Protein–RNA interactions for Protein: P31648

Slc6a1, Sodium- and chloride-dependent GABA transporter 1, mousemouse

Predictions only

Length 599 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc6a1P31648 Gm17182-201ENSMUST00000163795 860 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Slc6a1P31648 Sema6b-202ENSMUST00000167545 3847 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Slc6a1P31648 Lamtor5-202ENSMUST00000199317 743 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Slc6a1P31648 Rab28-205ENSMUST00000202913 863 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Slc6a1P31648 Arpc4-204ENSMUST00000204802 794 ntTSL 3 BASIC13.4□□□□□ -0.26
Slc6a1P31648 Chmp2a-203ENSMUST00000210587 930 ntAPPRIS P1 TSL 3 BASIC13.4□□□□□ -0.26
Slc6a1P31648 Stk11-210ENSMUST00000213772 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Slc6a1P31648 Lysmd2-201ENSMUST00000034702 1189 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Slc6a1P31648 Limd2-202ENSMUST00000064545 798 ntAPPRIS P1 TSL 2 BASIC13.4□□□□□ -0.26
Slc6a1P31648 Olfr464-201ENSMUST00000074874 1084 ntAPPRIS P1 BASIC13.4□□□□□ -0.26
Slc6a1P31648 Foxi1-201ENSMUST00000060271 2357 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Slc6a1P31648 Pcyt1a-202ENSMUST00000104893 4951 ntAPPRIS P1 TSL 5 BASIC13.4□□□□□ -0.26
Slc6a1P31648 Slc7a7-209ENSMUST00000226753 2126 ntAPPRIS P1 BASIC13.4□□□□□ -0.26
Slc6a1P31648 Dgkq-201ENSMUST00000053913 4938 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Slc6a1P31648 Tcf19-203ENSMUST00000161012 1665 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Slc6a1P31648 Dse-201ENSMUST00000048010 4389 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Slc6a1P31648 Mex3c-201ENSMUST00000091852 3738 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Slc6a1P31648 Naa15-201ENSMUST00000029303 6090 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Slc6a1P31648 Pgbd5-201ENSMUST00000052580 2824 ntAPPRIS P2 TSL 5 BASIC13.4□□□□□ -0.27
Slc6a1P31648 Bdkrb1-202ENSMUST00000182899 1313 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
Slc6a1P31648 Bdkrb1-201ENSMUST00000041229 1338 ntAPPRIS P1 BASIC13.39□□□□□ -0.27
Slc6a1P31648 E030042O20Rik-201ENSMUST00000135244 1427 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Slc6a1P31648 Shank3-201ENSMUST00000039074 7131 ntAPPRIS P2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Slc6a1P31648 Klhl11-201ENSMUST00000056665 2393 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Slc6a1P31648 Rad18-201ENSMUST00000068487 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Slc6a1P31648 H2-K1-201ENSMUST00000025181 1605 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
Slc6a1P31648 Cacna1g-201ENSMUST00000021234 8139 ntAPPRIS ALT2 TSL 5 BASIC13.39□□□□□ -0.27
Slc6a1P31648 Barhl2-201ENSMUST00000086795 2314 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Slc6a1P31648 Cxcr5-201ENSMUST00000062215 2614 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Slc6a1P31648 Gm13474-201ENSMUST00000122466 815 ntBASIC13.39□□□□□ -0.27
Slc6a1P31648 Tlx1os-201ENSMUST00000173437 620 ntTSL 3 BASIC13.39□□□□□ -0.27
Slc6a1P31648 Gm7889-201ENSMUST00000185591 958 ntBASIC13.39□□□□□ -0.27
Slc6a1P31648 Casp3-203ENSMUST00000210534 583 ntTSL 5 BASIC13.39□□□□□ -0.27
Slc6a1P31648 Sae1-203ENSMUST00000210999 1254 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Slc6a1P31648 Fitm1-201ENSMUST00000022826 971 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Slc6a1P31648 Dcxr-201ENSMUST00000026144 892 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Slc6a1P31648 Mpc2-201ENSMUST00000027853 1025 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Slc6a1P31648 Gm5414-201ENSMUST00000062879 1659 ntAPPRIS P1 TSL 2 BASIC13.39□□□□□ -0.27
Slc6a1P31648 Arhgef40-216ENSMUST00000182760 5130 ntAPPRIS ALT2 TSL 5 BASIC13.39□□□□□ -0.27
Slc6a1P31648 Hoxb5-201ENSMUST00000049272 1895 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Slc6a1P31648 Lrp4-201ENSMUST00000028689 7926 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Slc6a1P31648 Efcab14-204ENSMUST00000106525 2792 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Slc6a1P31648 Synrg-201ENSMUST00000049714 3995 ntAPPRIS ALT2 TSL 5 BASIC13.39□□□□□ -0.27
Slc6a1P31648 Tmcc3-201ENSMUST00000065060 5530 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Slc6a1P31648 Rnaseh2a-203ENSMUST00000109738 2044 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Slc6a1P31648 Agpat1-208ENSMUST00000174595 1911 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
Slc6a1P31648 Plscr3-201ENSMUST00000019605 1927 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Slc6a1P31648 Prss41-204ENSMUST00000151797 1743 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Slc6a1P31648 Nrxn1-209ENSMUST00000161402 4953 ntTSL 5 BASIC13.39□□□□□ -0.27
Slc6a1P31648 Dgki-203ENSMUST00000101532 4596 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
Slc6a1P31648 Gm26752-201ENSMUST00000181086 1537 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Slc6a1P31648 Gpd1l-201ENSMUST00000084853 1436 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Slc6a1P31648 Anks1b-214ENSMUST00000182356 7561 ntTSL 5 BASIC13.38□□□□□ -0.27
Slc6a1P31648 Cchcr1-202ENSMUST00000164242 2656 ntAPPRIS P2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Slc6a1P31648 Slc25a34-201ENSMUST00000038661 2670 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Slc6a1P31648 Uba3-201ENSMUST00000089287 2257 ntAPPRIS P4 TSL 1 (best) BASIC13.38□□□□□ -0.27
Slc6a1P31648 Riox2-201ENSMUST00000023407 2159 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Slc6a1P31648 Mfsd2a-201ENSMUST00000030408 2151 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Slc6a1P31648 Ankrd13b-202ENSMUST00000092892 3336 ntAPPRIS P2 TSL 5 BASIC13.38□□□□□ -0.27
Slc6a1P31648 Map7d1-203ENSMUST00000122129 3249 ntAPPRIS ALT2 TSL 5 BASIC13.38□□□□□ -0.27
Slc6a1P31648 Endod1-201ENSMUST00000167549 4470 ntAPPRIS P2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Slc6a1P31648 Skp1a-203ENSMUST00000109072 1754 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
Slc6a1P31648 Abhd16b-201ENSMUST00000069649 1775 ntAPPRIS P1 BASIC13.38□□□□□ -0.27
Slc6a1P31648 4921539H07Rik-202ENSMUST00000200072 1665 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Slc6a1P31648 Usp42-201ENSMUST00000053287 5151 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
Slc6a1P31648 Nptn-212ENSMUST00000177292 1390 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
Slc6a1P31648 Gm12085-201ENSMUST00000119263 940 ntBASIC13.38□□□□□ -0.27
Slc6a1P31648 Tmem80-202ENSMUST00000126510 959 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
Slc6a1P31648 Smim1-205ENSMUST00000131325 842 ntTSL 5 BASIC13.38□□□□□ -0.27
Slc6a1P31648 Gm16731-201ENSMUST00000132432 922 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Slc6a1P31648 Slc2a8-204ENSMUST00000153484 1168 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Slc6a1P31648 Ccdc125-202ENSMUST00000170347 1216 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Slc6a1P31648 Gm45058-201ENSMUST00000205810 766 ntBASIC13.38□□□□□ -0.27
Slc6a1P31648 Cnih3-204ENSMUST00000209607 564 ntTSL 5 BASIC13.38□□□□□ -0.27
Slc6a1P31648 Lsm1-203ENSMUST00000211168 343 ntTSL 3 BASIC13.38□□□□□ -0.27
Slc6a1P31648 Mrps28-201ENSMUST00000042148 783 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Slc6a1P31648 Thrsp-201ENSMUST00000043077 1277 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Slc6a1P31648 Cand2-201ENSMUST00000075995 5474 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Slc6a1P31648 Cd151-201ENSMUST00000058746 1619 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Slc6a1P31648 Pigu-201ENSMUST00000077626 1636 ntAPPRIS P2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Slc6a1P31648 Dlat-201ENSMUST00000034567 4035 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Slc6a1P31648 Unc5a-202ENSMUST00000109994 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Slc6a1P31648 Stx5a-201ENSMUST00000010254 1780 ntAPPRIS ALT2 TSL 5 BASIC13.37□□□□□ -0.27
Slc6a1P31648 Slc35b2-202ENSMUST00000223987 1766 ntBASIC13.37□□□□□ -0.27
Slc6a1P31648 Ccnj-202ENSMUST00000119316 3763 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
Slc6a1P31648 Fgfr3-203ENSMUST00000114411 4225 ntAPPRIS ALT2 TSL 5 BASIC13.37□□□□□ -0.27
Slc6a1P31648 Fbxl12-205ENSMUST00000140702 1555 ntBASIC13.37□□□□□ -0.27
Slc6a1P31648 Lcmt2-201ENSMUST00000099486 2047 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Slc6a1P31648 Khdrbs1-201ENSMUST00000066257 3738 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Slc6a1P31648 Glg1-204ENSMUST00000169020 7021 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Slc6a1P31648 Zfand3-201ENSMUST00000057897 2617 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Slc6a1P31648 Eef2kmt-201ENSMUST00000064635 2170 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Slc6a1P31648 March11-203ENSMUST00000152841 1365 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Slc6a1P31648 Hnf4a-202ENSMUST00000109411 4362 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Slc6a1P31648 Arl11-202ENSMUST00000224727 2095 ntAPPRIS P1 BASIC13.37□□□□□ -0.27
Slc6a1P31648 Gm26578-201ENSMUST00000181702 4611 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Slc6a1P31648 Ablim1-204ENSMUST00000111524 1251 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Slc6a1P31648 Gm16061-201ENSMUST00000122167 857 ntBASIC13.37□□□□□ -0.27
Slc6a1P31648 Snrnp48-202ENSMUST00000178564 847 ntTSL 5 BASIC13.37□□□□□ -0.27
Slc6a1P31648 Gm5091-201ENSMUST00000181658 1179 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Retrieved 100 of 76,532 protein–RNA pairs in 39.9 ms