Protein–RNA interactions for Protein: P41233

Abca1, ATP-binding cassette sub-family A member 1, mousemouse

Predictions only

Length 2,261 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Abca1P41233 1600014C10Rik-207ENSMUST00000179503 784 ntTSL 5 BASIC12.91□□□□□ -0.34
Abca1P41233 Mir6956-201ENSMUST00000183598 62 ntBASIC12.91□□□□□ -0.34
Abca1P41233 Ly6k-201ENSMUST00000060301 791 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Abca1P41233 Cspg5-204ENSMUST00000197850 7868 ntAPPRIS ALT2 TSL 5 BASIC12.91□□□□□ -0.34
Abca1P41233 Dhx9-201ENSMUST00000042141 4616 ntAPPRIS ALT2 TSL 5 BASIC12.9□□□□□ -0.34
Abca1P41233 Naa35-201ENSMUST00000022038 3793 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Abca1P41233 P2rx6-203ENSMUST00000171002 1353 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Abca1P41233 Adprhl1-201ENSMUST00000033825 1372 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Abca1P41233 Rb1cc1-201ENSMUST00000027040 7607 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Abca1P41233 Ehd4-201ENSMUST00000028755 3730 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Abca1P41233 Dio1-202ENSMUST00000106748 396 ntTSL 5 BASIC12.9□□□□□ -0.34
Abca1P41233 Slc25a5-201ENSMUST00000016463 1240 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Abca1P41233 Gm27494-201ENSMUST00000184735 189 ntBASIC12.9□□□□□ -0.34
Abca1P41233 Dlgap3-202ENSMUST00000106092 2901 ntTSL 5 BASIC12.9□□□□□ -0.34
Abca1P41233 Stard7-202ENSMUST00000110375 3116 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Abca1P41233 Pex11a-201ENSMUST00000032761 2241 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Abca1P41233 Mapk8ip3-205ENSMUST00000119115 4173 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Abca1P41233 Zfp764-201ENSMUST00000059199 2508 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Abca1P41233 Fam103a1-202ENSMUST00000118190 1391 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Abca1P41233 Ankra2-201ENSMUST00000022164 1755 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Abca1P41233 Rsph3a-201ENSMUST00000097423 2189 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Abca1P41233 Rab11fip4-201ENSMUST00000017783 7156 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Abca1P41233 Lrp10-201ENSMUST00000022782 4228 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Abca1P41233 Malsu1-203ENSMUST00000128616 2819 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Abca1P41233 Rexo1-201ENSMUST00000057910 5250 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Abca1P41233 Fubp3-202ENSMUST00000113482 3268 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Abca1P41233 Zfp606-201ENSMUST00000098822 4748 ntAPPRIS P3 TSL 1 (best) BASIC12.9□□□□□ -0.34
Abca1P41233 Nyap1-201ENSMUST00000061789 3912 ntAPPRIS P3 TSL 5 BASIC12.9□□□□□ -0.34
Abca1P41233 Gm27029-201ENSMUST00000107257 1898 ntAPPRIS ALT2 TSL 5 BASIC12.9□□□□□ -0.34
Abca1P41233 Safb-207ENSMUST00000182533 3122 ntAPPRIS ALT2 TSL 5 BASIC12.9□□□□□ -0.34
Abca1P41233 Zfc3h1-201ENSMUST00000036044 6957 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.35
Abca1P41233 Gm14057-201ENSMUST00000120631 482 ntBASIC12.9□□□□□ -0.35
Abca1P41233 Cox7a2l-201ENSMUST00000025095 1078 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.35
Abca1P41233 Ifi27-204ENSMUST00000079294 963 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.35
Abca1P41233 Golga7b-201ENSMUST00000087123 2823 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.35
Abca1P41233 Gjb1-202ENSMUST00000119080 1513 ntAPPRIS P1 TSL 3 BASIC12.89□□□□□ -0.35
Abca1P41233 Snx9-201ENSMUST00000002436 2411 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Abca1P41233 Adam9-202ENSMUST00000084035 3985 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Abca1P41233 Ptpn2-201ENSMUST00000025420 1568 ntAPPRIS P3 TSL 1 (best) BASIC12.89□□□□□ -0.35
Abca1P41233 Arl5c-201ENSMUST00000042971 1571 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Abca1P41233 Uck2-202ENSMUST00000053686 4731 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Abca1P41233 Gstt2-201ENSMUST00000038257 1370 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Abca1P41233 Snx8-204ENSMUST00000196130 2547 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Abca1P41233 Phykpl-201ENSMUST00000020625 1609 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Abca1P41233 Dok3-202ENSMUST00000223563 1644 ntAPPRIS P1 BASIC12.89□□□□□ -0.35
Abca1P41233 Lhpp-201ENSMUST00000033241 1612 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Abca1P41233 Letmd1-201ENSMUST00000037001 2579 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Abca1P41233 Esrrb-201ENSMUST00000021680 2136 ntAPPRIS P1 TSL 5 BASIC12.89□□□□□ -0.35
Abca1P41233 Pick1-206ENSMUST00000166155 1699 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Abca1P41233 Cd164-201ENSMUST00000019962 2922 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Abca1P41233 Sptb-201ENSMUST00000021458 10394 ntAPPRIS P2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Abca1P41233 Camsap3-201ENSMUST00000057028 4450 ntAPPRIS P3 TSL 1 (best) BASIC12.89□□□□□ -0.35
Abca1P41233 Strn4-201ENSMUST00000019220 3535 ntAPPRIS P4 TSL 1 (best) BASIC12.89□□□□□ -0.35
Abca1P41233 Mir22hg-202ENSMUST00000149940 1752 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Abca1P41233 Phkg2-202ENSMUST00000121004 1840 ntAPPRIS P1 TSL 5 BASIC12.89□□□□□ -0.35
Abca1P41233 Ube2l6-201ENSMUST00000102642 1560 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Abca1P41233 Ager-209ENSMUST00000174496 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Abca1P41233 Elp6-205ENSMUST00000199592 1304 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Abca1P41233 Poli-203ENSMUST00000159389 2662 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Abca1P41233 Fnip2-201ENSMUST00000076136 3775 ntAPPRIS P2 TSL 5 BASIC12.89□□□□□ -0.35
Abca1P41233 Tmed1-201ENSMUST00000034698 1378 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Abca1P41233 Neu1-201ENSMUST00000007253 2474 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Abca1P41233 Tmem214-201ENSMUST00000114716 2220 ntAPPRIS ALT2 TSL 5 BASIC12.89□□□□□ -0.35
Abca1P41233 Foxo3-201ENSMUST00000056974 2889 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Abca1P41233 Fam221a-201ENSMUST00000060561 2730 ntAPPRIS P3 TSL 1 (best) BASIC12.89□□□□□ -0.35
Abca1P41233 Yipf4-201ENSMUST00000024873 2133 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Abca1P41233 Cacnb4-201ENSMUST00000078324 8225 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Abca1P41233 Agpat1-201ENSMUST00000037489 2190 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Abca1P41233 Jade2-202ENSMUST00000109090 6230 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Abca1P41233 Gm42901-201ENSMUST00000197735 3171 ntBASIC12.88□□□□□ -0.35
Abca1P41233 Dnaaf3-201ENSMUST00000094897 2224 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Abca1P41233 Tmem253-201ENSMUST00000100638 1234 ntAPPRIS P2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Abca1P41233 Cdkn1a-203ENSMUST00000122348 857 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Abca1P41233 Gm11767-201ENSMUST00000129379 493 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Abca1P41233 Psmg3-202ENSMUST00000182602 733 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Abca1P41233 Klk15-201ENSMUST00000068625 845 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Abca1P41233 Atf6b-202ENSMUST00000173984 2315 ntAPPRIS ALT2 TSL 5 BASIC12.88□□□□□ -0.35
Abca1P41233 Tox2-205ENSMUST00000165937 1675 ntAPPRIS P2 TSL 5 BASIC12.88□□□□□ -0.35
Abca1P41233 Elavl3-203ENSMUST00000215901 3037 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Abca1P41233 Qprt-201ENSMUST00000032912 2050 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Abca1P41233 Htr3a-201ENSMUST00000003826 2082 ntAPPRIS P2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Abca1P41233 Phf21b-203ENSMUST00000159939 3639 ntAPPRIS P2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Abca1P41233 Dennd5b-201ENSMUST00000111557 9831 ntAPPRIS P1 TSL 5 BASIC12.88□□□□□ -0.35
Abca1P41233 Gm26891-201ENSMUST00000181644 2599 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Abca1P41233 Cdc27-202ENSMUST00000106961 1863 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Abca1P41233 Galnt13-202ENSMUST00000112634 7639 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Abca1P41233 Ppif-201ENSMUST00000022419 1549 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Abca1P41233 Chaf1b-201ENSMUST00000023666 1922 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Abca1P41233 Gm13111-201ENSMUST00000136217 3542 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Abca1P41233 Sgcd-201ENSMUST00000077221 1617 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Abca1P41233 AC132265.1-201ENSMUST00000219233 1665 ntBASIC12.88□□□□□ -0.35
Abca1P41233 Apoa5-202ENSMUST00000121598 2515 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Abca1P41233 Commd5-202ENSMUST00000109793 920 ntAPPRIS P1 TSL 5 BASIC12.88□□□□□ -0.35
Abca1P41233 Ms4a6d-202ENSMUST00000125291 679 ntTSL 3 BASIC12.88□□□□□ -0.35
Abca1P41233 1810062O18Rik-203ENSMUST00000129237 647 ntTSL 5 BASIC12.88□□□□□ -0.35
Abca1P41233 Gm16151-201ENSMUST00000129696 639 ntTSL 3 BASIC12.88□□□□□ -0.35
Abca1P41233 Edn3-203ENSMUST00000140908 731 ntAPPRIS ALT2 TSL 5 BASIC12.88□□□□□ -0.35
Abca1P41233 1700003M07Rik-202ENSMUST00000147634 564 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Abca1P41233 Ptgis-201ENSMUST00000018113 2107 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Abca1P41233 A430093F15Rik-205ENSMUST00000188480 509 ntTSL 3 BASIC12.88□□□□□ -0.35
Retrieved 100 of 76,532 protein–RNA pairs in 24.3 ms