Protein–RNA interactions for Protein: P40240

Cd9, CD9 antigen, mousemouse

Predictions only

Length 226 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cd9P40240 Gins4-201ENSMUST00000033950 1349 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Cd9P40240 2210406O10Rik-201ENSMUST00000044964 937 ntTSL 5 BASIC15.3■□□□□ 0.04
Cd9P40240 Nf2-201ENSMUST00000053079 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Cd9P40240 Chmp2a-201ENSMUST00000005711 949 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Cd9P40240 Hoga1-201ENSMUST00000081714 1668 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Cd9P40240 Nectin3-202ENSMUST00000023335 9116 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Cd9P40240 Cbx8-201ENSMUST00000026663 3580 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Cd9P40240 Ablim2-202ENSMUST00000101280 3042 ntTSL 5 BASIC15.3■□□□□ 0.04
Cd9P40240 Fam214a-202ENSMUST00000170846 4355 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
Cd9P40240 Insc-201ENSMUST00000117543 2170 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
Cd9P40240 Hdgfl1-201ENSMUST00000055915 1993 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
Cd9P40240 Gm16976-202ENSMUST00000127408 1515 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Cd9P40240 Pitx2-206ENSMUST00000174623 1493 ntTSL 2 BASIC15.29■□□□□ 0.04
Cd9P40240 Gm3928-201ENSMUST00000121141 1307 ntBASIC15.29■□□□□ 0.04
Cd9P40240 Zbtb4-201ENSMUST00000108638 2552 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Cd9P40240 Gm25990-201ENSMUST00000102440 86 ntBASIC15.29■□□□□ 0.04
Cd9P40240 9130204K15Rik-201ENSMUST00000131441 867 ntTSL 5 BASIC15.29■□□□□ 0.04
Cd9P40240 Abhd18-206ENSMUST00000203650 797 ntTSL 5 BASIC15.29■□□□□ 0.04
Cd9P40240 AC110091.2-202ENSMUST00000216718 1148 ntTSL 5 BASIC15.29■□□□□ 0.04
Cd9P40240 D830030K20Rik-204ENSMUST00000225885 1142 ntBASIC15.29■□□□□ 0.04
Cd9P40240 Cort-201ENSMUST00000030815 677 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Cd9P40240 Prdx6-201ENSMUST00000051925 959 ntTSL 2 BASIC15.29■□□□□ 0.04
Cd9P40240 Rps4l-201ENSMUST00000071745 943 ntBASIC15.29■□□□□ 0.04
Cd9P40240 Trappc5-201ENSMUST00000044857 2546 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Cd9P40240 Glb1-201ENSMUST00000063042 2396 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Cd9P40240 Safb-207ENSMUST00000182533 3122 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
Cd9P40240 Sec24a-203ENSMUST00000109092 2094 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Cd9P40240 Dffb-201ENSMUST00000030893 2093 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Cd9P40240 Zmynd11-204ENSMUST00000110635 3881 ntTSL 5 BASIC15.29■□□□□ 0.04
Cd9P40240 Gm45293-201ENSMUST00000209754 1812 ntBASIC15.29■□□□□ 0.04
Cd9P40240 Eif2ak3-201ENSMUST00000034093 4513 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Cd9P40240 Dnajc25-201ENSMUST00000095070 4023 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Cd9P40240 4933434E20Rik-203ENSMUST00000068798 1500 ntTSL 5 BASIC15.28■□□□□ 0.04
Cd9P40240 Kif5b-201ENSMUST00000025083 6032 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Cd9P40240 Zfp109-203ENSMUST00000206960 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Cd9P40240 Avl9-201ENSMUST00000031805 6670 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Cd9P40240 Gm10584-201ENSMUST00000207036 2628 ntBASIC15.28■□□□□ 0.04
Cd9P40240 Gm10814-201ENSMUST00000180505 1933 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Cd9P40240 Gpr142-202ENSMUST00000106584 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Cd9P40240 Fhad1os2-201ENSMUST00000152351 945 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Cd9P40240 Gm18489-201ENSMUST00000172565 551 ntBASIC15.28■□□□□ 0.04
Cd9P40240 Hmgb1-rs17-201ENSMUST00000210634 972 ntBASIC15.28■□□□□ 0.04
Cd9P40240 Gpr142-201ENSMUST00000045319 1098 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
Cd9P40240 Capn1-201ENSMUST00000025891 3100 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Cd9P40240 Lamp2-201ENSMUST00000016678 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Cd9P40240 Adamts19-201ENSMUST00000052907 4666 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Cd9P40240 1600014C10Rik-208ENSMUST00000179525 2326 ntTSL 2 BASIC15.28■□□□□ 0.04
Cd9P40240 Sept4-201ENSMUST00000018544 1726 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Cd9P40240 Ppef2-201ENSMUST00000031359 2274 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Cd9P40240 Wipi1-201ENSMUST00000047186 3338 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Cd9P40240 Fgfr4-201ENSMUST00000005452 3324 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Cd9P40240 Exoc6-201ENSMUST00000066439 2729 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Cd9P40240 Esco1-203ENSMUST00000115864 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Cd9P40240 Tal1-201ENSMUST00000030489 4213 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Cd9P40240 Stard7-202ENSMUST00000110375 3116 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Cd9P40240 Prrt2-201ENSMUST00000159916 2501 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.04
Cd9P40240 March8-201ENSMUST00000079012 4450 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Cd9P40240 Tbc1d2-202ENSMUST00000107750 1941 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Cd9P40240 E230016M11Rik-201ENSMUST00000130657 1764 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Cd9P40240 1810041L15Rik-203ENSMUST00000189248 5296 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Cd9P40240 Gypc-203ENSMUST00000174459 2180 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.04
Cd9P40240 Nfs1-202ENSMUST00000109600 709 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Cd9P40240 Slbp-205ENSMUST00000139518 1191 ntAPPRIS ALT2 TSL 2 BASIC15.27■□□□□ 0.04
Cd9P40240 1700023H06Rik-201ENSMUST00000161006 1044 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Cd9P40240 Gm45091-201ENSMUST00000205799 504 ntTSL 3 BASIC15.27■□□□□ 0.04
Cd9P40240 CT009510.1-201ENSMUST00000227972 270 ntBASIC15.27■□□□□ 0.04
Cd9P40240 Mgst3-201ENSMUST00000028005 1097 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Cd9P40240 Sdhc-201ENSMUST00000081560 815 ntTSL 3 BASIC15.27■□□□□ 0.04
Cd9P40240 Fam219a-201ENSMUST00000108049 3296 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
Cd9P40240 Ofd1-201ENSMUST00000049501 4453 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Cd9P40240 Dnajc2-203ENSMUST00000115193 2416 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
Cd9P40240 Coch-202ENSMUST00000164782 2681 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Cd9P40240 Clgn-202ENSMUST00000109831 2293 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Cd9P40240 Kat2a-201ENSMUST00000006973 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.03
Cd9P40240 Fmnl3-201ENSMUST00000081224 4137 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.03
Cd9P40240 Zfp202-203ENSMUST00000168832 3329 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
Cd9P40240 G2e3-202ENSMUST00000119211 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.03
Cd9P40240 App-203ENSMUST00000226801 3299 ntAPPRIS ALT2 BASIC15.27■□□□□ 0.03
Cd9P40240 Gpr3-202ENSMUST00000105911 2518 ntAPPRIS P1 BASIC15.26■□□□□ 0.03
Cd9P40240 Slc35f4-205ENSMUST00000146164 2480 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Cd9P40240 Nlk-201ENSMUST00000142739 4444 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Cd9P40240 Fbxl7-201ENSMUST00000059204 4632 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Cd9P40240 Gal3st1-203ENSMUST00000109981 1600 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Cd9P40240 Sntb2-201ENSMUST00000047425 3225 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Cd9P40240 Rabggta-205ENSMUST00000227061 2882 ntAPPRIS P1 BASIC15.26■□□□□ 0.03
Cd9P40240 Nov-201ENSMUST00000050027 2869 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Cd9P40240 Pemt-203ENSMUST00000102693 961 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Cd9P40240 Gm11764-201ENSMUST00000120221 623 ntBASIC15.26■□□□□ 0.03
Cd9P40240 Umpk-ps-201ENSMUST00000211897 827 ntBASIC15.26■□□□□ 0.03
Cd9P40240 Pspn-201ENSMUST00000002740 474 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Cd9P40240 Ctage5-213ENSMUST00000176464 4434 ntTSL 5 BASIC15.26■□□□□ 0.03
Cd9P40240 Aqp5-202ENSMUST00000169082 1551 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Cd9P40240 1700051A21Rik-201ENSMUST00000147937 1516 ntTSL 5 BASIC15.26■□□□□ 0.03
Cd9P40240 Bbs10-201ENSMUST00000040454 2744 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
Cd9P40240 Fam174b-201ENSMUST00000107456 2683 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Cd9P40240 Efnb3-201ENSMUST00000004036 3183 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Cd9P40240 Ppfia3-207ENSMUST00000211067 4565 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
Cd9P40240 Col13a1-205ENSMUST00000105454 3162 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Cd9P40240 Mms22l-202ENSMUST00000108222 4478 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
Cd9P40240 Ttc9c-201ENSMUST00000088092 1585 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 28.8 ms