Protein–RNA interactions for Protein: P42586

Nkx2-2, Homeobox protein Nkx-2.2, mousemouse

Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-2P42586 Gjb6-201ENSMUST00000039380 2105 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Nkx2-2P42586 Ptprt-201ENSMUST00000109441 6623 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Nkx2-2P42586 Glb1-201ENSMUST00000063042 2396 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Nkx2-2P42586 Map3k7-201ENSMUST00000037607 5773 ntAPPRIS ALT1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Nkx2-2P42586 Tmem108-204ENSMUST00000189588 2850 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Nkx2-2P42586 Eda-205ENSMUST00000113778 4942 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Nkx2-2P42586 Eda-207ENSMUST00000113780 4915 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Nkx2-2P42586 Eda-208ENSMUST00000113781 4915 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Nkx2-2P42586 Ttll11-202ENSMUST00000112976 3077 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
Nkx2-2P42586 1700020A23Rik-202ENSMUST00000110281 521 ntAPPRIS P1 TSL 3 BASIC14.23□□□□□ -0.13
Nkx2-2P42586 Coa3-201ENSMUST00000017332 886 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Nkx2-2P42586 Gm6376-201ENSMUST00000209407 580 ntBASIC14.23□□□□□ -0.13
Nkx2-2P42586 Gm32050-201ENSMUST00000209793 638 ntTSL 3 BASIC14.23□□□□□ -0.13
Nkx2-2P42586 Zfp995-205ENSMUST00000190066 2221 ntAPPRIS P1 TSL 2 BASIC14.23□□□□□ -0.13
Nkx2-2P42586 Pld4-201ENSMUST00000063888 1982 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Nkx2-2P42586 Galnt13-204ENSMUST00000112636 7530 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Nkx2-2P42586 Papd5-202ENSMUST00000118952 4597 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Nkx2-2P42586 Rgl1-201ENSMUST00000027760 4572 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Nkx2-2P42586 Safb-201ENSMUST00000095224 3106 ntAPPRIS P2 TSL 5 BASIC14.23□□□□□ -0.13
Nkx2-2P42586 Ric1-201ENSMUST00000043610 7190 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
Nkx2-2P42586 Grk6-207ENSMUST00000225925 2769 ntBASIC14.22□□□□□ -0.13
Nkx2-2P42586 Ccdc24-201ENSMUST00000106422 1365 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Nkx2-2P42586 Gm18856-201ENSMUST00000178096 1374 ntBASIC14.22□□□□□ -0.13
Nkx2-2P42586 Snx14-206ENSMUST00000173039 2970 ntTSL 5 BASIC14.22□□□□□ -0.13
Nkx2-2P42586 Gm15998-201ENSMUST00000135144 1844 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Nkx2-2P42586 Foxp4-202ENSMUST00000113262 3198 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Nkx2-2P42586 Foxp4-201ENSMUST00000097311 3197 ntAPPRIS P4 TSL 1 (best) BASIC14.22□□□□□ -0.13
Nkx2-2P42586 Grk3-203ENSMUST00000197776 1570 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Nkx2-2P42586 Iqcd-201ENSMUST00000069259 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Nkx2-2P42586 Pnkp-203ENSMUST00000107876 1770 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Nkx2-2P42586 Plcxd1-201ENSMUST00000086687 1346 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Nkx2-2P42586 Papd4-205ENSMUST00000225868 3081 ntAPPRIS ALT1 BASIC14.22□□□□□ -0.13
Nkx2-2P42586 Acadvl-202ENSMUST00000102574 2168 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Nkx2-2P42586 Maged1-201ENSMUST00000026142 2821 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Nkx2-2P42586 Elmo2-203ENSMUST00000094329 3466 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Nkx2-2P42586 Ablim2-202ENSMUST00000101280 3042 ntTSL 5 BASIC14.22□□□□□ -0.13
Nkx2-2P42586 Tcf25-205ENSMUST00000212470 2572 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Nkx2-2P42586 Scml4-203ENSMUST00000105495 1033 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Nkx2-2P42586 Olfr55-201ENSMUST00000112168 948 ntAPPRIS P1 BASIC14.22□□□□□ -0.13
Nkx2-2P42586 BC022687-202ENSMUST00000177808 1207 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Nkx2-2P42586 Fosb-206ENSMUST00000208446 1090 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Nkx2-2P42586 AC148328.1-201ENSMUST00000216448 920 ntTSL 5 BASIC14.22□□□□□ -0.13
Nkx2-2P42586 Gm33054-201ENSMUST00000216588 313 ntTSL 5 BASIC14.22□□□□□ -0.13
Nkx2-2P42586 Psmb4-201ENSMUST00000005923 1183 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Nkx2-2P42586 Tomm34-201ENSMUST00000018466 2302 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
Nkx2-2P42586 Gm32369-201ENSMUST00000222630 1467 ntTSL 5 BASIC14.22□□□□□ -0.13
Nkx2-2P42586 Pxn-201ENSMUST00000067268 3706 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
Nkx2-2P42586 Prkab1-202ENSMUST00000111999 2026 ntAPPRIS P1 TSL 2 BASIC14.22□□□□□ -0.13
Nkx2-2P42586 Rpn2-201ENSMUST00000029171 2621 ntTSL 5 BASIC14.22□□□□□ -0.13
Nkx2-2P42586 Rock1-201ENSMUST00000067947 6187 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
Nkx2-2P42586 Otol1-201ENSMUST00000053013 2161 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Nkx2-2P42586 Tnip2-202ENSMUST00000087737 1987 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Nkx2-2P42586 Majin-202ENSMUST00000113528 1562 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Nkx2-2P42586 Tmco1-204ENSMUST00000195015 1573 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Nkx2-2P42586 Gstt2-201ENSMUST00000038257 1370 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Nkx2-2P42586 Adgrl1-201ENSMUST00000045393 5643 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
Nkx2-2P42586 Tmem170-201ENSMUST00000034431 3878 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Nkx2-2P42586 Zswim4-201ENSMUST00000039480 4625 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Nkx2-2P42586 Fam161a-205ENSMUST00000172602 1935 ntAPPRIS P1 TSL 2 BASIC14.21□□□□□ -0.13
Nkx2-2P42586 Dmkn-203ENSMUST00000085688 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Nkx2-2P42586 R3hcc1-201ENSMUST00000118374 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Nkx2-2P42586 Ube2d3-208ENSMUST00000197134 2493 ntAPPRIS ALT1 TSL 5 BASIC14.21□□□□□ -0.13
Nkx2-2P42586 Gm3928-201ENSMUST00000121141 1307 ntBASIC14.21□□□□□ -0.13
Nkx2-2P42586 A230087F16Rik-202ENSMUST00000181561 1303 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Nkx2-2P42586 Tcf3-210ENSMUST00000105346 2839 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Nkx2-2P42586 Zfp219-212ENSMUST00000228580 2812 ntAPPRIS ALT2 BASIC14.21□□□□□ -0.13
Nkx2-2P42586 Ccdc158-204ENSMUST00000151180 3352 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Nkx2-2P42586 Adipor1-201ENSMUST00000027727 3123 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Nkx2-2P42586 Rab6a-202ENSMUST00000098252 3110 ntAPPRIS ALT1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Nkx2-2P42586 Jup-202ENSMUST00000107403 2386 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
Nkx2-2P42586 Gm13403-202ENSMUST00000134271 674 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Nkx2-2P42586 Slbp-205ENSMUST00000139518 1191 ntAPPRIS ALT2 TSL 2 BASIC14.21□□□□□ -0.13
Nkx2-2P42586 Gm2308-201ENSMUST00000166539 1004 ntBASIC14.21□□□□□ -0.13
Nkx2-2P42586 Timm10b-211ENSMUST00000210350 529 ntAPPRIS ALT2 TSL 2 BASIC14.21□□□□□ -0.13
Nkx2-2P42586 Ndufb10-201ENSMUST00000045602 732 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Nkx2-2P42586 Slc35c1-202ENSMUST00000125276 2668 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Nkx2-2P42586 Hsd17b4-201ENSMUST00000025385 2684 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Nkx2-2P42586 Btbd1-201ENSMUST00000026093 3001 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Nkx2-2P42586 Gnas-211ENSMUST00000109096 2465 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Nkx2-2P42586 Endov-203ENSMUST00000106245 5126 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Nkx2-2P42586 Pcdhgc4-203ENSMUST00000195239 2272 ntTSL 3 BASIC14.21□□□□□ -0.14
Nkx2-2P42586 Gjb1-201ENSMUST00000052130 1565 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Nkx2-2P42586 Galnt6os-201ENSMUST00000160960 1389 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
Nkx2-2P42586 Fdps-203ENSMUST00000196709 1382 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.14
Nkx2-2P42586 Galnt18-201ENSMUST00000049430 2575 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
Nkx2-2P42586 A230060F14Rik-202ENSMUST00000190739 1889 ntBASIC14.21□□□□□ -0.14
Nkx2-2P42586 Ecm1-201ENSMUST00000029753 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.14
Nkx2-2P42586 Gm16976-202ENSMUST00000127408 1515 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Nkx2-2P42586 Adcy3-207ENSMUST00000152065 4728 ntAPPRIS ALT1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Nkx2-2P42586 Gm45351-201ENSMUST00000210683 2545 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Nkx2-2P42586 Kat2a-201ENSMUST00000006973 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Nkx2-2P42586 Ptpa-203ENSMUST00000113603 2169 ntTSL 5 BASIC14.2□□□□□ -0.14
Nkx2-2P42586 Ovca2-201ENSMUST00000071562 2670 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Nkx2-2P42586 Vangl2-201ENSMUST00000027837 5698 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Nkx2-2P42586 C2cd2l-206ENSMUST00000214602 2808 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Nkx2-2P42586 Mob4-202ENSMUST00000159311 1816 ntTSL 3 BASIC14.2□□□□□ -0.14
Nkx2-2P42586 Hnrnpu-201ENSMUST00000037748 7640 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Nkx2-2P42586 Anapc7-203ENSMUST00000122010 2950 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
Nkx2-2P42586 Med26-201ENSMUST00000058534 2997 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Nkx2-2P42586 Kri1-205ENSMUST00000184326 2490 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 44.3 ms