Protein–RNA interactions for Protein: P39749

Fen1, Flap endonuclease 1, mousemouse

Predictions only

Length 378 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Fen1P39749 Chd1-205ENSMUST00000173311 4211 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Fen1P39749 Dnaja1-210ENSMUST00000164233 5622 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
Fen1P39749 Ptprs-202ENSMUST00000086828 5608 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Fen1P39749 Kat5-201ENSMUST00000113641 2008 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Fen1P39749 Zbtb46-205ENSMUST00000180222 2014 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Fen1P39749 Ss18l1-201ENSMUST00000041126 4343 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Fen1P39749 Casp8-201ENSMUST00000027189 2585 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
Fen1P39749 Rogdi-207ENSMUST00000202281 1355 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Fen1P39749 Smpd5-202ENSMUST00000163991 1823 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Fen1P39749 2210408F21Rik-208ENSMUST00000144612 450 ntTSL 3 BASIC15.67■□□□□ 0.1
Fen1P39749 Ankrd40-201ENSMUST00000021227 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Fen1P39749 Dcxr-201ENSMUST00000026144 892 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Fen1P39749 Hist3h2ba-201ENSMUST00000078267 614 ntAPPRIS P1 BASIC15.67■□□□□ 0.1
Fen1P39749 Ldlrad1-201ENSMUST00000094916 1093 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
Fen1P39749 Wnk1-223ENSMUST00000177761 11303 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
Fen1P39749 Tbl1xr1-203ENSMUST00000193734 8237 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Fen1P39749 Spdya-201ENSMUST00000064420 1877 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Fen1P39749 Dmrtb1-201ENSMUST00000069271 1861 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
Fen1P39749 Myod1-201ENSMUST00000072514 1861 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Fen1P39749 Fam71a-201ENSMUST00000171798 2234 ntAPPRIS P1 BASIC15.67■□□□□ 0.1
Fen1P39749 Vps51-204ENSMUST00000159832 3048 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
Fen1P39749 Cant1-201ENSMUST00000017620 4182 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Fen1P39749 Zkscan3-201ENSMUST00000070785 2561 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Fen1P39749 Iqgap1-201ENSMUST00000167377 7444 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Fen1P39749 Pcdha11-202ENSMUST00000115657 5360 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Fen1P39749 Ncs1-201ENSMUST00000000199 4653 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Fen1P39749 Rgs9-202ENSMUST00000103062 1743 ntTSL 5 BASIC15.66■□□□□ 0.1
Fen1P39749 Syn1-202ENSMUST00000115345 3261 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Fen1P39749 Pgc-201ENSMUST00000024782 1388 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Fen1P39749 Prrg2-208ENSMUST00000210690 1623 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Fen1P39749 Adamts7-201ENSMUST00000113059 5379 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
Fen1P39749 Esr1-202ENSMUST00000105588 2733 ntTSL 5 BASIC15.66■□□□□ 0.1
Fen1P39749 Gm16731-201ENSMUST00000132432 922 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Fen1P39749 Rfesd-202ENSMUST00000167271 595 ntAPPRIS P1 TSL 2 BASIC15.66■□□□□ 0.1
Fen1P39749 Nme3-201ENSMUST00000024978 715 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Fen1P39749 Hbegf-201ENSMUST00000025363 2373 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Fen1P39749 Tnfaip8l1-201ENSMUST00000077788 2379 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Fen1P39749 Il9r-204ENSMUST00000142396 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Fen1P39749 Dok3-201ENSMUST00000047877 1546 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Fen1P39749 Hyou1-204ENSMUST00000160902 3374 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
Fen1P39749 Pcdhgc4-203ENSMUST00000195239 2272 ntTSL 3 BASIC15.66■□□□□ 0.1
Fen1P39749 Nap1l4-209ENSMUST00000209098 2281 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Fen1P39749 Eif4g1-204ENSMUST00000115460 5638 ntAPPRIS P3 TSL 5 BASIC15.66■□□□□ 0.1
Fen1P39749 Dcaf17-201ENSMUST00000064141 1905 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Fen1P39749 Gm43352-201ENSMUST00000196419 3065 ntBASIC15.66■□□□□ 0.1
Fen1P39749 Enah-212ENSMUST00000195059 2832 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Fen1P39749 Sorbs1-225ENSMUST00000226047 2582 ntAPPRIS ALT2 BASIC15.66■□□□□ 0.1
Fen1P39749 Trip10-202ENSMUST00000224152 1812 ntAPPRIS ALT2 BASIC15.66■□□□□ 0.1
Fen1P39749 H2-K1-205ENSMUST00000172912 1570 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Fen1P39749 Spg21-202ENSMUST00000213957 1302 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Fen1P39749 Elmo2-203ENSMUST00000094329 3466 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Fen1P39749 Tns1-222ENSMUST00000212888 5643 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
Fen1P39749 Arsi-201ENSMUST00000040359 2975 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Fen1P39749 Olah-202ENSMUST00000115087 1479 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Fen1P39749 Rnf146-201ENSMUST00000037548 4402 ntAPPRIS P1 TSL 2 BASIC15.65■□□□□ 0.1
Fen1P39749 Dgki-203ENSMUST00000101532 4596 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
Fen1P39749 Mettl7a1-201ENSMUST00000067752 1883 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Fen1P39749 Sorbs1-208ENSMUST00000224247 2688 ntAPPRIS ALT2 BASIC15.65■□□□□ 0.1
Fen1P39749 Mettl21a-202ENSMUST00000114079 2030 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Fen1P39749 Arhgef1-201ENSMUST00000047873 3212 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Fen1P39749 Ptprv-210ENSMUST00000183317 6108 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Fen1P39749 Medag-201ENSMUST00000093110 2953 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Fen1P39749 Ralgds-203ENSMUST00000113893 3683 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Fen1P39749 Gjd2-201ENSMUST00000090275 2879 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Fen1P39749 Pigb-207ENSMUST00000184389 2079 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Fen1P39749 Arrdc4-202ENSMUST00000118110 1129 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Fen1P39749 Smim1-205ENSMUST00000131325 842 ntTSL 5 BASIC15.65■□□□□ 0.1
Fen1P39749 Gm11973-203ENSMUST00000155498 867 ntTSL 3 BASIC15.65■□□□□ 0.1
Fen1P39749 Ankrd39-202ENSMUST00000194894 664 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Fen1P39749 Fuz-209ENSMUST00000208179 1164 ntTSL 5 BASIC15.65■□□□□ 0.1
Fen1P39749 Synj2-210ENSMUST00000115791 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Fen1P39749 Gm37305-201ENSMUST00000195714 4279 ntBASIC15.65■□□□□ 0.1
Fen1P39749 Pld4-201ENSMUST00000063888 1982 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Fen1P39749 Unc5d-202ENSMUST00000209401 3081 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Fen1P39749 Unc5d-203ENSMUST00000210298 3060 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Fen1P39749 Unc5d-205ENSMUST00000211448 3087 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Fen1P39749 Tm9sf1-203ENSMUST00000121791 2148 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
Fen1P39749 Abraxas1-202ENSMUST00000055245 2139 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Fen1P39749 Neu4-202ENSMUST00000190212 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Fen1P39749 Pbk-201ENSMUST00000022612 1720 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Fen1P39749 Cacna2d3-201ENSMUST00000022567 3695 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Fen1P39749 Wnt10b-206ENSMUST00000228546 2709 ntBASIC15.65■□□□□ 0.1
Fen1P39749 Arid3a-203ENSMUST00000105377 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Fen1P39749 Hmga1b-201ENSMUST00000105046 1626 ntAPPRIS P1 BASIC15.65■□□□□ 0.1
Fen1P39749 Fbxo41-202ENSMUST00000161078 6562 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Fen1P39749 Cnot7-206ENSMUST00000135269 2461 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Fen1P39749 Mef2d-204ENSMUST00000119251 3488 ntTSL 5 BASIC15.64■□□□□ 0.1
Fen1P39749 Syt3-201ENSMUST00000118831 2627 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.1
Fen1P39749 Prelid1-201ENSMUST00000021942 2644 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.1
Fen1P39749 Fhl3-201ENSMUST00000038684 1664 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Fen1P39749 Hs3st1-201ENSMUST00000053116 1684 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Fen1P39749 Sidt2-201ENSMUST00000038488 4248 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Fen1P39749 Phospho2-202ENSMUST00000112266 2194 ntAPPRIS P1 TSL 3 BASIC15.64■□□□□ 0.09
Fen1P39749 Gm8668-201ENSMUST00000120559 1447 ntBASIC15.64■□□□□ 0.09
Fen1P39749 Serf1-205ENSMUST00000152286 465 ntTSL 3 BASIC15.64■□□□□ 0.09
Fen1P39749 Psme2-208ENSMUST00000161807 962 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Fen1P39749 Vkorc1-203ENSMUST00000206053 606 ntTSL 3 BASIC15.64■□□□□ 0.09
Fen1P39749 Gm45442-201ENSMUST00000210038 411 ntTSL 3 BASIC15.64■□□□□ 0.09
Fen1P39749 Casp6-201ENSMUST00000029626 1456 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Fen1P39749 Mpst-203ENSMUST00000169133 1309 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.09
Retrieved 100 of 76,532 protein–RNA pairs in 52.3 ms