Protein–RNA interactions for Protein: P35546

Ret, Proto-oncogene tyrosine-protein kinase receptor Ret, mousemouse

Predictions only

Length 1,115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RetP35546 Mvd-201ENSMUST00000006692 1756 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
RetP35546 Asic1-205ENSMUST00000228185 1818 ntBASIC14.55□□□□□ -0.08
RetP35546 Syt6-202ENSMUST00000117221 4394 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
RetP35546 P3h1-201ENSMUST00000030393 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
RetP35546 Hdac2-202ENSMUST00000105510 3250 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
RetP35546 Gm26761-201ENSMUST00000180650 2192 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
RetP35546 Mdga1-208ENSMUST00000171691 8339 ntAPPRIS ALT2 TSL 5 BASIC14.54□□□□□ -0.08
RetP35546 Lrrc56-203ENSMUST00000084446 2390 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
RetP35546 Kri1-205ENSMUST00000184326 2490 ntAPPRIS ALT2 TSL 5 BASIC14.54□□□□□ -0.08
RetP35546 Zmym3-201ENSMUST00000063577 6057 ntAPPRIS P2 TSL 1 (best) BASIC14.54□□□□□ -0.08
RetP35546 Clvs2-201ENSMUST00000019920 2717 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
RetP35546 Micall1-201ENSMUST00000040320 6701 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
RetP35546 Cuedc1-201ENSMUST00000018522 3180 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
RetP35546 Rffl-206ENSMUST00000108173 3489 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
RetP35546 Tmem65-201ENSMUST00000072113 3747 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
RetP35546 Gm7230-201ENSMUST00000173026 815 ntBASIC14.54□□□□□ -0.08
RetP35546 Gm42670-201ENSMUST00000201816 1292 ntBASIC14.54□□□□□ -0.08
RetP35546 Ten1-201ENSMUST00000021130 902 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
RetP35546 AC154621.1-201ENSMUST00000226155 1119 ntBASIC14.54□□□□□ -0.08
RetP35546 Atp6v0b-201ENSMUST00000036380 1000 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
RetP35546 Gm17018-201ENSMUST00000047057 1345 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
RetP35546 Arpc1b-211ENSMUST00000196111 1394 ntAPPRIS ALT1 TSL 1 (best) BASIC14.54□□□□□ -0.08
RetP35546 Zfp800-202ENSMUST00000115320 4311 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
RetP35546 Bud23-201ENSMUST00000071677 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
RetP35546 Sytl1-202ENSMUST00000105908 1730 ntTSL 5 BASIC14.54□□□□□ -0.08
RetP35546 Shank1-201ENSMUST00000107934 6477 ntAPPRIS ALT2 TSL 5 BASIC14.54□□□□□ -0.08
RetP35546 Wnt5b-201ENSMUST00000117171 2174 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
RetP35546 Cpne6-203ENSMUST00000165262 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC14.54□□□□□ -0.08
RetP35546 Tead3-206ENSMUST00000156862 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
RetP35546 Rarg-202ENSMUST00000063339 2718 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
RetP35546 App-207ENSMUST00000227737 2827 ntBASIC14.54□□□□□ -0.08
RetP35546 Arntl2-204ENSMUST00000111639 2923 ntAPPRIS P3 TSL 5 BASIC14.54□□□□□ -0.08
RetP35546 Med15-202ENSMUST00000080936 3263 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
RetP35546 Fbxo31-201ENSMUST00000059018 4358 ntAPPRIS P2 TSL 1 (best) BASIC14.54□□□□□ -0.08
RetP35546 Adcy3-207ENSMUST00000152065 4728 ntAPPRIS ALT1 TSL 1 (best) BASIC14.54□□□□□ -0.08
RetP35546 Ttll5-201ENSMUST00000040179 5081 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
RetP35546 Adgrb2-205ENSMUST00000106017 5104 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
RetP35546 Col11a2-201ENSMUST00000087497 6048 ntAPPRIS P2 TSL 2 BASIC14.53□□□□□ -0.08
RetP35546 Pi4k2b-202ENSMUST00000031082 3034 ntAPPRIS ALT2 TSL 2 BASIC14.53□□□□□ -0.08
RetP35546 Hspa1b-201ENSMUST00000172753 2803 ntAPPRIS P1 BASIC14.53□□□□□ -0.08
RetP35546 Fem1b-201ENSMUST00000034775 6785 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
RetP35546 Tmem56-203ENSMUST00000128909 6696 ntAPPRIS P2 TSL 1 (best) BASIC14.53□□□□□ -0.08
RetP35546 Cfap97-202ENSMUST00000110376 2043 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
RetP35546 Gm25990-201ENSMUST00000102440 86 ntBASIC14.53□□□□□ -0.08
RetP35546 Aig1-202ENSMUST00000105534 617 ntTSL 5 BASIC14.53□□□□□ -0.08
RetP35546 Get4-202ENSMUST00000110878 1180 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
RetP35546 Cnbp-202ENSMUST00000113617 952 ntTSL 5 BASIC14.53□□□□□ -0.08
RetP35546 Gm15173-201ENSMUST00000122049 433 ntBASIC14.53□□□□□ -0.08
RetP35546 Tmem208-201ENSMUST00000015000 785 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
RetP35546 Gm25745-201ENSMUST00000174945 133 ntBASIC14.53□□□□□ -0.08
RetP35546 Gm4535-201ENSMUST00000182274 558 ntBASIC14.53□□□□□ -0.08
RetP35546 Gm26646-202ENSMUST00000205705 439 ntTSL 5 BASIC14.53□□□□□ -0.08
RetP35546 Gm40849-201ENSMUST00000222330 603 ntTSL 3 BASIC14.53□□□□□ -0.08
RetP35546 Rangrf-201ENSMUST00000038644 820 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
RetP35546 Gm10355-201ENSMUST00000097146 517 ntBASIC14.53□□□□□ -0.08
RetP35546 Pfkfb4-203ENSMUST00000198140 3488 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
RetP35546 Pip4k2a-201ENSMUST00000006912 3477 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
RetP35546 Igdcc3-203ENSMUST00000217371 3183 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
RetP35546 Ttll11-202ENSMUST00000112976 3077 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
RetP35546 Cog8-201ENSMUST00000034391 2954 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
RetP35546 Nlk-201ENSMUST00000142739 4444 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
RetP35546 Tpm3-202ENSMUST00000118566 2190 ntTSL 5 BASIC14.53□□□□□ -0.08
RetP35546 Erf-201ENSMUST00000045847 3505 ntAPPRIS P2 TSL 1 (best) BASIC14.53□□□□□ -0.08
RetP35546 Tcf3-203ENSMUST00000105339 2096 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
RetP35546 Dnase2a-202ENSMUST00000109744 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
RetP35546 Rnf220-203ENSMUST00000102690 1842 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
RetP35546 Il11ra1-202ENSMUST00000108040 1837 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.08
RetP35546 Celf1-206ENSMUST00000111451 4678 ntAPPRIS ALT1 TSL 5 BASIC14.52□□□□□ -0.08
RetP35546 Kri1-201ENSMUST00000038671 2598 ntAPPRIS P2 TSL 1 (best) BASIC14.52□□□□□ -0.08
RetP35546 Cyp2w1-201ENSMUST00000031521 1512 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.08
RetP35546 Chrm4-201ENSMUST00000045537 1440 ntAPPRIS P1 BASIC14.52□□□□□ -0.08
RetP35546 Sfmbt1-201ENSMUST00000054230 7837 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.08
RetP35546 Rbm3-206ENSMUST00000115621 1338 ntAPPRIS ALT1 TSL 1 (best) BASIC14.52□□□□□ -0.08
RetP35546 Qdpr-204ENSMUST00000120867 1234 ntTSL 5 BASIC14.52□□□□□ -0.09
RetP35546 Gm12999-201ENSMUST00000124471 485 ntTSL 2 BASIC14.52□□□□□ -0.09
RetP35546 Tpt1-205ENSMUST00000142061 996 ntTSL 5 BASIC14.52□□□□□ -0.09
RetP35546 Lats1-202ENSMUST00000165952 7209 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
RetP35546 Gm26768-201ENSMUST00000181097 966 ntTSL 5 BASIC14.52□□□□□ -0.09
RetP35546 Ap2s1-204ENSMUST00000205607 372 ntTSL 3 BASIC14.52□□□□□ -0.09
RetP35546 Gm16845-202ENSMUST00000216270 567 ntTSL 2 BASIC14.52□□□□□ -0.09
RetP35546 AC164441.1-201ENSMUST00000221369 1004 ntTSL 5 BASIC14.52□□□□□ -0.09
RetP35546 Fam26f-201ENSMUST00000062784 1094 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
RetP35546 Gm3248-201ENSMUST00000163885 2055 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.09
RetP35546 Tnip2-202ENSMUST00000087737 1987 ntAPPRIS P2 TSL 1 (best) BASIC14.52□□□□□ -0.09
RetP35546 Mettl7a1-201ENSMUST00000067752 1883 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
RetP35546 Mrps27-201ENSMUST00000052249 1849 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
RetP35546 Fam222b-202ENSMUST00000100782 2473 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
RetP35546 Jakmip1-202ENSMUST00000121010 2496 ntTSL 5 BASIC14.52□□□□□ -0.09
RetP35546 Gm43598-201ENSMUST00000202482 2479 ntBASIC14.52□□□□□ -0.09
RetP35546 Acss3-201ENSMUST00000044668 2494 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
RetP35546 Stpg1-201ENSMUST00000063707 2380 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
RetP35546 CT010456.1-201ENSMUST00000222465 1688 ntTSL 5 BASIC14.52□□□□□ -0.09
RetP35546 Pofut2-201ENSMUST00000020493 2290 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
RetP35546 Pcdha9-201ENSMUST00000115659 5341 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
RetP35546 Wnk2-207ENSMUST00000159559 6584 ntAPPRIS ALT2 TSL 5 BASIC14.51□□□□□ -0.09
RetP35546 Cdkl3-209ENSMUST00000120374 2770 ntAPPRIS ALT2 TSL 5 BASIC14.51□□□□□ -0.09
RetP35546 Cyp21a1-201ENSMUST00000025223 2058 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
RetP35546 Tmx4-203ENSMUST00000110120 2602 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
RetP35546 Gm27528-202ENSMUST00000222916 2012 ntBASIC14.51□□□□□ -0.09
RetP35546 Gm8909-203ENSMUST00000173353 1428 ntAPPRIS ALT2 TSL 5 BASIC14.51□□□□□ -0.09
Retrieved 100 of 76,532 protein–RNA pairs in 57.5 ms