000228044 1883 ntAPPRIS ALT2 BASIC13.14□□□□□ -0.31
Hist1h1dP43277 Csnk1g1-212ENSMUST00000206048 2073 ntAPPRIS ALT2 TSL 5 BASIC13.14□□□□□ -0.31
Hist1h1dP43277 D17Wsu92e-202ENSMUST00000114859 3522 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Hist1h1dP43277 Nup54-201ENSMUST00000038514 2352 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Hist1h1dP43277 Slc43a3-201ENSMUST00000090726 2583 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Hist1h1dP43277 Adam23-204ENSMUST00000114103 2655 ntAPPRIS ALT2 TSL 5 BASIC13.14□□□□□ -0.31
Hist1h1dP43277 Nkx3-1-201ENSMUST00000022646 3195 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Hist1h1dP43277 Hes6-201ENSMUST00000086851 1335 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Hist1h1dP43277 Scaf4-201ENSMUST00000039280 4165 ntAPPRIS P3 TSL 1 (best) BASIC13.13□□□□□ -0.31
Hist1h1dP43277 Ppil1-201ENSMUST00000024802 1434 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Hist1h1dP43277 Dmkn-202ENSMUST00000054427 2034 ntAPPRIS ALT2 TSL 5 BASIC13.13□□□□□ -0.31
Hist1h1dP43277 Gm12522-201ENSMUST00000142833 2439 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Hist1h1dP43277 Tfap2c-201ENSMUST00000030391 2838 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Hist1h1dP43277 Tdrd7-201ENSMUST00000102929 3716 ntAPPRIS P3 TSL 1 (best) BASIC13.13□□□□□ -0.31
Hist1h1dP43277 Senp1-204ENSMUST00000180657 3806 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Hist1h1dP43277 6530402F18Rik-203ENSMUST00000155949 4301 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Hist1h1dP43277 Mars-206ENSMUST00000171564 2962 ntTSL 5 BASIC13.13□□□□□ -0.31
Hist1h1dP43277 Ccdc137-201ENSMUST00000058370 2778 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Hist1h1dP43277 Phf8-204ENSMUST00000112666 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Hist1h1dP43277 Gm14026-201ENSMUST00000120625 1789 ntBASIC13.13□□□□□ -0.31
Hist1h1dP43277 Sgpl1-202ENSMUST00000122259 4102 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Hist1h1dP43277 4930405A21Rik-202ENSMUST00000139042 994 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 30.9 ms