Protein–RNA interactions for Protein: P35951

Ldlr, Low-density lipoprotein receptor, mousemouse

Predictions only

Length 862 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LdlrP35951 Adam23-204ENSMUST00000114103 2655 ntAPPRIS ALT2 TSL 5 BASIC15.47■□□□□ 0.07
LdlrP35951 Acsl3-201ENSMUST00000035779 3950 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
LdlrP35951 Arhgef25-201ENSMUST00000019611 2218 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
LdlrP35951 Supt5-208ENSMUST00000209141 3755 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
LdlrP35951 Caln1-203ENSMUST00000111288 9327 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
LdlrP35951 Lmnb2-202ENSMUST00000105332 1643 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
LdlrP35951 4930474N05Rik-203ENSMUST00000226305 2313 ntAPPRIS P1 BASIC15.46■□□□□ 0.07
LdlrP35951 Tle3-218ENSMUST00000178113 5205 ntTSL 5 BASIC15.46■□□□□ 0.07
LdlrP35951 Wt1-202ENSMUST00000111099 2441 ntTSL 5 BASIC15.46■□□□□ 0.07
LdlrP35951 Vps37c-201ENSMUST00000087951 2415 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
LdlrP35951 D1Pas1-201ENSMUST00000045108 3212 ntAPPRIS P1 BASIC15.46■□□□□ 0.07
LdlrP35951 Anks1b-202ENSMUST00000099366 2549 ntTSL 5 BASIC15.46■□□□□ 0.07
LdlrP35951 Babam1-201ENSMUST00000002473 1433 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
LdlrP35951 1700052K11Rik-201ENSMUST00000190120 3708 ntBASIC15.46■□□□□ 0.07
LdlrP35951 Mettl22-201ENSMUST00000046470 1825 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
LdlrP35951 Gm13034-201ENSMUST00000121342 3177 ntBASIC15.46■□□□□ 0.07
LdlrP35951 Bex1-203ENSMUST00000113120 718 ntAPPRIS P1 TSL 3 BASIC15.46■□□□□ 0.07
LdlrP35951 Gm27459-201ENSMUST00000184860 107 ntBASIC15.46■□□□□ 0.07
LdlrP35951 CAAA01066804.1-201ENSMUST00000217800 611 ntTSL 3 BASIC15.46■□□□□ 0.07
LdlrP35951 CT009713.7-201ENSMUST00000224689 571 ntBASIC15.46■□□□□ 0.07
LdlrP35951 3110040N11Rik-201ENSMUST00000026092 887 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
LdlrP35951 Ppib-201ENSMUST00000034947 892 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
LdlrP35951 Stard7-201ENSMUST00000110374 1530 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
LdlrP35951 Hspa1a-201ENSMUST00000087328 2967 ntAPPRIS P1 BASIC15.46■□□□□ 0.07
LdlrP35951 H2afy2-201ENSMUST00000020283 2175 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
LdlrP35951 Coq6-202ENSMUST00000110276 1776 ntAPPRIS P2 TSL 5 BASIC15.46■□□□□ 0.07
LdlrP35951 Mfsd10-203ENSMUST00000114331 1754 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
LdlrP35951 Pcdha9-201ENSMUST00000115659 5341 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
LdlrP35951 Rpl3l-202ENSMUST00000170239 1375 ntAPPRIS P1 TSL 5 BASIC15.46■□□□□ 0.07
LdlrP35951 Cmtm3-201ENSMUST00000034343 1616 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
LdlrP35951 P3h1-204ENSMUST00000121111 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.06
LdlrP35951 4930512B01Rik-201ENSMUST00000021378 1856 ntTSL 1 (best) BASIC15.46■□□□□ 0.06
LdlrP35951 Pptc7-202ENSMUST00000119015 2233 ntAPPRIS ALT2 TSL 1 (best) BASIC15.45■□□□□ 0.06
LdlrP35951 Meis2-204ENSMUST00000110906 3229 ntTSL 2 BASIC15.45■□□□□ 0.06
LdlrP35951 Acbd5-203ENSMUST00000114526 3725 ntAPPRIS P4 TSL 1 (best) BASIC15.45■□□□□ 0.06
LdlrP35951 Tm6sf2-201ENSMUST00000049197 1418 ntAPPRIS P3 TSL 1 (best) BASIC15.45■□□□□ 0.06
LdlrP35951 Etnk2-203ENSMUST00000135222 2297 ntAPPRIS P2 TSL 1 (best) BASIC15.45■□□□□ 0.06
LdlrP35951 6430548M08Rik-201ENSMUST00000034281 5564 ntAPPRIS P3 TSL 1 (best) BASIC15.45■□□□□ 0.06
LdlrP35951 Grin1os-201ENSMUST00000129723 2891 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
LdlrP35951 Cgrrf1-204ENSMUST00000140114 419 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
LdlrP35951 Syngr2-206ENSMUST00000177131 935 ntAPPRIS ALT2 TSL 3 BASIC15.45■□□□□ 0.06
LdlrP35951 Lce1k-201ENSMUST00000179917 663 ntAPPRIS P1 TSL 2 BASIC15.45■□□□□ 0.06
LdlrP35951 Mir6404-201ENSMUST00000183699 94 ntBASIC15.45■□□□□ 0.06
LdlrP35951 4933412L11Rik-201ENSMUST00000203702 1044 ntBASIC15.45■□□□□ 0.06
LdlrP35951 1810010D01Rik-204ENSMUST00000208788 889 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
LdlrP35951 Hist1h2ad-201ENSMUST00000090776 572 ntAPPRIS P1 BASIC15.45■□□□□ 0.06
LdlrP35951 Sgpp1-202ENSMUST00000220285 3200 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
LdlrP35951 Gm29340-201ENSMUST00000188763 3854 ntBASIC15.44■□□□□ 0.06
LdlrP35951 Rai1-201ENSMUST00000064190 7348 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
LdlrP35951 Vav1-204ENSMUST00000169220 2810 ntAPPRIS ALT2 TSL 1 (best) BASIC15.44■□□□□ 0.06
LdlrP35951 Emx2-201ENSMUST00000062216 2916 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
LdlrP35951 Adgrd2-ps-201ENSMUST00000118797 2662 ntBASIC15.44■□□□□ 0.06
LdlrP35951 1600014C10Rik-208ENSMUST00000179525 2326 ntTSL 2 BASIC15.44■□□□□ 0.06
LdlrP35951 Cryzl1-201ENSMUST00000073466 1965 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
LdlrP35951 Gdpd2-202ENSMUST00000113744 2427 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
LdlrP35951 Nipal2-201ENSMUST00000040791 4331 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
LdlrP35951 Hoxb1-201ENSMUST00000019117 2086 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
LdlrP35951 Rnf111-201ENSMUST00000034739 4880 ntAPPRIS P2 TSL 1 (best) BASIC15.44■□□□□ 0.06
LdlrP35951 Lrig2-207ENSMUST00000199070 5991 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
LdlrP35951 Brsk2-202ENSMUST00000075528 2160 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
LdlrP35951 Gm26762-201ENSMUST00000180864 5284 ntTSL 5 BASIC15.44■□□□□ 0.06
LdlrP35951 Fam219a-201ENSMUST00000108049 3296 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
LdlrP35951 Klc1-203ENSMUST00000120544 2261 ntAPPRIS ALT1 TSL 5 BASIC15.44■□□□□ 0.06
LdlrP35951 Unc93b1-203ENSMUST00000162708 2266 ntAPPRIS P3 TSL 1 (best) BASIC15.44■□□□□ 0.06
LdlrP35951 Kxd1-202ENSMUST00000117580 696 ntTSL 5 BASIC15.44■□□□□ 0.06
LdlrP35951 Gm15794-201ENSMUST00000120182 631 ntBASIC15.44■□□□□ 0.06
LdlrP35951 Gm25925-201ENSMUST00000158314 306 ntBASIC15.44■□□□□ 0.06
LdlrP35951 Gm6257-201ENSMUST00000163864 910 ntBASIC15.44■□□□□ 0.06
LdlrP35951 Prr3-202ENSMUST00000165613 767 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
LdlrP35951 Gm28577-201ENSMUST00000176106 741 ntTSL 5 BASIC15.44■□□□□ 0.06
LdlrP35951 Gm26871-202ENSMUST00000180774 695 ntTSL 2 BASIC15.44■□□□□ 0.06
LdlrP35951 Gm38186-201ENSMUST00000192574 449 ntTSL 3 BASIC15.44■□□□□ 0.06
LdlrP35951 Usp4-201ENSMUST00000035237 3662 ntAPPRIS P3 TSL 1 (best) BASIC15.44■□□□□ 0.06
LdlrP35951 Skor1-201ENSMUST00000055281 3657 ntAPPRIS P3 TSL 1 (best) BASIC15.44■□□□□ 0.06
LdlrP35951 Stk40-202ENSMUST00000116286 3860 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
LdlrP35951 Ltbp1-201ENSMUST00000001927 6671 ntTSL 5 BASIC15.44■□□□□ 0.06
LdlrP35951 Selenok-201ENSMUST00000112268 1678 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
LdlrP35951 Gpd2-202ENSMUST00000112618 5759 ntTSL 5 BASIC15.44■□□□□ 0.06
LdlrP35951 Ifngr2-201ENSMUST00000023687 3254 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
LdlrP35951 Tmem8b-203ENSMUST00000107866 4998 ntTSL 5 BASIC15.44■□□□□ 0.06
LdlrP35951 Zfp451-201ENSMUST00000019861 3958 ntAPPRIS P3 TSL 1 (best) BASIC15.43■□□□□ 0.06
LdlrP35951 Fbln1-202ENSMUST00000109432 2273 ntAPPRIS ALT2 TSL 1 (best) BASIC15.43■□□□□ 0.06
LdlrP35951 Zfx-204ENSMUST00000113927 6933 ntAPPRIS P1 TSL 5 BASIC15.43■□□□□ 0.06
LdlrP35951 Mier2-212ENSMUST00000172158 1400 ntTSL 5 BASIC15.43■□□□□ 0.06
LdlrP35951 Ccdc69-201ENSMUST00000055040 1402 ntAPPRIS P2 TSL 1 (best) BASIC15.43■□□□□ 0.06
LdlrP35951 6430548M08Rik-204ENSMUST00000108951 5531 ntAPPRIS ALT2 TSL 1 (best) BASIC15.43■□□□□ 0.06
LdlrP35951 Atf4-201ENSMUST00000109605 1724 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
LdlrP35951 Agbl5-202ENSMUST00000114700 3296 ntAPPRIS ALT2 TSL 1 (best) BASIC15.43■□□□□ 0.06
LdlrP35951 Usp30-201ENSMUST00000031588 4604 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
LdlrP35951 Nkain2-203ENSMUST00000191234 3760 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
LdlrP35951 Gm21887-202ENSMUST00000179760 483 ntAPPRIS ALT2 TSL 5 BASIC15.43■□□□□ 0.06
LdlrP35951 Mir8098-201ENSMUST00000184011 137 ntBASIC15.43■□□□□ 0.06
LdlrP35951 AW822252-206ENSMUST00000208904 237 ntBASIC15.43■□□□□ 0.06
LdlrP35951 Lce3c-201ENSMUST00000055375 567 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
LdlrP35951 Cldn19-201ENSMUST00000084309 924 ntAPPRIS P4 TSL 1 (best) BASIC15.43■□□□□ 0.06
LdlrP35951 Ubl7-201ENSMUST00000163329 1364 ntAPPRIS P1 TSL 5 BASIC15.43■□□□□ 0.06
LdlrP35951 Mir124-2hg-202ENSMUST00000186746 1368 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
LdlrP35951 Sybu-209ENSMUST00000228639 4113 ntBASIC15.43■□□□□ 0.06
LdlrP35951 Stk11-202ENSMUST00000105370 1474 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
LdlrP35951 Col11a2-201ENSMUST00000087497 6048 ntAPPRIS P2 TSL 2 BASIC15.43■□□□□ 0.06
Retrieved 100 of 76,532 protein–RNA pairs in 61.4 ms