Protein–RNA interactions for Protein: P39038

Cdh4, Cadherin-4, mousemouse

Predictions only

Length 913 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh4P39038 A4galt-202ENSMUST00000164614 2128 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Cdh4P39038 Ankle2-206ENSMUST00000197188 4077 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
Cdh4P39038 Denr-201ENSMUST00000023869 2339 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Cdh4P39038 Galnt17-202ENSMUST00000160609 2875 ntTSL 5 BASIC14.86□□□□□ -0.03
Cdh4P39038 Dennd1a-201ENSMUST00000102787 4342 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Cdh4P39038 Nipal2-201ENSMUST00000040791 4331 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Cdh4P39038 Dnajb11-204ENSMUST00000166487 2534 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Cdh4P39038 Prmt6-203ENSMUST00000190378 3051 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Cdh4P39038 Foxc2-201ENSMUST00000054691 2725 ntAPPRIS P1 BASIC14.86□□□□□ -0.03
Cdh4P39038 Cgrrf1-204ENSMUST00000140114 419 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Cdh4P39038 Fbxo17-205ENSMUST00000167118 861 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
Cdh4P39038 H2-T-ps-201ENSMUST00000172538 1067 ntBASIC14.86□□□□□ -0.03
Cdh4P39038 H2-Bl-201ENSMUST00000173080 1138 ntAPPRIS P5 TSL 1 (best) BASIC14.86□□□□□ -0.03
Cdh4P39038 H2-Bl-204ENSMUST00000184502 862 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Cdh4P39038 Syce1l-204ENSMUST00000212269 753 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Cdh4P39038 Il17b-201ENSMUST00000025471 692 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Cdh4P39038 Aurkaip1-201ENSMUST00000084097 1159 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Cdh4P39038 Rundc3b-201ENSMUST00000047485 3677 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
Cdh4P39038 Pax8-201ENSMUST00000028355 2560 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Cdh4P39038 Tdg-201ENSMUST00000092266 2959 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Cdh4P39038 Crb2-201ENSMUST00000050372 6372 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
Cdh4P39038 Gm12355-201ENSMUST00000104933 1311 ntAPPRIS P1 BASIC14.86□□□□□ -0.03
Cdh4P39038 Lcat-201ENSMUST00000038896 1342 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Cdh4P39038 Ctnna2-204ENSMUST00000160894 4162 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Cdh4P39038 AC131104.1-201ENSMUST00000222118 1739 ntTSL 5 BASIC14.86□□□□□ -0.03
Cdh4P39038 Dera-201ENSMUST00000087675 1729 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Cdh4P39038 Cyp2ab1-201ENSMUST00000023513 2720 ntTSL 5 BASIC14.86□□□□□ -0.03
Cdh4P39038 Chgb-201ENSMUST00000028826 2740 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Cdh4P39038 Raet1e-204ENSMUST00000181645 1579 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Cdh4P39038 Gstz1-205ENSMUST00000222885 1571 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Cdh4P39038 Crhbp-202ENSMUST00000221025 1779 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Cdh4P39038 Sh2b1-201ENSMUST00000032978 3393 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
Cdh4P39038 Matn1-201ENSMUST00000102576 2001 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Cdh4P39038 Nfkbid-202ENSMUST00000108175 2000 ntAPPRIS P2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Cdh4P39038 Smpd4-221ENSMUST00000170996 1619 ntTSL 5 BASIC14.85□□□□□ -0.03
Cdh4P39038 Rabl2-201ENSMUST00000023294 1640 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Cdh4P39038 Utp3-201ENSMUST00000090413 1629 ntAPPRIS P1 BASIC14.85□□□□□ -0.03
Cdh4P39038 Eif5a-207ENSMUST00000108610 1409 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Cdh4P39038 Gm37500-201ENSMUST00000192059 1443 ntBASIC14.85□□□□□ -0.03
Cdh4P39038 Fbxl3-206ENSMUST00000145693 3352 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Cdh4P39038 Slc25a32-201ENSMUST00000022908 5905 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Cdh4P39038 Chchd7-203ENSMUST00000119307 889 ntAPPRIS P1 TSL 2 BASIC14.85□□□□□ -0.03
Cdh4P39038 Gm16183-201ENSMUST00000127527 1193 ntTSL 5 BASIC14.85□□□□□ -0.03
Cdh4P39038 Frs3os-201ENSMUST00000136531 978 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Cdh4P39038 Gm7230-201ENSMUST00000173026 815 ntBASIC14.85□□□□□ -0.03
Cdh4P39038 Bag2-203ENSMUST00000187602 378 ntTSL 2 BASIC14.85□□□□□ -0.03
Cdh4P39038 Gm28411-202ENSMUST00000191318 464 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Cdh4P39038 Gm10060-201ENSMUST00000212002 111 ntBASIC14.85□□□□□ -0.03
Cdh4P39038 Csrp2-207ENSMUST00000220409 780 ntTSL 2 BASIC14.85□□□□□ -0.03
Cdh4P39038 AC133598.3-202ENSMUST00000224219 531 ntBASIC14.85□□□□□ -0.03
Cdh4P39038 Ndufb9-201ENSMUST00000022980 704 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Cdh4P39038 Spag16-201ENSMUST00000065425 2126 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Cdh4P39038 Tef-201ENSMUST00000023024 4079 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Cdh4P39038 Tead3-206ENSMUST00000156862 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Cdh4P39038 Myc-202ENSMUST00000159327 2186 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Cdh4P39038 Prr15-201ENSMUST00000059138 1511 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Cdh4P39038 Psmd8-201ENSMUST00000059642 1540 ntAPPRIS P2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Cdh4P39038 Kctd15-203ENSMUST00000108070 2409 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Cdh4P39038 Kcnq2-217ENSMUST00000149964 8209 ntAPPRIS P2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Cdh4P39038 Sybu-202ENSMUST00000110267 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Cdh4P39038 Slc35a1-201ENSMUST00000029970 2039 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Cdh4P39038 Mbtps2-201ENSMUST00000058098 4797 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Cdh4P39038 Zfp12-201ENSMUST00000032591 5265 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Cdh4P39038 Fbxo31-201ENSMUST00000059018 4358 ntAPPRIS P2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Cdh4P39038 Ccbe1-202ENSMUST00000130300 1631 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Cdh4P39038 Inhbc-201ENSMUST00000026472 1859 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Cdh4P39038 Spdya-201ENSMUST00000064420 1877 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Cdh4P39038 Ralgapa2-211ENSMUST00000228797 8245 ntAPPRIS ALT2 BASIC14.84□□□□□ -0.03
Cdh4P39038 Tmem150b-202ENSMUST00000086364 2822 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Cdh4P39038 Cdcp1-201ENSMUST00000039229 5310 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Cdh4P39038 Snn-201ENSMUST00000089011 2902 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Cdh4P39038 Elp6-201ENSMUST00000068071 2219 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Cdh4P39038 Ubl5-204ENSMUST00000160682 489 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
Cdh4P39038 Rbm14-203ENSMUST00000180008 370 ntTSL 5 BASIC14.84□□□□□ -0.03
Cdh4P39038 Lrr1-203ENSMUST00000222520 767 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Cdh4P39038 Lce3c-201ENSMUST00000055375 567 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Cdh4P39038 Tap1-201ENSMUST00000041633 2614 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Cdh4P39038 Gm3928-201ENSMUST00000121141 1307 ntBASIC14.84□□□□□ -0.03
Cdh4P39038 Cacnb4-201ENSMUST00000078324 8225 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Cdh4P39038 Kitl-202ENSMUST00000105283 5648 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Cdh4P39038 Anks1-203ENSMUST00000114842 5610 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
Cdh4P39038 Dap3-202ENSMUST00000107491 1375 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Cdh4P39038 0610010F05Rik-203ENSMUST00000109532 4106 ntAPPRIS P2 TSL 5 BASIC14.84□□□□□ -0.03
Cdh4P39038 Pde4d-208ENSMUST00000120671 2455 ntTSL 5 BASIC14.84□□□□□ -0.03
Cdh4P39038 Gstt2-201ENSMUST00000038257 1370 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Cdh4P39038 Ptprt-202ENSMUST00000109442 7719 ntAPPRIS ALT2 TSL 5 BASIC14.84□□□□□ -0.03
Cdh4P39038 Sgta-202ENSMUST00000218208 1964 ntAPPRIS ALT1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Cdh4P39038 Tfap2a-206ENSMUST00000224665 1958 ntAPPRIS ALT1 BASIC14.84□□□□□ -0.03
Cdh4P39038 Tmem183a-201ENSMUST00000049470 3149 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
Cdh4P39038 Pald1-201ENSMUST00000020289 4282 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
Cdh4P39038 BC024978-204ENSMUST00000179391 1748 ntAPPRIS P3 TSL 5 BASIC14.83□□□□□ -0.03
Cdh4P39038 Pqlc3-208ENSMUST00000222203 1706 ntTSL 5 BASIC14.83□□□□□ -0.03
Cdh4P39038 Pex12-205ENSMUST00000175741 2337 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
Cdh4P39038 Asf1b-201ENSMUST00000005607 1788 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
Cdh4P39038 Men1-201ENSMUST00000056391 2975 ntAPPRIS P2 TSL 1 (best) BASIC14.83□□□□□ -0.03
Cdh4P39038 Plekha4-207ENSMUST00000211227 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Cdh4P39038 Gm15173-201ENSMUST00000122049 433 ntBASIC14.83□□□□□ -0.04
Cdh4P39038 4930477E14Rik-201ENSMUST00000181412 621 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Cdh4P39038 Gm27646-201ENSMUST00000183989 110 ntBASIC14.83□□□□□ -0.04
Cdh4P39038 Gm9449-201ENSMUST00000207265 1011 ntBASIC14.83□□□□□ -0.04
Retrieved 100 of 76,532 protein–RNA pairs in 26.8 ms