Protein–RNA interactions for Protein: P35276

Rab3d, Ras-related protein Rab-3D, mousemouse

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rab3dP35276 Itsn1-202ENSMUST00000064797 7418 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.33
Rab3dP35276 Dok3-201ENSMUST00000047877 1546 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Rab3dP35276 Slc43a3-201ENSMUST00000090726 2583 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Rab3dP35276 Synm-202ENSMUST00000074233 7818 ntAPPRIS P4 TSL 1 (best) BASIC13.02□□□□□ -0.33
Rab3dP35276 Fgfr1op2-203ENSMUST00000067404 2766 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Rab3dP35276 Lipo3-202ENSMUST00000112508 2839 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Rab3dP35276 Hsp90b1-201ENSMUST00000020238 2825 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Rab3dP35276 Pcbp3-206ENSMUST00000168465 1748 ntAPPRIS P3 TSL 5 BASIC13.02□□□□□ -0.33
Rab3dP35276 2210011K15Rik-201ENSMUST00000190690 1741 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Rab3dP35276 Camsap2-202ENSMUST00000192001 6329 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Rab3dP35276 Plscr3-202ENSMUST00000108632 1835 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Rab3dP35276 Ydjc-203ENSMUST00000115706 3097 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Rab3dP35276 Tarsl2-201ENSMUST00000032728 3192 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Rab3dP35276 Fbxo5-201ENSMUST00000019907 1940 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Rab3dP35276 Fam151a-201ENSMUST00000047620 1923 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Rab3dP35276 Arid4b-203ENSMUST00000110534 5864 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Rab3dP35276 Pgap2-203ENSMUST00000120119 1979 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Rab3dP35276 Tmc8-203ENSMUST00000117781 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Rab3dP35276 Gm45546-201ENSMUST00000211053 2394 ntBASIC13.01□□□□□ -0.33
Rab3dP35276 Dnajc2-203ENSMUST00000115193 2416 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Rab3dP35276 Traf7-210ENSMUST00000176353 2503 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Rab3dP35276 Ncf1-201ENSMUST00000016094 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Rab3dP35276 Spock1-203ENSMUST00000185905 2794 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Rab3dP35276 Ptger1-201ENSMUST00000019608 4694 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Rab3dP35276 A330035P11Rik-202ENSMUST00000144926 3074 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Rab3dP35276 Gpt2-201ENSMUST00000034136 3639 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Rab3dP35276 Aprt-204ENSMUST00000212093 723 ntTSL 2 BASIC13.01□□□□□ -0.33
Rab3dP35276 Pabpn1l-202ENSMUST00000212966 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Rab3dP35276 Ripply2-201ENSMUST00000058846 503 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Rab3dP35276 Plpp1-202ENSMUST00000070951 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Rab3dP35276 Rpl27-201ENSMUST00000077856 614 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Rab3dP35276 Nptn-212ENSMUST00000177292 1390 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
Rab3dP35276 Emd-201ENSMUST00000002029 1595 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Rab3dP35276 Clip2-201ENSMUST00000036999 4893 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Rab3dP35276 4921539H07Rik-202ENSMUST00000200072 1665 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Rab3dP35276 Zdhhc6-209ENSMUST00000225495 1711 ntBASIC13.01□□□□□ -0.33
Rab3dP35276 Mcrs1-201ENSMUST00000041190 1915 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Rab3dP35276 E430024P14Rik-202ENSMUST00000160177 2050 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Rab3dP35276 Gjb6-201ENSMUST00000039380 2105 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Rab3dP35276 Krt2-201ENSMUST00000023712 2613 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Rab3dP35276 Bbs10-201ENSMUST00000040454 2744 ntAPPRIS P1 TSL 2 BASIC13.01□□□□□ -0.33
Rab3dP35276 Hyou1-204ENSMUST00000160902 3374 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
Rab3dP35276 Bag6-202ENSMUST00000166426 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Rab3dP35276 Mfrp-205ENSMUST00000206308 4037 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
Rab3dP35276 Sirpa-202ENSMUST00000099113 3342 ntTSL 3 BASIC13□□□□□ -0.33
Rab3dP35276 Arsi-201ENSMUST00000040359 2975 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Rab3dP35276 Prrt2-201ENSMUST00000159916 2501 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
Rab3dP35276 Mdm1-202ENSMUST00000163238 2461 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Rab3dP35276 Tsc2-217ENSMUST00000227745 5598 ntAPPRIS ALT2 BASIC13□□□□□ -0.33
Rab3dP35276 Loxl2-201ENSMUST00000022660 5316 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Rab3dP35276 Erp29-203ENSMUST00000130451 5204 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Rab3dP35276 Rasd1-201ENSMUST00000062405 1611 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Rab3dP35276 Mapk9-201ENSMUST00000020634 4675 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
Rab3dP35276 Serp1-201ENSMUST00000029385 4611 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Rab3dP35276 Stk11-202ENSMUST00000105370 1474 ntTSL 1 (best) BASIC13□□□□□ -0.33
Rab3dP35276 Wdfy3-206ENSMUST00000174698 3858 ntTSL 1 (best) BASIC13□□□□□ -0.33
Rab3dP35276 Ccdc107-202ENSMUST00000107922 865 ntAPPRIS ALT2 TSL 2 BASIC13□□□□□ -0.33
Rab3dP35276 Gorasp2-203ENSMUST00000112205 1196 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Rab3dP35276 4930526A20Rik-201ENSMUST00000134228 941 ntBASIC13□□□□□ -0.33
Rab3dP35276 Cenps-207ENSMUST00000177408 689 ntTSL 2 BASIC13□□□□□ -0.33
Rab3dP35276 Gm3375-201ENSMUST00000203929 796 ntBASIC13□□□□□ -0.33
Rab3dP35276 Ccdc107-201ENSMUST00000030181 817 ntAPPRIS P2 TSL 1 (best) BASIC13□□□□□ -0.33
Rab3dP35276 Gm37912-201ENSMUST00000191895 3076 ntBASIC13□□□□□ -0.33
Rab3dP35276 Fstl5-201ENSMUST00000038364 5107 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Rab3dP35276 Zfp90-201ENSMUST00000034382 2632 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Rab3dP35276 Daxx-201ENSMUST00000079421 2580 ntAPPRIS P2 TSL 1 (best) BASIC13□□□□□ -0.33
Rab3dP35276 Gopc-201ENSMUST00000020008 4216 ntAPPRIS P2 TSL 1 (best) BASIC13□□□□□ -0.33
Rab3dP35276 Ube2d3-210ENSMUST00000197539 2515 ntAPPRIS P2 TSL 1 (best) BASIC13□□□□□ -0.33
Rab3dP35276 Tmem143-203ENSMUST00000209350 2466 ntTSL 1 (best) BASIC13□□□□□ -0.33
Rab3dP35276 Slc46a3-201ENSMUST00000031655 2434 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Rab3dP35276 Slc39a1-201ENSMUST00000015467 2364 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Rab3dP35276 Epha2-201ENSMUST00000006614 3913 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Rab3dP35276 Rhpn1-202ENSMUST00000121137 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Rab3dP35276 Grwd1-202ENSMUST00000131384 1974 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Rab3dP35276 Synj1-203ENSMUST00000121759 7090 ntAPPRIS P4 TSL 5 BASIC13□□□□□ -0.33
Rab3dP35276 Pygo2-201ENSMUST00000060061 3198 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Rab3dP35276 Mms22l-201ENSMUST00000050446 4261 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Rab3dP35276 Ddx20-201ENSMUST00000090680 2905 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Rab3dP35276 Mamstr-201ENSMUST00000148532 1606 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Rab3dP35276 Sox21-201ENSMUST00000170662 3799 ntAPPRIS P1 BASIC12.99□□□□□ -0.33
Rab3dP35276 Zfp90-203ENSMUST00000212606 2685 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Rab3dP35276 Sdsl-201ENSMUST00000031594 1476 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Rab3dP35276 Dohh-201ENSMUST00000072751 1444 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Rab3dP35276 Ager-201ENSMUST00000015596 1370 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
Rab3dP35276 Arid3a-202ENSMUST00000105376 4892 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
Rab3dP35276 Ppp1r1b-204ENSMUST00000137634 1343 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Rab3dP35276 Plxna1-202ENSMUST00000163139 9034 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Rab3dP35276 C1qtnf5-202ENSMUST00000114816 1259 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Rab3dP35276 Gm12527-201ENSMUST00000117967 564 ntBASIC12.99□□□□□ -0.33
Rab3dP35276 Uba52-203ENSMUST00000125184 711 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Rab3dP35276 H2afz-207ENSMUST00000174561 810 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Rab3dP35276 Gm20695-202ENSMUST00000176233 1012 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
Rab3dP35276 Gm26644-201ENSMUST00000181365 958 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Rab3dP35276 Gm43353-201ENSMUST00000199224 1295 ntBASIC12.99□□□□□ -0.33
Rab3dP35276 Oxld1-201ENSMUST00000044007 813 ntAPPRIS P2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Rab3dP35276 E030030I06Rik-201ENSMUST00000069372 876 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Rab3dP35276 Tmem161a-214ENSMUST00000182980 2080 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Rab3dP35276 Dmxl1-202ENSMUST00000180611 11319 ntAPPRIS P2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Rab3dP35276 Tbc1d4-210ENSMUST00000162617 4762 ntAPPRIS ALT2 TSL 5 BASIC12.99□□□□□ -0.33
Rab3dP35276 Mctp1-204ENSMUST00000125209 4715 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 51.5 ms