Protein–RNA interactions for Protein: P40201

Chd1, Chromodomain-helicase-DNA-binding protein 1, mousemouse

Predictions only

Length 1,711 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd1P40201 Schip1-201ENSMUST00000029346 2201 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
Chd1P40201 Cdc23-201ENSMUST00000025228 2084 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
Chd1P40201 Apip-201ENSMUST00000011055 919 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
Chd1P40201 Gm15806-201ENSMUST00000120696 955 ntBASIC23.19■■□□□ 1.3
Chd1P40201 Gm7820-201ENSMUST00000121012 1052 ntBASIC23.19■■□□□ 1.3
Chd1P40201 Rps15-ps2-201ENSMUST00000121788 438 ntBASIC23.19■■□□□ 1.3
Chd1P40201 Apoa5-203ENSMUST00000213878 727 ntTSL 3 BASIC23.19■■□□□ 1.3
Chd1P40201 Rps6kb2-201ENSMUST00000025749 1864 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
Chd1P40201 Ipp-201ENSMUST00000030461 2115 ntAPPRIS P1 TSL 5 BASIC23.19■■□□□ 1.3
Chd1P40201 Mkrn3-201ENSMUST00000094340 2547 ntAPPRIS P1 BASIC23.19■■□□□ 1.3
Chd1P40201 Cep83-201ENSMUST00000020212 3639 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
Chd1P40201 Mir1247-201ENSMUST00000116706 82 ntBASIC23.19■■□□□ 1.3
Chd1P40201 Tbx3os1-203ENSMUST00000140101 490 ntTSL 3 BASIC23.19■■□□□ 1.3
Chd1P40201 Ube2i-211ENSMUST00000173713 890 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
Chd1P40201 Mrpl30-205ENSMUST00000193673 662 ntAPPRIS P1 TSL 2 BASIC23.19■■□□□ 1.3
Chd1P40201 Spata33-205ENSMUST00000212523 486 ntTSL 3 BASIC23.19■■□□□ 1.3
Chd1P40201 AC099934.3-201ENSMUST00000223192 1147 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
Chd1P40201 Emc4-201ENSMUST00000028551 983 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
Chd1P40201 Gm9200-201ENSMUST00000118513 1354 ntBASIC23.19■■□□□ 1.3
Chd1P40201 Dhrs4-201ENSMUST00000022821 1392 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
Chd1P40201 Zfp683-201ENSMUST00000105884 1471 ntAPPRIS P1 TSL 5 BASIC23.19■■□□□ 1.3
Chd1P40201 Spdya-201ENSMUST00000064420 1877 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
Chd1P40201 4930447C04Rik-202ENSMUST00000110489 1988 ntAPPRIS ALT2 TSL 5 BASIC23.19■■□□□ 1.3
Chd1P40201 Hoxb4-201ENSMUST00000049241 2566 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
Chd1P40201 Plppr2-203ENSMUST00000190387 2608 ntAPPRIS P2 TSL 1 (best) BASIC23.18■■□□□ 1.3
Chd1P40201 Cep55-203ENSMUST00000169673 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC23.18■■□□□ 1.3
Chd1P40201 Sybu-203ENSMUST00000110269 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC23.18■■□□□ 1.3
Chd1P40201 Trim31-201ENSMUST00000078438 2257 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
Chd1P40201 Nfe2-207ENSMUST00000134554 1761 ntAPPRIS P1 TSL 2 BASIC23.18■■□□□ 1.3
Chd1P40201 Zc3hc1-210ENSMUST00000152391 1673 ntTSL 5 BASIC23.18■■□□□ 1.3
Chd1P40201 Npdc1-202ENSMUST00000071442 1485 ntAPPRIS P2 TSL 1 (best) BASIC23.18■■□□□ 1.3
Chd1P40201 Ube2j2-206ENSMUST00000118192 922 ntTSL 5 BASIC23.18■■□□□ 1.3
Chd1P40201 Gm9002-201ENSMUST00000178437 499 ntBASIC23.18■■□□□ 1.3
Chd1P40201 Mpv17-203ENSMUST00000200833 1171 ntTSL 5 BASIC23.18■■□□□ 1.3
Chd1P40201 Zfp936-202ENSMUST00000200973 578 ntTSL 3 BASIC23.18■■□□□ 1.3
Chd1P40201 Gm44756-201ENSMUST00000206172 1069 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
Chd1P40201 AC155286.1-201ENSMUST00000218632 448 ntBASIC23.18■■□□□ 1.3
Chd1P40201 Prdm8-201ENSMUST00000112959 4553 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
Chd1P40201 Cbfb-203ENSMUST00000109394 2487 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
Chd1P40201 Nsd3-207ENSMUST00000143445 2416 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
Chd1P40201 Opn4-202ENSMUST00000168444 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC23.18■■□□□ 1.3
Chd1P40201 3110082I17Rik-204ENSMUST00000198474 2030 ntTSL 2 BASIC23.18■■□□□ 1.3
Chd1P40201 Oas1g-201ENSMUST00000086368 1977 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
Chd1P40201 Surf4-201ENSMUST00000015011 3281 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
Chd1P40201 4930556H04Rik-201ENSMUST00000222451 1675 ntBASIC23.17■■□□□ 1.3
Chd1P40201 Fgf13-203ENSMUST00000119833 2237 ntTSL 5 BASIC23.17■■□□□ 1.3
Chd1P40201 Tpm3-205ENSMUST00000121503 1139 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
Chd1P40201 1700012C14Rik-201ENSMUST00000132023 498 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
Chd1P40201 Gm11535-201ENSMUST00000145517 778 ntTSL 3 BASIC23.17■■□□□ 1.3
Chd1P40201 Gm27631-201ENSMUST00000184163 466 ntBASIC23.17■■□□□ 1.3
Chd1P40201 Gm9229-201ENSMUST00000222777 126 ntBASIC23.17■■□□□ 1.3
Chd1P40201 Ndufa4l2-201ENSMUST00000035735 934 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
Chd1P40201 Scgb3a2-201ENSMUST00000043803 842 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
Chd1P40201 Acvrl1-204ENSMUST00000120028 1932 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
Chd1P40201 Irf7-201ENSMUST00000026571 1916 ntAPPRIS P3 TSL 1 (best) BASIC23.17■■□□□ 1.3
Chd1P40201 Cdk11b-202ENSMUST00000105598 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC23.17■■□□□ 1.3
Chd1P40201 Acbd5-206ENSMUST00000155602 1714 ntAPPRIS ALT2 TSL 2 BASIC23.17■■□□□ 1.3
Chd1P40201 Yars2-204ENSMUST00000159962 2805 ntTSL 2 BASIC23.17■■□□□ 1.3
Chd1P40201 Snx1-201ENSMUST00000034946 2073 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
Chd1P40201 Gm12390-201ENSMUST00000117897 397 ntBASIC23.16■■□□□ 1.3
Chd1P40201 Mir1894-201ENSMUST00000122802 81 ntBASIC23.16■■□□□ 1.3
Chd1P40201 Gp9-201ENSMUST00000032133 881 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
Chd1P40201 Frmd5-203ENSMUST00000121219 2262 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
Chd1P40201 Rnf224-202ENSMUST00000205192 1707 ntAPPRIS P1 BASIC23.16■■□□□ 1.3
Chd1P40201 Tmem82-201ENSMUST00000053263 1671 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
Chd1P40201 Zfp326-201ENSMUST00000031227 2667 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
Chd1P40201 Wisp3-201ENSMUST00000076713 1419 ntAPPRIS P1 TSL 5 BASIC23.16■■□□□ 1.3
Chd1P40201 Plod1-202ENSMUST00000105712 1059 ntTSL 2 BASIC23.16■■□□□ 1.3
Chd1P40201 1700049J03Rik-201ENSMUST00000011196 421 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
Chd1P40201 Boll-202ENSMUST00000114423 1106 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
Chd1P40201 Tmem109-207ENSMUST00000147699 1096 ntTSL 2 BASIC23.16■■□□□ 1.3
Chd1P40201 Pax5-213ENSMUST00000173821 996 ntTSL 5 BASIC23.16■■□□□ 1.3
Chd1P40201 1700122O11Rik-201ENSMUST00000178823 771 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
Chd1P40201 Gm15294-202ENSMUST00000182079 366 ntAPPRIS P1 BASIC23.16■■□□□ 1.3
Chd1P40201 Gm26953-206ENSMUST00000212840 619 ntTSL 5 BASIC23.16■■□□□ 1.3
Chd1P40201 Gabra5-202ENSMUST00000206382 2607 ntAPPRIS P1 TSL 5 BASIC23.16■■□□□ 1.3
Chd1P40201 Plk1-201ENSMUST00000033154 2199 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
Chd1P40201 9530082P21Rik-202ENSMUST00000181291 1798 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
Chd1P40201 Sirt3-202ENSMUST00000106048 1416 ntAPPRIS P2 TSL 1 (best) BASIC23.15■■□□□ 1.3
Chd1P40201 Degs1-201ENSMUST00000035295 2048 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
Chd1P40201 Socs6-203ENSMUST00000125362 2814 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
Chd1P40201 Apoo-203ENSMUST00000113897 1218 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
Chd1P40201 Gm13226-201ENSMUST00000117838 404 ntBASIC23.15■■□□□ 1.3
Chd1P40201 Ldha-ps-201ENSMUST00000119390 995 ntBASIC23.15■■□□□ 1.3
Chd1P40201 Mir6392-201ENSMUST00000184924 108 ntBASIC23.15■■□□□ 1.3
Chd1P40201 Gm7067-201ENSMUST00000207698 1249 ntBASIC23.15■■□□□ 1.3
Chd1P40201 Rhox2e-201ENSMUST00000072167 799 ntAPPRIS P1 TSL 5 BASIC23.15■■□□□ 1.3
Chd1P40201 Gm5356-201ENSMUST00000093326 615 ntBASIC23.15■■□□□ 1.3
Chd1P40201 Polr2g-201ENSMUST00000096261 868 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
Chd1P40201 Utp4-201ENSMUST00000047629 2232 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
Chd1P40201 Klhdc8b-210ENSMUST00000193895 2718 ntAPPRIS P1 TSL 5 BASIC23.15■■□□□ 1.3
Chd1P40201 Alx1-208ENSMUST00000219194 1695 ntAPPRIS P1 TSL 5 BASIC23.15■■□□□ 1.3
Chd1P40201 Gm26526-201ENSMUST00000181075 2927 ntTSL 5 BASIC23.15■■□□□ 1.3
Chd1P40201 H2-K1-201ENSMUST00000025181 1605 ntAPPRIS P3 TSL 1 (best) BASIC23.15■■□□□ 1.3
Chd1P40201 Sirt1-207ENSMUST00000177694 3353 ntTSL 5 BASIC23.14■■□□□ 1.3
Chd1P40201 Tex30-211ENSMUST00000150911 960 ntAPPRIS P1 TSL 2 BASIC23.14■■□□□ 1.3
Chd1P40201 Snora78-201ENSMUST00000158630 128 ntBASIC23.14■■□□□ 1.3
Chd1P40201 Ilkap-208ENSMUST00000187306 377 ntTSL 5 BASIC23.14■■□□□ 1.3
Chd1P40201 Smyd3-207ENSMUST00000194237 1047 ntTSL 2 BASIC23.14■■□□□ 1.3
Chd1P40201 1700123K08Rik-201ENSMUST00000031501 1047 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.3
Retrieved 100 of 76,532 protein–RNA pairs in 36.1 ms